RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 GGT6Q6P531 493 aa20.67■□□□□ 0.9
SH3TC1-210ENST00000506360 ISY1Q9ULR0 285 aaKnown RBP20.67■□□□□ 0.9
SH3TC1-210ENST00000506360 HDGFL2Q7Z4V5 671 aaPredicted RBP20.65■□□□□ 0.9
SH3TC1-210ENST00000506360 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
SH3TC1-210ENST00000506360 APBB1O00213 710 aa20.64■□□□□ 0.89
SH3TC1-210ENST00000506360 NACADO15069 1562 aa20.63■□□□□ 0.89
SH3TC1-210ENST00000506360 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
SH3TC1-210ENST00000506360 CUX2O14529 1486 aa20.62■□□□□ 0.89
SH3TC1-210ENST00000506360 PAK3O75914 559 aaPredicted RBP20.61■□□□□ 0.89
SH3TC1-210ENST00000506360 KTN1Q86UP2 1357 aaKnown RBP20.61■□□□□ 0.89
SH3TC1-210ENST00000506360 GNL2Q13823 731 aaKnown RBP20.6■□□□□ 0.89
SH3TC1-210ENST00000506360 PKD2Q13563 968 aa20.6■□□□□ 0.89
SH3TC1-210ENST00000506360 DRC7Q8IY82 874 aa20.59■□□□□ 0.89
SH3TC1-210ENST00000506360 CFAP44Q96MT7 982 aa20.59■□□□□ 0.89
SH3TC1-210ENST00000506360 CHAF1AQ13111 956 aaPredicted RBP20.59■□□□□ 0.89
SH3TC1-210ENST00000506360 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.88
SH3TC1-210ENST00000506360 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
SH3TC1-210ENST00000506360 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
SH3TC1-210ENST00000506360 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
SH3TC1-210ENST00000506360 FOXD1Q16676 465 aa20.57■□□□□ 0.88
SH3TC1-210ENST00000506360 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
SH3TC1-210ENST00000506360 SETD5Q9C0A6 1442 aa20.57■□□□□ 0.88
SH3TC1-210ENST00000506360 KIAA1211Q6ZU35 1233 aa20.56■□□□□ 0.88
SH3TC1-210ENST00000506360 TIMELESSQ9UNS1 1208 aa20.56■□□□□ 0.88
SH3TC1-210ENST00000506360 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
SH3TC1-210ENST00000506360 MSNP26038 577 aaKnown RBP20.55■□□□□ 0.88
SH3TC1-210ENST00000506360 U2AF1L5P0DN76 240 aaPredicted RBP20.55■□□□□ 0.88
SH3TC1-210ENST00000506360 U2AF1Q01081 240 aaKnown RBP eCLIP20.55■□□□□ 0.883e-7■□□□□ 9.6
SH3TC1-210ENST00000506360 ROCK2O75116 1388 aaKnown RBP20.53■□□□□ 0.88
SH3TC1-210ENST00000506360 ITPRIPQ8IWB1 547 aa20.53■□□□□ 0.88
SH3TC1-210ENST00000506360 L1TD1Q5T7N2 865 aaKnown RBP20.53■□□□□ 0.88
SH3TC1-210ENST00000506360 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
SH3TC1-210ENST00000506360 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
SH3TC1-210ENST00000506360 SOGA1O94964 1423 aa20.49■□□□□ 0.87
SH3TC1-210ENST00000506360 RWDD1Q9H446 243 aaPredicted RBP20.47■□□□□ 0.87
SH3TC1-210ENST00000506360 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
SH3TC1-210ENST00000506360 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
SH3TC1-210ENST00000506360 NUP155O75694 1391 aa20.44■□□□□ 0.86
SH3TC1-210ENST00000506360 RALBP1Q15311 655 aa20.44■□□□□ 0.86
SH3TC1-210ENST00000506360 SPAG9O60271 1321 aaKnown RBP20.43■□□□□ 0.86
SH3TC1-210ENST00000506360 STK31Q9BXU1 1019 aa20.43■□□□□ 0.86
SH3TC1-210ENST00000506360 GBP4Q96PP9 640 aa20.43■□□□□ 0.86
SH3TC1-210ENST00000506360 CHMP3Q9Y3E7 222 aa20.43■□□□□ 0.86
SH3TC1-210ENST00000506360 GORABQ5T7V8 394 aa20.42■□□□□ 0.86
SH3TC1-210ENST00000506360 MPHOSPH9Q99550 1183 aa20.42■□□□□ 0.86
SH3TC1-210ENST00000506360 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
SH3TC1-210ENST00000506360 CCDC9Q9Y3X0 531 aaKnown RBP20.41■□□□□ 0.86
SH3TC1-210ENST00000506360 TMX4Q9H1E5 349 aaPredicted RBP20.41■□□□□ 0.86
SH3TC1-210ENST00000506360 KIAA2012Q0VF49 1180 aa20.4■□□□□ 0.86
SH3TC1-210ENST00000506360 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
SH3TC1-210ENST00000506360 EFCAB2Q5VUJ9 269 aa20.4■□□□□ 0.86
SH3TC1-210ENST00000506360 ANKRD30AQ9BXX3 1397 aa20.38■□□□□ 0.85
SH3TC1-210ENST00000506360 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
SH3TC1-210ENST00000506360 TAF7LQ5H9L4 462 aa20.38■□□□□ 0.85
SH3TC1-210ENST00000506360 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
SH3TC1-210ENST00000506360 PTMSP20962 102 aa20.38■□□□□ 0.85
SH3TC1-210ENST00000506360 SMC4Q9NTJ3 1288 aa20.38■□□□□ 0.85
SH3TC1-210ENST00000506360 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
SH3TC1-210ENST00000506360 DEKP35659 375 aaKnown RBP20.37■□□□□ 0.85
SH3TC1-210ENST00000506360 GPATCH3Q96I76 525 aa20.37■□□□□ 0.85
SH3TC1-210ENST00000506360 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
SH3TC1-210ENST00000506360 PMFBP1Q8TBY8 1022 aa20.37■□□□□ 0.85
SH3TC1-210ENST00000506360 CHMP4AQ9BY43 222 aa20.37■□□□□ 0.85
SH3TC1-210ENST00000506360 GZF1Q9H116 711 aaPredicted RBP20.36■□□□□ 0.85
SH3TC1-210ENST00000506360 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
SH3TC1-210ENST00000506360 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
SH3TC1-210ENST00000506360 MFAP1P55081 439 aaKnown RBP20.36■□□□□ 0.85
SH3TC1-210ENST00000506360 HSP90B1P14625 803 aaKnown RBP20.35■□□□□ 0.85
SH3TC1-210ENST00000506360 KIF3BO15066 747 aa20.35■□□□□ 0.85
SH3TC1-210ENST00000506360 TERF2IPQ9NYB0 399 aa20.35■□□□□ 0.85
SH3TC1-210ENST00000506360 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
SH3TC1-210ENST00000506360 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
SH3TC1-210ENST00000506360 SLC4A10Q6U841 1118 aa20.34■□□□□ 0.85
SH3TC1-210ENST00000506360 CCDC146Q8IYE0 955 aa20.33■□□□□ 0.84
SH3TC1-210ENST00000506360 HMMRO75330 724 aa20.32■□□□□ 0.84
SH3TC1-210ENST00000506360 NGDNQ8NEJ9 315 aaKnown RBP20.31■□□□□ 0.84
SH3TC1-210ENST00000506360 TCERG1O14776 1098 aaKnown RBP20.31■□□□□ 0.84
SH3TC1-210ENST00000506360 SYAP1Q96A49 352 aaPredicted RBP20.31■□□□□ 0.84
SH3TC1-210ENST00000506360 EID1Q9Y6B2 187 aa20.31■□□□□ 0.84
SH3TC1-210ENST00000506360 FMN1Q68DA7 1419 aa20.3■□□□□ 0.84
SH3TC1-210ENST00000506360 HDAC5Q9UQL6 1122 aa20.3■□□□□ 0.84
SH3TC1-210ENST00000506360 TPM4P67936 248 aa20.29■□□□□ 0.84
SH3TC1-210ENST00000506360 NOC3LQ8WTT2 800 aaKnown RBP20.29■□□□□ 0.84
SH3TC1-210ENST00000506360 CLUAP1Q96AJ1 413 aa20.29■□□□□ 0.84
SH3TC1-210ENST00000506360 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.845e-8■■■■□ 19.4
SH3TC1-210ENST00000506360 AMPHP49418 695 aa20.28■□□□□ 0.84
SH3TC1-210ENST00000506360 G3V3G9 751 aa20.28■□□□□ 0.84
SH3TC1-210ENST00000506360 DCAF8Q5TAQ9 597 aa20.28■□□□□ 0.84
SH3TC1-210ENST00000506360 LTV1Q96GA3 475 aaPredicted RBP20.28■□□□□ 0.84
SH3TC1-210ENST00000506360 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
SH3TC1-210ENST00000506360 NOL8Q76FK4 1167 aaKnown RBP20.27■□□□□ 0.84
SH3TC1-210ENST00000506360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.27■□□□□ 0.83
SH3TC1-210ENST00000506360 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
SH3TC1-210ENST00000506360 WASHC2CQ9Y4E1 1318 aa20.26■□□□□ 0.83
SH3TC1-210ENST00000506360 LMOD3Q0VAK6 560 aa20.25■□□□□ 0.83
SH3TC1-210ENST00000506360 CENPJQ9HC77 1338 aaPredicted RBP20.25■□□□□ 0.83
SH3TC1-210ENST00000506360 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
SH3TC1-210ENST00000506360 RASSF8Q8NHQ8 419 aa20.25■□□□□ 0.83
SH3TC1-210ENST00000506360 CCDC34Q96HJ3 373 aa20.24■□□□□ 0.83
SH3TC1-210ENST00000506360 NUTM2FA1L443 756 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms