RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MMRN1Q13201 1228 aa10.26□□□□□ -0.77
SMARCA5-202ENST00000508573 RIMBP2O15034 1052 aa10.25□□□□□ -0.77
SMARCA5-202ENST00000508573 ERBB3P21860 1342 aa10.25□□□□□ -0.77
SMARCA5-202ENST00000508573 PKD2Q13563 968 aa10.24□□□□□ -0.77
SMARCA5-202ENST00000508573 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
SMARCA5-202ENST00000508573 RGL2O15211 777 aa10.22□□□□□ -0.77
SMARCA5-202ENST00000508573 KRTAP3-3Q9BYR6 98 aa10.22□□□□□ -0.77
SMARCA5-202ENST00000508573 KRTAP3-2Q9BYR7 98 aa10.22□□□□□ -0.77
SMARCA5-202ENST00000508573 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
SMARCA5-202ENST00000508573 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
SMARCA5-202ENST00000508573 GPR153Q6NV75 609 aa10.16□□□□□ -0.78
SMARCA5-202ENST00000508573 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
SMARCA5-202ENST00000508573 ARSIQ5FYB1 569 aa10.15□□□□□ -0.78
SMARCA5-202ENST00000508573 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
SMARCA5-202ENST00000508573 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCA5-202ENST00000508573 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
SMARCA5-202ENST00000508573 PPP1R37O75864 691 aa10.07□□□□□ -0.8
SMARCA5-202ENST00000508573 KIF3CO14782 793 aa10.06□□□□□ -0.8
SMARCA5-202ENST00000508573 TMC2Q8TDI7 906 aa10.05□□□□□ -0.8
SMARCA5-202ENST00000508573 ZNF316A6NFI3 1004 aaPredicted RBP10.04□□□□□ -0.8
SMARCA5-202ENST00000508573 NUDT7P0C024 238 aa10□□□□□ -0.81
SMARCA5-202ENST00000508573 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
SMARCA5-202ENST00000508573 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
SMARCA5-202ENST00000508573 PCDHGA4Q9Y5G9 962 aa9.98□□□□□ -0.81
SMARCA5-202ENST00000508573 HS6ST3Q8IZP7 471 aa9.97□□□□□ -0.81
SMARCA5-202ENST00000508573 SLC34A2O95436 690 aa9.96□□□□□ -0.82
SMARCA5-202ENST00000508573 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.82
SMARCA5-202ENST00000508573 MYT1LQ9UL68 1186 aa9.96□□□□□ -0.82
SMARCA5-202ENST00000508573 LHX6Q9UPM6 363 aa9.96□□□□□ -0.82
SMARCA5-202ENST00000508573 PLPP6Q8IY26 295 aa9.9□□□□□ -0.82
SMARCA5-202ENST00000508573 AXIN2Q9Y2T1 843 aa9.9□□□□□ -0.82
SMARCA5-202ENST00000508573 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMARCA5-202ENST00000508573 GPHNQ9NQX3 736 aaPredicted RBP9.89□□□□□ -0.83
SMARCA5-202ENST00000508573 FOXK1P85037 733 aa9.88□□□□□ -0.83
SMARCA5-202ENST00000508573 PTGER2P43116 358 aa9.86□□□□□ -0.83
SMARCA5-202ENST00000508573 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
SMARCA5-202ENST00000508573 POTEEQ6S8J3 1075 aa9.86□□□□□ -0.83
SMARCA5-202ENST00000508573 PTCD2Q8WV60 388 aaKnown RBP9.86□□□□□ -0.83
SMARCA5-202ENST00000508573 PBX2P40425 430 aa9.85□□□□□ -0.83
SMARCA5-202ENST00000508573 DSG2Q14126 1118 aa9.85□□□□□ -0.83
SMARCA5-202ENST00000508573 TBC1D12O60347 775 aa9.84□□□□□ -0.83
SMARCA5-202ENST00000508573 KDM4FA0A1W2PPD8 638 aa9.81□□□□□ -0.84
SMARCA5-202ENST00000508573 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
SMARCA5-202ENST00000508573 ARHGAP33O14559 1287 aa9.81□□□□□ -0.84
SMARCA5-202ENST00000508573 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
SMARCA5-202ENST00000508573 DNAJC5Q9H3Z4 198 aa9.8□□□□□ -0.84
SMARCA5-202ENST00000508573 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
SMARCA5-202ENST00000508573 PSEN2P49810 448 aa9.76□□□□□ -0.85
SMARCA5-202ENST00000508573 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
SMARCA5-202ENST00000508573 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMARCA5-202ENST00000508573 PDE4AP27815 886 aa9.75□□□□□ -0.85
SMARCA5-202ENST00000508573 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
SMARCA5-202ENST00000508573 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
SMARCA5-202ENST00000508573 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
SMARCA5-202ENST00000508573 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
SMARCA5-202ENST00000508573 CRISPLD2Q9H0B8 497 aa9.73□□□□□ -0.85
SMARCA5-202ENST00000508573 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
SMARCA5-202ENST00000508573 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
SMARCA5-202ENST00000508573 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
SMARCA5-202ENST00000508573 TK2O00142 265 aa9.69□□□□□ -0.86
SMARCA5-202ENST00000508573 KCNK17Q96T54 332 aa9.69□□□□□ -0.86
SMARCA5-202ENST00000508573 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
SMARCA5-202ENST00000508573 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
SMARCA5-202ENST00000508573 KCNH8Q96L42 1107 aa9.68□□□□□ -0.86
SMARCA5-202ENST00000508573 HCSTQ9UBK5 93 aa9.68□□□□□ -0.86
SMARCA5-202ENST00000508573 HRO43593 1189 aa9.66□□□□□ -0.86
SMARCA5-202ENST00000508573 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
SMARCA5-202ENST00000508573 EVI5O60447 810 aa9.63□□□□□ -0.87
SMARCA5-202ENST00000508573 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
SMARCA5-202ENST00000508573 KCTD12Q96CX2 325 aaKnown RBP9.63□□□□□ -0.87
SMARCA5-202ENST00000508573 ANO8Q9HCE9 1232 aaPredicted RBP9.62□□□□□ -0.87
SMARCA5-202ENST00000508573 PLA2G2EQ9NZK7 142 aa9.62□□□□□ -0.87
SMARCA5-202ENST00000508573 SLC24A1O60721 1099 aa9.61□□□□□ -0.87
SMARCA5-202ENST00000508573 VPS9D1Q9Y2B5 631 aa9.61□□□□□ -0.87
SMARCA5-202ENST00000508573 FOSBP53539 338 aa9.6□□□□□ -0.87
SMARCA5-202ENST00000508573 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
SMARCA5-202ENST00000508573 PTPREP23469 700 aa9.59□□□□□ -0.87
SMARCA5-202ENST00000508573 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
SMARCA5-202ENST00000508573 ZDHHC16Q969W1 377 aa9.57□□□□□ -0.88
SMARCA5-202ENST00000508573 PTPN5P54829 565 aa9.56□□□□□ -0.88
SMARCA5-202ENST00000508573 MFSD10Q14728 455 aa9.56□□□□□ -0.88
SMARCA5-202ENST00000508573 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
SMARCA5-202ENST00000508573 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
SMARCA5-202ENST00000508573 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
SMARCA5-202ENST00000508573 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
SMARCA5-202ENST00000508573 GOLGA8CPA6NN73 597 aa9.53□□□□□ -0.88
SMARCA5-202ENST00000508573 ZBED2Q9BTP6 218 aa9.52□□□□□ -0.89
SMARCA5-202ENST00000508573 BHMG1C9JSJ3 638 aaPredicted RBP9.51□□□□□ -0.89
SMARCA5-202ENST00000508573 MRPL50Q8N5N7 158 aaKnown RBP9.5□□□□□ -0.89
SMARCA5-202ENST00000508573 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
SMARCA5-202ENST00000508573 WNT2BQ93097 391 aa9.47□□□□□ -0.89
SMARCA5-202ENST00000508573 THSD4Q6ZMP0 1018 aa9.45□□□□□ -0.9
SMARCA5-202ENST00000508573 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
SMARCA5-202ENST00000508573 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
SMARCA5-202ENST00000508573 PHF14O94880 888 aa9.44□□□□□ -0.9
SMARCA5-202ENST00000508573 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
SMARCA5-202ENST00000508573 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
SMARCA5-202ENST00000508573 DPYSL4O14531 572 aa9.43□□□□□ -0.9
SMARCA5-202ENST00000508573 COL9A1P20849 921 aa9.43□□□□□ -0.9
SMARCA5-202ENST00000508573 PROX2Q3B8N5 592 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms