RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
ARHGEF28-209ENST00000510131 POTEB3A0JP26 581 aa13.04□□□□□ -0.32
ARHGEF28-209ENST00000510131 RIMBP2O15034 1052 aa13.04□□□□□ -0.32
ARHGEF28-209ENST00000510131 POTEBQ6S5H4 581 aa13.04□□□□□ -0.32
ARHGEF28-209ENST00000510131 HS6ST3Q8IZP7 471 aa13□□□□□ -0.33
ARHGEF28-209ENST00000510131 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
ARHGEF28-209ENST00000510131 PPP1R37O75864 691 aa12.97□□□□□ -0.33
ARHGEF28-209ENST00000510131 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
ARHGEF28-209ENST00000510131 ERBB3P21860 1342 aa12.96□□□□□ -0.33
ARHGEF28-209ENST00000510131 C2orf72A6NCS6 295 aa12.95□□□□□ -0.34
ARHGEF28-209ENST00000510131 KIF3CO14782 793 aa12.95□□□□□ -0.34
ARHGEF28-209ENST00000510131 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
ARHGEF28-209ENST00000510131 SPNS2Q8IVW8 549 aa12.93□□□□□ -0.34
ARHGEF28-209ENST00000510131 KRTAP3-3Q9BYR6 98 aa12.91□□□□□ -0.34
ARHGEF28-209ENST00000510131 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
ARHGEF28-209ENST00000510131 ARSIQ5FYB1 569 aa12.9□□□□□ -0.34
ARHGEF28-209ENST00000510131 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
ARHGEF28-209ENST00000510131 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
ARHGEF28-209ENST00000510131 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
ARHGEF28-209ENST00000510131 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
ARHGEF28-209ENST00000510131 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
ARHGEF28-209ENST00000510131 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF28-209ENST00000510131 SLC34A2O95436 690 aa12.79□□□□□ -0.36
ARHGEF28-209ENST00000510131 ZNF687Q8N1G0 1237 aa12.79□□□□□ -0.36
ARHGEF28-209ENST00000510131 ZNF316A6NFI3 1004 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF28-209ENST00000510131 NUDT7P0C024 238 aa12.76□□□□□ -0.37
ARHGEF28-209ENST00000510131 RYDENQ9NUL5 291 aaKnown RBP12.76□□□□□ -0.37
ARHGEF28-209ENST00000510131 PCDHGA4Q9Y5G9 962 aa12.76□□□□□ -0.37
ARHGEF28-209ENST00000510131 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF28-209ENST00000510131 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
ARHGEF28-209ENST00000510131 FOXK1P85037 733 aa12.72□□□□□ -0.37
ARHGEF28-209ENST00000510131 PLPP6Q8IY26 295 aa12.71□□□□□ -0.37
ARHGEF28-209ENST00000510131 DSG2Q14126 1118 aa12.69□□□□□ -0.38
ARHGEF28-209ENST00000510131 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
ARHGEF28-209ENST00000510131 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF28-209ENST00000510131 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
ARHGEF28-209ENST00000510131 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
ARHGEF28-209ENST00000510131 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
ARHGEF28-209ENST00000510131 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
ARHGEF28-209ENST00000510131 TBC1D12O60347 775 aa12.59□□□□□ -0.39
ARHGEF28-209ENST00000510131 PDE4AP27815 886 aa12.57□□□□□ -0.4
ARHGEF28-209ENST00000510131 PBX2P40425 430 aa12.57□□□□□ -0.4
ARHGEF28-209ENST00000510131 LSM11P83369 360 aaKnown RBP eCLIP12.57□□□□□ -0.4
ARHGEF28-209ENST00000510131 PSDA5PKW4 1024 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF28-209ENST00000510131 PPP1R15BQ5SWA1 713 aa12.56□□□□□ -0.4
ARHGEF28-209ENST00000510131 POTEEQ6S8J3 1075 aa12.56□□□□□ -0.4
ARHGEF28-209ENST00000510131 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
ARHGEF28-209ENST00000510131 NCKAP5LQ9HCH0 1330 aa12.56□□□□□ -0.4
ARHGEF28-209ENST00000510131 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF28-209ENST00000510131 AXIN2Q9Y2T1 843 aa12.55□□□□□ -0.4
ARHGEF28-209ENST00000510131 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
ARHGEF28-209ENST00000510131 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
ARHGEF28-209ENST00000510131 PTGER2P43116 358 aa12.52□□□□□ -0.41
ARHGEF28-209ENST00000510131 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
ARHGEF28-209ENST00000510131 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
ARHGEF28-209ENST00000510131 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
ARHGEF28-209ENST00000510131 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
ARHGEF28-209ENST00000510131 MFSD10Q14728 455 aa12.43□□□□□ -0.42
ARHGEF28-209ENST00000510131 PSEN2P49810 448 aa12.42□□□□□ -0.42
ARHGEF28-209ENST00000510131 CADPS2Q86UW7 1296 aa12.42□□□□□ -0.42
ARHGEF28-209ENST00000510131 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF28-209ENST00000510131 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF28-209ENST00000510131 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
ARHGEF28-209ENST00000510131 ADGRD1Q6QNK2 874 aa12.4□□□□□ -0.42
ARHGEF28-209ENST00000510131 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
ARHGEF28-209ENST00000510131 EVI5O60447 810 aa12.37□□□□□ -0.43
ARHGEF28-209ENST00000510131 TK2O00142 265 aa12.36□□□□□ -0.43
ARHGEF28-209ENST00000510131 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
ARHGEF28-209ENST00000510131 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
ARHGEF28-209ENST00000510131 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF28-209ENST00000510131 FOSBP53539 338 aa12.34□□□□□ -0.43
ARHGEF28-209ENST00000510131 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
ARHGEF28-209ENST00000510131 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
ARHGEF28-209ENST00000510131 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
ARHGEF28-209ENST00000510131 HRO43593 1189 aa12.31□□□□□ -0.44
ARHGEF28-209ENST00000510131 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
ARHGEF28-209ENST00000510131 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
ARHGEF28-209ENST00000510131 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
ARHGEF28-209ENST00000510131 PTPREP23469 700 aa12.27□□□□□ -0.45
ARHGEF28-209ENST00000510131 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF28-209ENST00000510131 ZDHHC16Q969W1 377 aa12.26□□□□□ -0.45
ARHGEF28-209ENST00000510131 STAC3Q96MF2 364 aa12.26□□□□□ -0.45
ARHGEF28-209ENST00000510131 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
ARHGEF28-209ENST00000510131 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
ARHGEF28-209ENST00000510131 ADAM33Q9BZ11 813 aa12.24□□□□□ -0.45
ARHGEF28-209ENST00000510131 SLC4A5Q9BY07 1137 aa12.22□□□□□ -0.45
ARHGEF28-209ENST00000510131 HCSTQ9UBK5 93 aa12.22□□□□□ -0.45
ARHGEF28-209ENST00000510131 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
ARHGEF28-209ENST00000510131 DPYSL4O14531 572 aa12.19□□□□□ -0.46
ARHGEF28-209ENST00000510131 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
ARHGEF28-209ENST00000510131 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
ARHGEF28-209ENST00000510131 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF28-209ENST00000510131 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
ARHGEF28-209ENST00000510131 PHF14O94880 888 aa12.16□□□□□ -0.46
ARHGEF28-209ENST00000510131 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
ARHGEF28-209ENST00000510131 BHMG1C9JSJ3 638 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF28-209ENST00000510131 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
ARHGEF28-209ENST00000510131 PPP1R3GB7ZBB8 358 aa12.11□□□□□ -0.47
ARHGEF28-209ENST00000510131 EPAS1Q99814 870 aa12.11□□□□□ -0.47
ARHGEF28-209ENST00000510131 COL9A1P20849 921 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms