RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 HS3ST6Q96QI5 342 aa14.31□□□□□ -0.12
LINC01088-205ENST00000509088 FAM205CA6NFA0 338 aa14.3□□□□□ -0.12
LINC01088-205ENST00000509088 KRTAP3-3Q9BYR6 98 aa14.27□□□□□ -0.13
LINC01088-205ENST00000509088 KRTAP3-2Q9BYR7 98 aa14.27□□□□□ -0.13
LINC01088-205ENST00000509088 ZNF710Q8N1W2 664 aa14.26□□□□□ -0.13
LINC01088-205ENST00000509088 KIF3CO14782 793 aa14.25□□□□□ -0.13
LINC01088-205ENST00000509088 PPP1R37O75864 691 aa14.23□□□□□ -0.13
LINC01088-205ENST00000509088 GPR153Q6NV75 609 aa14.22□□□□□ -0.13
LINC01088-205ENST00000509088 SPNS2Q8IVW8 549 aa14.21□□□□□ -0.13
LINC01088-205ENST00000509088 HS6ST3Q8IZP7 471 aa14.21□□□□□ -0.13
LINC01088-205ENST00000509088 ZSWIM6Q9HCJ5 1215 aa14.19□□□□□ -0.14
LINC01088-205ENST00000509088 C2orf72A6NCS6 295 aa14.18□□□□□ -0.14
LINC01088-205ENST00000509088 RIMBP2O15034 1052 aa14.18□□□□□ -0.14
LINC01088-205ENST00000509088 MMRN1Q13201 1228 aa14.14□□□□□ -0.15
LINC01088-205ENST00000509088 ERBB3P21860 1342 aa14.13□□□□□ -0.15
LINC01088-205ENST00000509088 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
LINC01088-205ENST00000509088 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
LINC01088-205ENST00000509088 KHSRPQ92945 711 aaKnown RBP eCLIP14.11□□□□□ -0.157e-7■■□□□ 12.3
LINC01088-205ENST00000509088 VARS2Q5ST30 1063 aaKnown RBP14.1□□□□□ -0.15
LINC01088-205ENST00000509088 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
LINC01088-205ENST00000509088 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
LINC01088-205ENST00000509088 TMC2Q8TDI7 906 aa14.02□□□□□ -0.17
LINC01088-205ENST00000509088 SLC34A2O95436 690 aa14.01□□□□□ -0.17
LINC01088-205ENST00000509088 ZNF687Q8N1G0 1237 aa14.01□□□□□ -0.17
LINC01088-205ENST00000509088 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
LINC01088-205ENST00000509088 PCDHGA4Q9Y5G9 962 aa13.97□□□□□ -0.17
LINC01088-205ENST00000509088 NUDT7P0C024 238 aa13.96□□□□□ -0.17
LINC01088-205ENST00000509088 FOXK1P85037 733 aa13.92□□□□□ -0.18
LINC01088-205ENST00000509088 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
LINC01088-205ENST00000509088 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
LINC01088-205ENST00000509088 DSG2Q14126 1118 aa13.9□□□□□ -0.18
LINC01088-205ENST00000509088 LHX6Q9UPM6 363 aa13.89□□□□□ -0.19
LINC01088-205ENST00000509088 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
LINC01088-205ENST00000509088 POTEEQ6S8J3 1075 aa13.87□□□□□ -0.19
LINC01088-205ENST00000509088 PTCD2Q8WV60 388 aaKnown RBP13.86□□□□□ -0.19
LINC01088-205ENST00000509088 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
LINC01088-205ENST00000509088 CRISPLD2Q9H0B8 497 aa13.84□□□□□ -0.19
LINC01088-205ENST00000509088 RYDENQ9NUL5 291 aaKnown RBP13.8□□□□□ -0.2
LINC01088-205ENST00000509088 NCKAP5LQ9HCH0 1330 aa13.8□□□□□ -0.2
LINC01088-205ENST00000509088 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.24e-6■■■■■ 28.9
LINC01088-205ENST00000509088 AXIN2Q9Y2T1 843 aa13.76□□□□□ -0.21
LINC01088-205ENST00000509088 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
LINC01088-205ENST00000509088 RNF166Q96A37 237 aaPredicted RBP13.74□□□□□ -0.21
LINC01088-205ENST00000509088 PBX2P40425 430 aa13.73□□□□□ -0.21
LINC01088-205ENST00000509088 ANKRD13DQ6ZTN6 518 aa13.73□□□□□ -0.21
LINC01088-205ENST00000509088 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
LINC01088-205ENST00000509088 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
LINC01088-205ENST00000509088 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
LINC01088-205ENST00000509088 UPF1Q92900 1129 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC01088-205ENST00000509088 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-205ENST00000509088 PTGER2P43116 358 aa13.66□□□□□ -0.22
LINC01088-205ENST00000509088 PDE4AP27815 886 aa13.65□□□□□ -0.22
LINC01088-205ENST00000509088 ARHGAP33O14559 1287 aa13.64□□□□□ -0.23
LINC01088-205ENST00000509088 TBC1D12O60347 775 aa13.64□□□□□ -0.23
LINC01088-205ENST00000509088 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
LINC01088-205ENST00000509088 MFSD10Q14728 455 aa13.62□□□□□ -0.23
LINC01088-205ENST00000509088 PSEN2P49810 448 aa13.61□□□□□ -0.23
LINC01088-205ENST00000509088 DMRTA1Q5VZB9 504 aa13.61□□□□□ -0.23
LINC01088-205ENST00000509088 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
LINC01088-205ENST00000509088 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.24
LINC01088-205ENST00000509088 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
LINC01088-205ENST00000509088 DDX27Q96GQ7 796 aaKnown RBP13.58□□□□□ -0.24
LINC01088-205ENST00000509088 EMILIN3Q9NT22 766 aa13.55□□□□□ -0.24
LINC01088-205ENST00000509088 HRO43593 1189 aa13.54□□□□□ -0.24
LINC01088-205ENST00000509088 ANO8Q9HCE9 1232 aaPredicted RBP13.54□□□□□ -0.24
LINC01088-205ENST00000509088 TK2O00142 265 aa13.53□□□□□ -0.24
LINC01088-205ENST00000509088 FOSBP53539 338 aa13.52□□□□□ -0.25
LINC01088-205ENST00000509088 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
LINC01088-205ENST00000509088 EVI5O60447 810 aa13.5□□□□□ -0.25
LINC01088-205ENST00000509088 KCNK17Q96T54 332 aa13.5□□□□□ -0.25
LINC01088-205ENST00000509088 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
LINC01088-205ENST00000509088 BCL2L12Q9HB09 334 aa13.48□□□□□ -0.25
LINC01088-205ENST00000509088 JPH4Q96JJ6 628 aa13.46□□□□□ -0.25
LINC01088-205ENST00000509088 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
LINC01088-205ENST00000509088 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
LINC01088-205ENST00000509088 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
LINC01088-205ENST00000509088 ADAM33Q9BZ11 813 aa13.42□□□□□ -0.26
LINC01088-205ENST00000509088 VPS9D1Q9Y2B5 631 aa13.42□□□□□ -0.26
LINC01088-205ENST00000509088 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
LINC01088-205ENST00000509088 ZDHHC16Q969W1 377 aa13.38□□□□□ -0.27
LINC01088-205ENST00000509088 SLC4A5Q9BY07 1137 aa13.38□□□□□ -0.27
LINC01088-205ENST00000509088 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
LINC01088-205ENST00000509088 PCDHGA10Q9Y5H3 936 aa13.37□□□□□ -0.27
LINC01088-205ENST00000509088 PTPREP23469 700 aa13.35□□□□□ -0.27
LINC01088-205ENST00000509088 BHMG1C9JSJ3 638 aaPredicted RBP13.34□□□□□ -0.27
LINC01088-205ENST00000509088 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
LINC01088-205ENST00000509088 HCSTQ9UBK5 93 aa13.33□□□□□ -0.28
LINC01088-205ENST00000509088 DPYSL4O14531 572 aa13.31□□□□□ -0.28
LINC01088-205ENST00000509088 KCTD12Q96CX2 325 aaKnown RBP13.31□□□□□ -0.28
LINC01088-205ENST00000509088 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
LINC01088-205ENST00000509088 PHF14O94880 888 aa13.28□□□□□ -0.28
LINC01088-205ENST00000509088 COL9A1P20849 921 aa13.27□□□□□ -0.29
LINC01088-205ENST00000509088 TYW1BQ6NUM6 668 aa13.25□□□□□ -0.29
LINC01088-205ENST00000509088 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
LINC01088-205ENST00000509088 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
LINC01088-205ENST00000509088 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
LINC01088-205ENST00000509088 PROX2Q3B8N5 592 aa13.22□□□□□ -0.29
LINC01088-205ENST00000509088 PLA2G2EQ9NZK7 142 aa13.22□□□□□ -0.29
LINC01088-205ENST00000509088 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
LINC01088-205ENST00000509088 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms