RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 HFM1A2PYH4 1435 aa13.29□□□□□ -0.28
SEC24D-209ENST00000509818 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
SEC24D-209ENST00000509818 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.28
SEC24D-209ENST00000509818 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
SEC24D-209ENST00000509818 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
SEC24D-209ENST00000509818 NAIPQ13075 1403 aa13.25□□□□□ -0.29
SEC24D-209ENST00000509818 CFDP1Q9UEE9 299 aaPredicted RBP13.25□□□□□ -0.29
SEC24D-209ENST00000509818 AKNAQ7Z591 1439 aa13.25□□□□□ -0.29
SEC24D-209ENST00000509818 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
SEC24D-209ENST00000509818 KIF14Q15058 1648 aa13.23□□□□□ -0.29
SEC24D-209ENST00000509818 ACIN1Q9UKV3 1341 aaKnown RBP13.22□□□□□ -0.29
SEC24D-209ENST00000509818 PPRC1Q5VV67 1664 aaKnown RBP13.22□□□□□ -0.29
SEC24D-209ENST00000509818 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
SEC24D-209ENST00000509818 DAPK1P53355 1430 aa13.21□□□□□ -0.29
SEC24D-209ENST00000509818 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
SEC24D-209ENST00000509818 GLI2P10070 1586 aa13.21□□□□□ -0.29
SEC24D-209ENST00000509818 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
SEC24D-209ENST00000509818 ROCK1Q13464 1354 aa13.21□□□□□ -0.29
SEC24D-209ENST00000509818 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.3
SEC24D-209ENST00000509818 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
SEC24D-209ENST00000509818 GCC2Q8IWJ2 1684 aa13.2□□□□□ -0.3
SEC24D-209ENST00000509818 ABCC5O15440 1437 aa13.2□□□□□ -0.3
SEC24D-209ENST00000509818 CAMSAP2Q08AD1 1489 aa13.19□□□□□ -0.3
SEC24D-209ENST00000509818 WDR7Q9Y4E6 1490 aa13.18□□□□□ -0.3
SEC24D-209ENST00000509818 KDM6BO15054 1643 aa13.17□□□□□ -0.3
SEC24D-209ENST00000509818 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
SEC24D-209ENST00000509818 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
SEC24D-209ENST00000509818 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
SEC24D-209ENST00000509818 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
SEC24D-209ENST00000509818 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
SEC24D-209ENST00000509818 KCNH8Q96L42 1107 aa13.14□□□□□ -0.31
SEC24D-209ENST00000509818 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
SEC24D-209ENST00000509818 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
SEC24D-209ENST00000509818 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
SEC24D-209ENST00000509818 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
SEC24D-209ENST00000509818 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
SEC24D-209ENST00000509818 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
SEC24D-209ENST00000509818 CROCC2H7BZ55 1655 aa13.11□□□□□ -0.31
SEC24D-209ENST00000509818 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
SEC24D-209ENST00000509818 ANKRD30AQ9BXX3 1397 aa13.1□□□□□ -0.31
SEC24D-209ENST00000509818 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
SEC24D-209ENST00000509818 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
SEC24D-209ENST00000509818 SHANK2Q9UPX8 1470 aa13.09□□□□□ -0.31
SEC24D-209ENST00000509818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEC24D-209ENST00000509818 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
SEC24D-209ENST00000509818 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
SEC24D-209ENST00000509818 CDC42BPBQ9Y5S2 1711 aa13.08□□□□□ -0.32
SEC24D-209ENST00000509818 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
SEC24D-209ENST00000509818 ARHGEF5Q12774 1597 aa13.08□□□□□ -0.32
SEC24D-209ENST00000509818 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
SEC24D-209ENST00000509818 TEX14Q8IWB6 1497 aa13.06□□□□□ -0.32
SEC24D-209ENST00000509818 TTC37Q6PGP7 1564 aa13.06□□□□□ -0.32
SEC24D-209ENST00000509818 HNRNPMP52272 730 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEC24D-209ENST00000509818 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
SEC24D-209ENST00000509818 SAMD9LQ8IVG5 1584 aa13.05□□□□□ -0.32
SEC24D-209ENST00000509818 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
SEC24D-209ENST00000509818 PLEKHH2Q8IVE3 1493 aa13.05□□□□□ -0.32
SEC24D-209ENST00000509818 MBD5Q9P267 1494 aa13.05□□□□□ -0.32
SEC24D-209ENST00000509818 ARHGAP5Q13017 1502 aa13.05□□□□□ -0.32
SEC24D-209ENST00000509818 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
SEC24D-209ENST00000509818 AEBP2Q6ZN18 517 aaPredicted RBP13.04□□□□□ -0.32
SEC24D-209ENST00000509818 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
SEC24D-209ENST00000509818 PLCH2O75038 1416 aa13.03□□□□□ -0.32
SEC24D-209ENST00000509818 CCDC141Q6ZP82 1450 aa13.03□□□□□ -0.32
SEC24D-209ENST00000509818 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
SEC24D-209ENST00000509818 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
SEC24D-209ENST00000509818 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.32
SEC24D-209ENST00000509818 DENND4BO75064 1496 aaPredicted RBP13.02□□□□□ -0.33
SEC24D-209ENST00000509818 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.33
SEC24D-209ENST00000509818 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
SEC24D-209ENST00000509818 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
SEC24D-209ENST00000509818 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
SEC24D-209ENST00000509818 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
SEC24D-209ENST00000509818 KIF15Q9NS87 1388 aa12.98□□□□□ -0.33
SEC24D-209ENST00000509818 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
SEC24D-209ENST00000509818 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
SEC24D-209ENST00000509818 ANKRD30BQ9BXX2 1392 aa12.97□□□□□ -0.33
SEC24D-209ENST00000509818 PZPP20742 1482 aa12.97□□□□□ -0.33
SEC24D-209ENST00000509818 FOXD1Q16676 465 aa12.95□□□□□ -0.34
SEC24D-209ENST00000509818 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
SEC24D-209ENST00000509818 NUP155O75694 1391 aa12.93□□□□□ -0.34
SEC24D-209ENST00000509818 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
SEC24D-209ENST00000509818 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
SEC24D-209ENST00000509818 ADGRL1O94910 1474 aa12.93□□□□□ -0.34
SEC24D-209ENST00000509818 ABCC1P33527 1531 aa12.92□□□□□ -0.34
SEC24D-209ENST00000509818 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
SEC24D-209ENST00000509818 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
SEC24D-209ENST00000509818 RPRD2Q5VT52 1461 aaKnown RBP12.91□□□□□ -0.34
SEC24D-209ENST00000509818 NEO1Q92859 1461 aa12.91□□□□□ -0.34
SEC24D-209ENST00000509818 PKD2Q13563 968 aa12.91□□□□□ -0.34
SEC24D-209ENST00000509818 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
SEC24D-209ENST00000509818 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
SEC24D-209ENST00000509818 L3MBTL2Q969R5 705 aa12.89□□□□□ -0.35
SEC24D-209ENST00000509818 FANCAO15360 1455 aa12.88□□□□□ -0.35
SEC24D-209ENST00000509818 RTEL1-TNFRSF6BF6WH68 1400 aa12.88□□□□□ -0.35
SEC24D-209ENST00000509818 MIER1Q8N108 512 aa12.87□□□□□ -0.35
SEC24D-209ENST00000509818 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
SEC24D-209ENST00000509818 ERBINQ96RT1 1412 aa12.86□□□□□ -0.35
SEC24D-209ENST00000509818 UNC13BO14795 1591 aa12.85□□□□□ -0.35
SEC24D-209ENST00000509818 RICTORQ6R327 1708 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms