RNA–Protein interactions for RNA: ENST00000509673.2

PGBD4P4-201, Transcript of piggyBac transposable element derived 4 pseudogene 4, humanhuman

BASIC

Gene PGBD4P4, Length 613 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P4-201ENST00000509673 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
PGBD4P4-201ENST00000509673 ERBB3P21860 1342 aa11.8□□□□□ -0.52
PGBD4P4-201ENST00000509673 STK24Q9Y6E0 443 aa11.78□□□□□ -0.52
PGBD4P4-201ENST00000509673 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
PGBD4P4-201ENST00000509673 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
PGBD4P4-201ENST00000509673 STK25O00506 426 aa11.75□□□□□ -0.53
PGBD4P4-201ENST00000509673 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
PGBD4P4-201ENST00000509673 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
PGBD4P4-201ENST00000509673 GPR153Q6NV75 609 aa11.69□□□□□ -0.54
PGBD4P4-201ENST00000509673 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
PGBD4P4-201ENST00000509673 PKD2Q13563 968 aa11.64□□□□□ -0.55
PGBD4P4-201ENST00000509673 ZNF687Q8N1G0 1237 aa11.64□□□□□ -0.55
PGBD4P4-201ENST00000509673 ARSIQ5FYB1 569 aa11.62□□□□□ -0.55
PGBD4P4-201ENST00000509673 RGL2O15211 777 aa11.61□□□□□ -0.55
PGBD4P4-201ENST00000509673 KIF3CO14782 793 aa11.59□□□□□ -0.55
PGBD4P4-201ENST00000509673 PTGER2P43116 358 aa11.58□□□□□ -0.56
PGBD4P4-201ENST00000509673 C2orf72A6NCS6 295 aa11.57□□□□□ -0.56
PGBD4P4-201ENST00000509673 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
PGBD4P4-201ENST00000509673 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
PGBD4P4-201ENST00000509673 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
PGBD4P4-201ENST00000509673 SLC34A2O95436 690 aa11.54□□□□□ -0.56
PGBD4P4-201ENST00000509673 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
PGBD4P4-201ENST00000509673 KHSRPQ92945 711 aaKnown RBP eCLIP11.5□□□□□ -0.57
PGBD4P4-201ENST00000509673 PBX2P40425 430 aa11.48□□□□□ -0.57
PGBD4P4-201ENST00000509673 NUDT7P0C024 238 aa11.47□□□□□ -0.57
PGBD4P4-201ENST00000509673 PCDHGA4Q9Y5G9 962 aa11.47□□□□□ -0.57
PGBD4P4-201ENST00000509673 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
PGBD4P4-201ENST00000509673 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
PGBD4P4-201ENST00000509673 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.58
PGBD4P4-201ENST00000509673 PSDA5PKW4 1024 aaPredicted RBP11.44□□□□□ -0.58
PGBD4P4-201ENST00000509673 PPP1R37O75864 691 aa11.43□□□□□ -0.58
PGBD4P4-201ENST00000509673 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
PGBD4P4-201ENST00000509673 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
PGBD4P4-201ENST00000509673 FOXK1P85037 733 aa11.37□□□□□ -0.59
PGBD4P4-201ENST00000509673 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
PGBD4P4-201ENST00000509673 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
PGBD4P4-201ENST00000509673 TBC1D12O60347 775 aa11.35□□□□□ -0.59
PGBD4P4-201ENST00000509673 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
PGBD4P4-201ENST00000509673 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
PGBD4P4-201ENST00000509673 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
PGBD4P4-201ENST00000509673 ARHGAP33O14559 1287 aa11.32□□□□□ -0.6
PGBD4P4-201ENST00000509673 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
PGBD4P4-201ENST00000509673 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
PGBD4P4-201ENST00000509673 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
PGBD4P4-201ENST00000509673 DSG2Q14126 1118 aa11.28□□□□□ -0.6
PGBD4P4-201ENST00000509673 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
PGBD4P4-201ENST00000509673 TK2O00142 265 aa11.26□□□□□ -0.61
PGBD4P4-201ENST00000509673 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
PGBD4P4-201ENST00000509673 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
PGBD4P4-201ENST00000509673 HCSTQ9UBK5 93 aa11.23□□□□□ -0.61
PGBD4P4-201ENST00000509673 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
PGBD4P4-201ENST00000509673 OXER1Q8TDS5 423 aa11.19□□□□□ -0.62
PGBD4P4-201ENST00000509673 CRISPLD2Q9H0B8 497 aa11.19□□□□□ -0.62
PGBD4P4-201ENST00000509673 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
PGBD4P4-201ENST00000509673 PDE4AP27815 886 aa11.16□□□□□ -0.62
PGBD4P4-201ENST00000509673 PSEN2P49810 448 aa11.16□□□□□ -0.62
PGBD4P4-201ENST00000509673 PPP1R15BQ5SWA1 713 aa11.16□□□□□ -0.62
PGBD4P4-201ENST00000509673 HRO43593 1189 aa11.15□□□□□ -0.62
PGBD4P4-201ENST00000509673 DMRTA1Q5VZB9 504 aa11.15□□□□□ -0.62
PGBD4P4-201ENST00000509673 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
PGBD4P4-201ENST00000509673 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
PGBD4P4-201ENST00000509673 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
PGBD4P4-201ENST00000509673 ZNF454Q8N9F8 522 aa11.11□□□□□ -0.63
PGBD4P4-201ENST00000509673 BCL2L12Q9HB09 334 aa11.1□□□□□ -0.63
PGBD4P4-201ENST00000509673 SLC4A5Q9BY07 1137 aa11.08□□□□□ -0.64
PGBD4P4-201ENST00000509673 NCKAP5LQ9HCH0 1330 aa11.08□□□□□ -0.64
PGBD4P4-201ENST00000509673 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
PGBD4P4-201ENST00000509673 FOSBP53539 338 aa11.07□□□□□ -0.64
PGBD4P4-201ENST00000509673 VPS9D1Q9Y2B5 631 aa11.07□□□□□ -0.64
PGBD4P4-201ENST00000509673 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
PGBD4P4-201ENST00000509673 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
PGBD4P4-201ENST00000509673 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
PGBD4P4-201ENST00000509673 PTPREP23469 700 aa11.05□□□□□ -0.64
PGBD4P4-201ENST00000509673 JPH4Q96JJ6 628 aa11.05□□□□□ -0.64
PGBD4P4-201ENST00000509673 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
PGBD4P4-201ENST00000509673 EVI5O60447 810 aa11.03□□□□□ -0.64
PGBD4P4-201ENST00000509673 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
PGBD4P4-201ENST00000509673 MAP3K9P80192 1104 aa11.01□□□□□ -0.65
PGBD4P4-201ENST00000509673 MFSD10Q14728 455 aa11.01□□□□□ -0.65
PGBD4P4-201ENST00000509673 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
PGBD4P4-201ENST00000509673 GOLGA8CPA6NN73 597 aa10.97□□□□□ -0.65
PGBD4P4-201ENST00000509673 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
PGBD4P4-201ENST00000509673 NBPF3Q9H094 633 aa10.96□□□□□ -0.65
PGBD4P4-201ENST00000509673 BHMG1C9JSJ3 638 aaPredicted RBP10.95□□□□□ -0.66
PGBD4P4-201ENST00000509673 MRPL50Q8N5N7 158 aaKnown RBP10.95□□□□□ -0.66
PGBD4P4-201ENST00000509673 ADAM33Q9BZ11 813 aa10.94□□□□□ -0.66
PGBD4P4-201ENST00000509673 PTPN5P54829 565 aa10.93□□□□□ -0.66
PGBD4P4-201ENST00000509673 THSD4Q6ZMP0 1018 aa10.92□□□□□ -0.66
PGBD4P4-201ENST00000509673 FBXW7Q969H0 707 aa10.92□□□□□ -0.66
PGBD4P4-201ENST00000509673 WNT2BQ93097 391 aa10.91□□□□□ -0.66
PGBD4P4-201ENST00000509673 PPP1R3GB7ZBB8 358 aa10.9□□□□□ -0.66
PGBD4P4-201ENST00000509673 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
PGBD4P4-201ENST00000509673 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
PGBD4P4-201ENST00000509673 TYW1BQ6NUM6 668 aa10.88□□□□□ -0.67
PGBD4P4-201ENST00000509673 PCDHGA10Q9Y5H3 936 aa10.88□□□□□ -0.67
PGBD4P4-201ENST00000509673 PHF14O94880 888 aa10.87□□□□□ -0.67
PGBD4P4-201ENST00000509673 RGS20O76081 388 aa10.86□□□□□ -0.67
PGBD4P4-201ENST00000509673 RABGEF1Q9UJ41 708 aa10.86□□□□□ -0.67
PGBD4P4-201ENST00000509673 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
PGBD4P4-201ENST00000509673 CADPS2Q86UW7 1296 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms