RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ABCA10Q8WWZ4 1543 aa8.89□□□□□ -0.99
NEK1-204ENST00000509912 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
NEK1-204ENST00000509912 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
NEK1-204ENST00000509912 EIF4G3O43432 1585 aaKnown RBP8.89□□□□□ -0.99
NEK1-204ENST00000509912 ARXQ96QS3 562 aa8.88□□□□□ -0.99
NEK1-204ENST00000509912 CABP2Q9NPB3 220 aa8.88□□□□□ -0.99
NEK1-204ENST00000509912 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
NEK1-204ENST00000509912 SHROOM2Q13796 1616 aa8.87□□□□□ -0.99
NEK1-204ENST00000509912 SGIP1Q9BQI5 828 aa8.87□□□□□ -0.99
NEK1-204ENST00000509912 PSEN1P49768 467 aa8.86□□□□□ -0.99
NEK1-204ENST00000509912 RYDENQ9NUL5 291 aaKnown RBP8.86□□□□□ -0.99
NEK1-204ENST00000509912 ERICH3Q5RHP9 1530 aa8.86□□□□□ -0.99
NEK1-204ENST00000509912 TOP2BQ02880 1626 aa8.86□□□□□ -0.99
NEK1-204ENST00000509912 PDAP1Q13442 181 aaKnown RBP8.85□□□□□ -0.99
NEK1-204ENST00000509912 E2F4Q16254 413 aa8.85□□□□□ -0.99
NEK1-204ENST00000509912 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
NEK1-204ENST00000509912 NCKAP5LQ9HCH0 1330 aa8.84□□□□□ -0.99
NEK1-204ENST00000509912 SYNJ1O43426 1573 aa8.84□□□□□ -0.99
NEK1-204ENST00000509912 POLA1P09884 1462 aaPredicted RBP8.82□□□□□ -1
NEK1-204ENST00000509912 LARP6Q9BRS8 491 aaKnown RBP8.82□□□□□ -1
NEK1-204ENST00000509912 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
NEK1-204ENST00000509912 PBRM1Q86U86 1689 aa8.82□□□□□ -1
NEK1-204ENST00000509912 GRIN2BQ13224 1484 aa8.82□□□□□ -1
NEK1-204ENST00000509912 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
NEK1-204ENST00000509912 RBM26Q5T8P6 1007 aaKnown RBP8.81□□□□□ -1
NEK1-204ENST00000509912 CCDC61Q9Y6R9 512 aa8.81□□□□□ -1
NEK1-204ENST00000509912 HOMEZQ8IX15 550 aa8.81□□□□□ -1
NEK1-204ENST00000509912 IL27Q8NEV9 243 aa8.81□□□□□ -1
NEK1-204ENST00000509912 MAP3K13O43283 966 aa8.8□□□□□ -1
NEK1-204ENST00000509912 SYNJ2O15056 1496 aa8.8□□□□□ -1
NEK1-204ENST00000509912 MLLT3P42568 568 aaPredicted RBP8.79□□□□□ -1
NEK1-204ENST00000509912 FBXO22Q8NEZ5 403 aa8.79□□□□□ -1
NEK1-204ENST00000509912 RIMBP3CA6NJZ7 1639 aa8.79□□□□□ -1
NEK1-204ENST00000509912 RIMBP3BA6NNM3 1639 aa8.79□□□□□ -1
NEK1-204ENST00000509912 RIMBP3Q9UFD9 1639 aa8.79□□□□□ -1
NEK1-204ENST00000509912 TESPA1A2RU30 521 aaPredicted RBP8.79□□□□□ -1
NEK1-204ENST00000509912 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
NEK1-204ENST00000509912 CUX1P39880 1505 aa8.79□□□□□ -1
NEK1-204ENST00000509912 RBM42Q9BTD8 480 aaKnown RBP8.79□□□□□ -1
NEK1-204ENST00000509912 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
NEK1-204ENST00000509912 CHD1O14646 1710 aa8.78□□□□□ -1
NEK1-204ENST00000509912 ARID3AQ99856 593 aa8.78□□□□□ -1
NEK1-204ENST00000509912 ARHGEF1Q92888 912 aaKnown RBP8.77□□□□□ -1.01
NEK1-204ENST00000509912 NUP160Q12769 1436 aa8.77□□□□□ -1.01
NEK1-204ENST00000509912 CUL7Q14999 1698 aa8.76□□□□□ -1.01
NEK1-204ENST00000509912 ADAMTS12P58397 1594 aa8.75□□□□□ -1.01
NEK1-204ENST00000509912 MS4A4AQ96JQ5 239 aa8.75□□□□□ -1.01
NEK1-204ENST00000509912 ZMYND10O75800 440 aa8.73□□□□□ -1.01
NEK1-204ENST00000509912 ARHGEF11O15085 1522 aa8.73□□□□□ -1.01
NEK1-204ENST00000509912 SOGA1O94964 1423 aa8.73□□□□□ -1.01
NEK1-204ENST00000509912 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
NEK1-204ENST00000509912 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
NEK1-204ENST00000509912 TRPC6Q9Y210 931 aa8.72□□□□□ -1.01
NEK1-204ENST00000509912 FHAD1B1AJZ9 1412 aa8.7□□□□□ -1.02
NEK1-204ENST00000509912 WRNQ14191 1432 aaPredicted RBP eCLIP8.69□□□□□ -1.02
NEK1-204ENST00000509912 ZNF608Q9ULD9 1512 aaPredicted RBP8.69□□□□□ -1.02
NEK1-204ENST00000509912 ARID3CA6NKF2 412 aa8.68□□□□□ -1.02
NEK1-204ENST00000509912 PODXL2Q9NZ53 605 aa8.68□□□□□ -1.02
NEK1-204ENST00000509912 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
NEK1-204ENST00000509912 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
NEK1-204ENST00000509912 NLRP6P59044 892 aa8.67□□□□□ -1.02
NEK1-204ENST00000509912 DDX27Q96GQ7 796 aaKnown RBP8.67□□□□□ -1.02
NEK1-204ENST00000509912 PHF12Q96QT6 1004 aa8.67□□□□□ -1.02
NEK1-204ENST00000509912 ZNF579Q8NAF0 562 aaKnown RBP8.66□□□□□ -1.02
NEK1-204ENST00000509912 KIF12Q96FN5 646 aa8.65□□□□□ -1.02
NEK1-204ENST00000509912 GRIN2AQ12879 1464 aa8.65□□□□□ -1.02
NEK1-204ENST00000509912 MAPKBP1O60336 1514 aa8.65□□□□□ -1.02
NEK1-204ENST00000509912 UHRF1BP1LA0JNW5 1464 aa8.65□□□□□ -1.03
NEK1-204ENST00000509912 DPYSL4O14531 572 aa8.64□□□□□ -1.03
NEK1-204ENST00000509912 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
NEK1-204ENST00000509912 SNAPC4Q5SXM2 1469 aa8.64□□□□□ -1.03
NEK1-204ENST00000509912 GLI2P10070 1586 aa8.64□□□□□ -1.03
NEK1-204ENST00000509912 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
NEK1-204ENST00000509912 ARAP1Q96P48 1450 aa8.63□□□□□ -1.03
NEK1-204ENST00000509912 CRISPLD2Q9H0B8 497 aa8.63□□□□□ -1.03
NEK1-204ENST00000509912 BARGINQ6ZT62 677 aa8.63□□□□□ -1.03
NEK1-204ENST00000509912 ERICH6Q7L0X2 663 aa8.63□□□□□ -1.03
NEK1-204ENST00000509912 FAM117AQ9C073 453 aa8.63□□□□□ -1.03
NEK1-204ENST00000509912 C1orf115Q9H7X2 142 aa8.62□□□□□ -1.03
NEK1-204ENST00000509912 MKRN3Q13064 507 aaKnown RBP8.61□□□□□ -1.03
NEK1-204ENST00000509912 RUSC2Q8N2Y8 1516 aa8.61□□□□□ -1.03
NEK1-204ENST00000509912 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
NEK1-204ENST00000509912 DPY19L2Q6NUT2 758 aa8.6□□□□□ -1.03
NEK1-204ENST00000509912 PDE4AP27815 886 aa8.59□□□□□ -1.03
NEK1-204ENST00000509912 CEP170Q5SW79 1584 aa8.59□□□□□ -1.03
NEK1-204ENST00000509912 KIAA0586Q9BVV6 1533 aa8.59□□□□□ -1.03
NEK1-204ENST00000509912 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
NEK1-204ENST00000509912 SOX12O15370 315 aa8.58□□□□□ -1.04
NEK1-204ENST00000509912 PDE4DQ08499 809 aa8.58□□□□□ -1.04
NEK1-204ENST00000509912 TMEM106CQ9BVX2 250 aa8.58□□□□□ -1.04
NEK1-204ENST00000509912 TRIM66O15016 1216 aa8.57□□□□□ -1.04
NEK1-204ENST00000509912 AQRO60306 1485 aaKnown RBP eCLIP8.57□□□□□ -1.04
NEK1-204ENST00000509912 UGGT2Q9NYU1 1516 aa8.56□□□□□ -1.04
NEK1-204ENST00000509912 AK7Q96M32 723 aa8.56□□□□□ -1.04
NEK1-204ENST00000509912 ZRANB1Q9UGI0 708 aa8.56□□□□□ -1.04
NEK1-204ENST00000509912 FECHP22830 423 aa8.56□□□□□ -1.04
NEK1-204ENST00000509912 GOLGA2Q08379 1002 aa8.56□□□□□ -1.04
NEK1-204ENST00000509912 RAD54L2Q9Y4B4 1467 aa8.56□□□□□ -1.04
NEK1-204ENST00000509912 GRXCR2A6NFK2 248 aa8.55□□□□□ -1.04
NEK1-204ENST00000509912 MFSD10Q14728 455 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms