RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 KLHL34Q8N239 644 aa3.27□□□□□ -1.89
ITGA1-204ENST00000506275 LTV1Q96GA3 475 aaPredicted RBP3.27□□□□□ -1.89
ITGA1-204ENST00000506275 ZNF428Q96B54 188 aa3.27□□□□□ -1.89
ITGA1-204ENST00000506275 CFAP53Q96M91 514 aa3.27□□□□□ -1.89
ITGA1-204ENST00000506275 CFAP44Q96MT7 982 aa3.27□□□□□ -1.89
ITGA1-204ENST00000506275 DEKP35659 375 aaKnown RBP3.26□□□□□ -1.89
ITGA1-204ENST00000506275 PPP4R3CPQ6ZMV5 832 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 DDRGK1Q96HY6 314 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 DCAF11Q8TEB1 546 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 ANP32EQ9BTT0 268 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 GGT6Q6P531 493 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 SAMD1Q6SPF0 538 aaPredicted RBP3.26□□□□□ -1.89
ITGA1-204ENST00000506275 NOP58Q9Y2X3 529 aaKnown RBP3.26□□□□□ -1.89
ITGA1-204ENST00000506275 PATL2C9JE40 543 aaKnown RBP3.26□□□□□ -1.89
ITGA1-204ENST00000506275 PRKCSHP14314 528 aaPredicted RBP3.26□□□□□ -1.89
ITGA1-204ENST00000506275 SLC4A10Q6U841 1118 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 NGEFQ8N5V2 710 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 NOC3LQ8WTT2 800 aaKnown RBP3.26□□□□□ -1.89
ITGA1-204ENST00000506275 MSNP26038 577 aaKnown RBP3.26□□□□□ -1.89
ITGA1-204ENST00000506275 SLC4A3P48751 1232 aa3.26□□□□□ -1.89
ITGA1-204ENST00000506275 ELL2O00472 640 aaPredicted RBP3.25□□□□□ -1.89
ITGA1-204ENST00000506275 RAD21O60216 631 aa3.25□□□□□ -1.89
ITGA1-204ENST00000506275 PNNQ9H307 717 aaKnown RBP3.25□□□□□ -1.89
ITGA1-204ENST00000506275 PES1O00541 588 aaKnown RBP3.25□□□□□ -1.89
ITGA1-204ENST00000506275 HSP90B1P14625 803 aaKnown RBP3.25□□□□□ -1.89
ITGA1-204ENST00000506275 VPS53Q5VIR6 699 aa3.25□□□□□ -1.89
ITGA1-204ENST00000506275 CSB-PGBD3P0DP91 1061 aa3.25□□□□□ -1.89
ITGA1-204ENST00000506275 TRIM6-TRIM34B2RNG4 842 aa3.25□□□□□ -1.89
ITGA1-204ENST00000506275 BCL2L13Q9BXK5 485 aa3.25□□□□□ -1.89
ITGA1-204ENST00000506275 TOMM22Q9NS69 142 aa3.25□□□□□ -1.89
ITGA1-204ENST00000506275 CCDC146Q8IYE0 955 aa3.24□□□□□ -1.89
ITGA1-204ENST00000506275 CFDP1Q9UEE9 299 aaPredicted RBP3.24□□□□□ -1.89
ITGA1-204ENST00000506275 TCERG1O14776 1098 aaKnown RBP3.24□□□□□ -1.89
ITGA1-204ENST00000506275 HSCBQ8IWL3 235 aa3.24□□□□□ -1.89
ITGA1-204ENST00000506275 NECTIN2Q92692 538 aa3.24□□□□□ -1.89
ITGA1-204ENST00000506275 PLEKHD1A6NEE1 506 aa3.24□□□□□ -1.89
ITGA1-204ENST00000506275 FRAT2O75474 233 aaPredicted RBP3.24□□□□□ -1.89
ITGA1-204ENST00000506275 MFAP1P55081 439 aaKnown RBP3.24□□□□□ -1.89
ITGA1-204ENST00000506275 NUDCQ9Y266 331 aa3.24□□□□□ -1.89
ITGA1-204ENST00000506275 A0A0U1RQG5 324 aaPredicted RBP3.24□□□□□ -1.89
ITGA1-204ENST00000506275 GORABQ5T7V8 394 aa3.24□□□□□ -1.89
ITGA1-204ENST00000506275 CHAF1AQ13111 956 aaPredicted RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 RASSF8Q8NHQ8 419 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 MSH5O43196 834 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 U2AF1L5P0DN76 240 aaPredicted RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 U2AF1Q01081 240 aaKnown RBP eCLIP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 CCAR2Q8N163 923 aaKnown RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 RTF1Q92541 710 aaKnown RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 FBXW7Q969H0 707 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 TIMELESSQ9UNS1 1208 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 RBM19Q9Y4C8 960 aaKnown RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 ITPRIPQ8IWB1 547 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 RRP7AQ9Y3A4 280 aaKnown RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 TAF7LQ5H9L4 462 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 KIAA1211Q6ZU35 1233 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 BAZ1BQ9UIG0 1483 aaKnown RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 G3V3G9 751 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 KDM4AO75164 1064 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 DCAF8Q5TAQ9 597 aa3.23□□□□□ -1.89
ITGA1-204ENST00000506275 GTF2E1P29083 439 aaPredicted RBP3.23□□□□□ -1.89
ITGA1-204ENST00000506275 MORC1Q86VD1 984 aa3.22□□□□□ -1.89
ITGA1-204ENST00000506275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.22□□□□□ -1.89
ITGA1-204ENST00000506275 NRDCO43847 1150 aa3.22□□□□□ -1.89
ITGA1-204ENST00000506275 DHX37Q8IY37 1157 aaKnown RBP3.22□□□□□ -1.89
ITGA1-204ENST00000506275 PPP4R2Q9NY27 417 aa3.22□□□□□ -1.89
ITGA1-204ENST00000506275 PLIN1O60240 522 aa3.22□□□□□ -1.89
ITGA1-204ENST00000506275 TNNT3P45378 269 aaPredicted RBP3.22□□□□□ -1.89
ITGA1-204ENST00000506275 FOSBP53539 338 aa3.22□□□□□ -1.89
ITGA1-204ENST00000506275 GOLGA6L6A8MZA4 724 aa3.22□□□□□ -1.89
ITGA1-204ENST00000506275 SYTL4Q96C24 671 aaPredicted RBP3.22□□□□□ -1.89
ITGA1-204ENST00000506275 MTMR7Q9Y216 660 aa3.22□□□□□ -1.89
ITGA1-204ENST00000506275 C11orf95C9JLR9 678 aaPredicted RBP3.21□□□□□ -1.9
ITGA1-204ENST00000506275 GOLGA4Q13439 2230 aaKnown RBP3.21□□□□□ -1.9
ITGA1-204ENST00000506275 ZCCHC6Q5VYS8 1495 aaKnown RBP3.21□□□□□ -1.9
ITGA1-204ENST00000506275 RILPL2Q969X0 211 aa3.21□□□□□ -1.9
ITGA1-204ENST00000506275 CHMP4CQ96CF2 233 aa3.21□□□□□ -1.9
ITGA1-204ENST00000506275 MARCH6O60337 910 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 PTMSP20962 102 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 KIAA2012Q0VF49 1180 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 SKIDA1Q1XH10 827 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 L1TD1Q5T7N2 865 aaKnown RBP3.2□□□□□ -1.9
ITGA1-204ENST00000506275 ZNF592Q92610 1267 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 STK11IPQ8N1F8 1099 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 SCRIBQ14160 1630 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 MCCP23508 829 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 SMC4Q9NTJ3 1288 aa3.2□□□□□ -1.9
ITGA1-204ENST00000506275 CNKSR2Q8WXI2 1034 aa3.19□□□□□ -1.9
ITGA1-204ENST00000506275 SF3A1Q15459 793 aaKnown RBP3.19□□□□□ -1.9
ITGA1-204ENST00000506275 MCTP1Q6DN14 999 aa3.19□□□□□ -1.9
ITGA1-204ENST00000506275 USP35Q9P2H5 1018 aa3.19□□□□□ -1.9
ITGA1-204ENST00000506275 EIF2S2P20042 333 aaKnown RBP3.19□□□□□ -1.9
ITGA1-204ENST00000506275 CDCA8Q53HL2 280 aa3.19□□□□□ -1.9
ITGA1-204ENST00000506275 FAM177BA6PVY3 158 aa3.19□□□□□ -1.9
ITGA1-204ENST00000506275 TMF1P82094 1093 aa3.19□□□□□ -1.9
ITGA1-204ENST00000506275 MPNDQ8N594 471 aa3.19□□□□□ -1.9
ITGA1-204ENST00000506275 NGDNQ8NEJ9 315 aaKnown RBP3.19□□□□□ -1.9
ITGA1-204ENST00000506275 PPP1R1BQ9UD71 204 aaPredicted RBP3.19□□□□□ -1.9
ITGA1-204ENST00000506275 RCAN3Q9UKA8 241 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 TRAK1Q9UPV9 953 aa3.18□□□□□ -1.9
ITGA1-204ENST00000506275 CLIP1P30622 1438 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms