RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
CHD1-206ENST00000511067 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
CHD1-206ENST00000511067 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
CHD1-206ENST00000511067 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
CHD1-206ENST00000511067 SLAIN1Q8ND83 568 aa12.45□□□□□ -0.42
CHD1-206ENST00000511067 PDE4AP27815 886 aa12.44□□□□□ -0.42
CHD1-206ENST00000511067 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
CHD1-206ENST00000511067 E2F4Q16254 413 aa12.43□□□□□ -0.42
CHD1-206ENST00000511067 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
CHD1-206ENST00000511067 CRISPLD2Q9H0B8 497 aa12.43□□□□□ -0.42
CHD1-206ENST00000511067 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
CHD1-206ENST00000511067 MFSD10Q14728 455 aa12.42□□□□□ -0.42
CHD1-206ENST00000511067 G3V3G9 751 aa12.41□□□□□ -0.42
CHD1-206ENST00000511067 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
CHD1-206ENST00000511067 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
CHD1-206ENST00000511067 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
CHD1-206ENST00000511067 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
CHD1-206ENST00000511067 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
CHD1-206ENST00000511067 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
CHD1-206ENST00000511067 ARIH1Q9Y4X5 557 aaPredicted RBP12.33□□□□□ -0.44
CHD1-206ENST00000511067 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
CHD1-206ENST00000511067 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
CHD1-206ENST00000511067 POTEMA6NI47 508 aa12.28□□□□□ -0.44
CHD1-206ENST00000511067 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHD1-206ENST00000511067 MICALL2Q8IY33 904 aa12.28□□□□□ -0.44
CHD1-206ENST00000511067 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
CHD1-206ENST00000511067 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.45
CHD1-206ENST00000511067 SNPHO15079 494 aa12.26□□□□□ -0.45
CHD1-206ENST00000511067 POTEGQ6S5H5 508 aa12.26□□□□□ -0.45
CHD1-206ENST00000511067 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
CHD1-206ENST00000511067 TESPA1A2RU30 521 aaPredicted RBP12.24□□□□□ -0.45
CHD1-206ENST00000511067 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
CHD1-206ENST00000511067 TMEM121BQ9BXQ6 578 aaPredicted RBP12.23□□□□□ -0.45
CHD1-206ENST00000511067 SEMA3EO15041 775 aa12.2□□□□□ -0.46
CHD1-206ENST00000511067 TMC2Q8TDI7 906 aa12.2□□□□□ -0.46
CHD1-206ENST00000511067 ST18O60284 1047 aa12.18□□□□□ -0.46
CHD1-206ENST00000511067 FOXK1P85037 733 aa12.18□□□□□ -0.46
CHD1-206ENST00000511067 SMYD5Q6GMV2 418 aa12.18□□□□□ -0.46
CHD1-206ENST00000511067 DSG2Q14126 1118 aa12.16□□□□□ -0.46
CHD1-206ENST00000511067 KIF3CO14782 793 aa12.13□□□□□ -0.47
CHD1-206ENST00000511067 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
CHD1-206ENST00000511067 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
CHD1-206ENST00000511067 EMILIN3Q9NT22 766 aa12.1□□□□□ -0.47
CHD1-206ENST00000511067 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
CHD1-206ENST00000511067 PDIA6Q15084 440 aa12.08□□□□□ -0.48
CHD1-206ENST00000511067 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
CHD1-206ENST00000511067 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
CHD1-206ENST00000511067 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
CHD1-206ENST00000511067 DPYSL4O14531 572 aa12.06□□□□□ -0.48
CHD1-206ENST00000511067 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
CHD1-206ENST00000511067 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
CHD1-206ENST00000511067 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
CHD1-206ENST00000511067 HOXB3P14651 431 aaPredicted RBP12.01□□□□□ -0.49
CHD1-206ENST00000511067 RIMBP2O15034 1052 aa12□□□□□ -0.49
CHD1-206ENST00000511067 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
CHD1-206ENST00000511067 EMP3P54852 163 aa12□□□□□ -0.49
CHD1-206ENST00000511067 ZMYND10O75800 440 aa11.98□□□□□ -0.49
CHD1-206ENST00000511067 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
CHD1-206ENST00000511067 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
CHD1-206ENST00000511067 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
CHD1-206ENST00000511067 GPIHBP1Q8IV16 184 aa11.95□□□□□ -0.5
CHD1-206ENST00000511067 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
CHD1-206ENST00000511067 RBM26Q5T8P6 1007 aaKnown RBP11.94□□□□□ -0.5
CHD1-206ENST00000511067 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
CHD1-206ENST00000511067 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
CHD1-206ENST00000511067 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
CHD1-206ENST00000511067 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
CHD1-206ENST00000511067 PTGER2P43116 358 aa11.9□□□□□ -0.5
CHD1-206ENST00000511067 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHD1-206ENST00000511067 SLC24A3Q9HC58 644 aa11.9□□□□□ -0.5
CHD1-206ENST00000511067 TBC1D12O60347 775 aa11.89□□□□□ -0.51
CHD1-206ENST00000511067 TMEM132AQ24JP5 1023 aa11.88□□□□□ -0.51
CHD1-206ENST00000511067 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
CHD1-206ENST00000511067 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
CHD1-206ENST00000511067 SLC34A2O95436 690 aa11.87□□□□□ -0.51
CHD1-206ENST00000511067 PTCD2Q8WV60 388 aaKnown RBP11.87□□□□□ -0.51
CHD1-206ENST00000511067 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
CHD1-206ENST00000511067 ERBB3P21860 1342 aa11.86□□□□□ -0.51
CHD1-206ENST00000511067 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
CHD1-206ENST00000511067 GRXCR2A6NFK2 248 aa11.83□□□□□ -0.52
CHD1-206ENST00000511067 EVI5O60447 810 aa11.83□□□□□ -0.52
CHD1-206ENST00000511067 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
CHD1-206ENST00000511067 AK7Q96M32 723 aa11.82□□□□□ -0.52
CHD1-206ENST00000511067 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
CHD1-206ENST00000511067 GPR37O15354 613 aa11.81□□□□□ -0.52
CHD1-206ENST00000511067 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
CHD1-206ENST00000511067 OSBPP22059 807 aa11.8□□□□□ -0.52
CHD1-206ENST00000511067 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
CHD1-206ENST00000511067 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
CHD1-206ENST00000511067 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
CHD1-206ENST00000511067 KRI1Q8N9T8 703 aaKnown RBP11.78□□□□□ -0.52
CHD1-206ENST00000511067 DDX12PQ92771 950 aa11.78□□□□□ -0.52
CHD1-206ENST00000511067 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.531e-6■■■□□ 16.4
CHD1-206ENST00000511067 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
CHD1-206ENST00000511067 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
CHD1-206ENST00000511067 FCHSD2O94868 740 aa11.73□□□□□ -0.53
CHD1-206ENST00000511067 MINK1Q8N4C8 1332 aaPredicted RBP11.72□□□□□ -0.53
CHD1-206ENST00000511067 NUDT7P0C024 238 aa11.72□□□□□ -0.53
CHD1-206ENST00000511067 HIC1Q14526 733 aa11.72□□□□□ -0.53
CHD1-206ENST00000511067 EPAS1Q99814 870 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms