RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
UBE2D3-230ENST00000510599 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
UBE2D3-230ENST00000510599 FBXO22Q8NEZ5 403 aa11.3□□□□□ -0.6
UBE2D3-230ENST00000510599 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
UBE2D3-230ENST00000510599 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
UBE2D3-230ENST00000510599 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
UBE2D3-230ENST00000510599 ERBB3P21860 1342 aa11.3□□□□□ -0.6
UBE2D3-230ENST00000510599 MFRPQ9BY79 579 aa11.27□□□□□ -0.61
UBE2D3-230ENST00000510599 PKD2Q13563 968 aa11.26□□□□□ -0.61
UBE2D3-230ENST00000510599 RGL2O15211 777 aa11.24□□□□□ -0.61
UBE2D3-230ENST00000510599 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-230ENST00000510599 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
UBE2D3-230ENST00000510599 ARSIQ5FYB1 569 aa11.15□□□□□ -0.62
UBE2D3-230ENST00000510599 KIF3CO14782 793 aa11.14□□□□□ -0.63
UBE2D3-230ENST00000510599 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
UBE2D3-230ENST00000510599 C2orf72A6NCS6 295 aa11.13□□□□□ -0.63
UBE2D3-230ENST00000510599 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
UBE2D3-230ENST00000510599 ZNF316A6NFI3 1004 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-230ENST00000510599 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.644e-9■■□□□ 12.2
UBE2D3-230ENST00000510599 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
UBE2D3-230ENST00000510599 PPP1R37O75864 691 aa11.04□□□□□ -0.64
UBE2D3-230ENST00000510599 SLC34A2O95436 690 aa11.04□□□□□ -0.64
UBE2D3-230ENST00000510599 RNF166Q96A37 237 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-230ENST00000510599 NUDT7P0C024 238 aa11.03□□□□□ -0.64
UBE2D3-230ENST00000510599 PTGER2P43116 358 aa11.03□□□□□ -0.64
UBE2D3-230ENST00000510599 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
UBE2D3-230ENST00000510599 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
UBE2D3-230ENST00000510599 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-230ENST00000510599 PBX2P40425 430 aa10.97□□□□□ -0.65
UBE2D3-230ENST00000510599 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
UBE2D3-230ENST00000510599 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.65
UBE2D3-230ENST00000510599 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
UBE2D3-230ENST00000510599 FOXK1P85037 733 aa10.93□□□□□ -0.66
UBE2D3-230ENST00000510599 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-230ENST00000510599 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-230ENST00000510599 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-230ENST00000510599 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-230ENST00000510599 DNAJC5Q9H3Z4 198 aa10.91□□□□□ -0.66
UBE2D3-230ENST00000510599 PLPP6Q8IY26 295 aa10.9□□□□□ -0.66
UBE2D3-230ENST00000510599 TBC1D12O60347 775 aa10.86□□□□□ -0.67
UBE2D3-230ENST00000510599 DSG2Q14126 1118 aa10.86□□□□□ -0.67
UBE2D3-230ENST00000510599 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
UBE2D3-230ENST00000510599 NKX1-1Q15270 411 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-230ENST00000510599 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
UBE2D3-230ENST00000510599 ARHGAP33O14559 1287 aa10.84□□□□□ -0.67
UBE2D3-230ENST00000510599 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
UBE2D3-230ENST00000510599 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
UBE2D3-230ENST00000510599 ADGRD1Q6QNK2 874 aa10.79□□□□□ -0.68
UBE2D3-230ENST00000510599 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
UBE2D3-230ENST00000510599 TK2O00142 265 aa10.76□□□□□ -0.69
UBE2D3-230ENST00000510599 PPP1R15BQ5SWA1 713 aa10.76□□□□□ -0.69
UBE2D3-230ENST00000510599 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
UBE2D3-230ENST00000510599 OXER1Q8TDS5 423 aa10.74□□□□□ -0.69
UBE2D3-230ENST00000510599 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
UBE2D3-230ENST00000510599 PDE4AP27815 886 aa10.73□□□□□ -0.69
UBE2D3-230ENST00000510599 PSEN2P49810 448 aa10.73□□□□□ -0.69
UBE2D3-230ENST00000510599 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
UBE2D3-230ENST00000510599 NCKAP5LQ9HCH0 1330 aa10.7□□□□□ -0.7
UBE2D3-230ENST00000510599 DCAF8L2P0C7V8 631 aa10.7□□□□□ -0.7
UBE2D3-230ENST00000510599 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
UBE2D3-230ENST00000510599 HCSTQ9UBK5 93 aa10.7□□□□□ -0.7
UBE2D3-230ENST00000510599 HRO43593 1189 aa10.69□□□□□ -0.7
UBE2D3-230ENST00000510599 GTPBP6O43824 516 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-230ENST00000510599 ZNF454Q8N9F8 522 aa10.68□□□□□ -0.7
UBE2D3-230ENST00000510599 STAC3Q96MF2 364 aa10.68□□□□□ -0.7
UBE2D3-230ENST00000510599 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-230ENST00000510599 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-230ENST00000510599 BCL2L12Q9HB09 334 aa10.64□□□□□ -0.71
UBE2D3-230ENST00000510599 FOSBP53539 338 aa10.62□□□□□ -0.71
UBE2D3-230ENST00000510599 JPH4Q96JJ6 628 aa10.62□□□□□ -0.71
UBE2D3-230ENST00000510599 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
UBE2D3-230ENST00000510599 MFSD10Q14728 455 aa10.61□□□□□ -0.71
UBE2D3-230ENST00000510599 KCTD12Q96CX2 325 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-230ENST00000510599 EVI5O60447 810 aa10.6□□□□□ -0.71
UBE2D3-230ENST00000510599 PTPREP23469 700 aa10.6□□□□□ -0.71
UBE2D3-230ENST00000510599 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-230ENST00000510599 VPS9D1Q9Y2B5 631 aa10.6□□□□□ -0.71
UBE2D3-230ENST00000510599 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
UBE2D3-230ENST00000510599 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
UBE2D3-230ENST00000510599 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
UBE2D3-230ENST00000510599 ZBED2Q9BTP6 218 aa10.53□□□□□ -0.72
UBE2D3-230ENST00000510599 ADAM33Q9BZ11 813 aa10.52□□□□□ -0.73
UBE2D3-230ENST00000510599 EMILIN3Q9NT22 766 aa10.52□□□□□ -0.73
UBE2D3-230ENST00000510599 GOLGA8CPA6NN73 597 aa10.5□□□□□ -0.73
UBE2D3-230ENST00000510599 BHMG1C9JSJ3 638 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-230ENST00000510599 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-230ENST00000510599 NBPF3Q9H094 633 aa10.5□□□□□ -0.73
UBE2D3-230ENST00000510599 PTPN5P54829 565 aa10.49□□□□□ -0.73
UBE2D3-230ENST00000510599 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
UBE2D3-230ENST00000510599 PPP1R3GB7ZBB8 358 aa10.47□□□□□ -0.73
UBE2D3-230ENST00000510599 PCDHGA10Q9Y5H3 936 aa10.47□□□□□ -0.73
UBE2D3-230ENST00000510599 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
UBE2D3-230ENST00000510599 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
UBE2D3-230ENST00000510599 PHF14O94880 888 aa10.45□□□□□ -0.74
UBE2D3-230ENST00000510599 TYW1BQ6NUM6 668 aa10.45□□□□□ -0.74
UBE2D3-230ENST00000510599 WNT2BQ93097 391 aa10.45□□□□□ -0.74
UBE2D3-230ENST00000510599 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
UBE2D3-230ENST00000510599 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
UBE2D3-230ENST00000510599 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
UBE2D3-230ENST00000510599 EPAS1Q99814 870 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms