RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
LINC01339-201ENST00000505712 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
LINC01339-201ENST00000505712 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
LINC01339-201ENST00000505712 FAM205CA6NFA0 338 aa11.96□□□□□ -0.49
LINC01339-201ENST00000505712 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
LINC01339-201ENST00000505712 C2orf72A6NCS6 295 aa11.9□□□□□ -0.5
LINC01339-201ENST00000505712 KIF3CO14782 793 aa11.9□□□□□ -0.5
LINC01339-201ENST00000505712 PPP1R37O75864 691 aa11.9□□□□□ -0.5
LINC01339-201ENST00000505712 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
LINC01339-201ENST00000505712 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
LINC01339-201ENST00000505712 ERBB3P21860 1342 aa11.88□□□□□ -0.51
LINC01339-201ENST00000505712 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
LINC01339-201ENST00000505712 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
LINC01339-201ENST00000505712 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
LINC01339-201ENST00000505712 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
LINC01339-201ENST00000505712 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
LINC01339-201ENST00000505712 ARSIQ5FYB1 569 aa11.82□□□□□ -0.52
LINC01339-201ENST00000505712 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
LINC01339-201ENST00000505712 KRTAP3-3Q9BYR6 98 aa11.81□□□□□ -0.52
LINC01339-201ENST00000505712 KRTAP3-2Q9BYR7 98 aa11.81□□□□□ -0.52
LINC01339-201ENST00000505712 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
LINC01339-201ENST00000505712 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
LINC01339-201ENST00000505712 SLC34A2O95436 690 aa11.78□□□□□ -0.52
LINC01339-201ENST00000505712 NISCHQ9Y2I1 1504 aa11.75□□□□□ -0.53
LINC01339-201ENST00000505712 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
LINC01339-201ENST00000505712 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01339-201ENST00000505712 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
LINC01339-201ENST00000505712 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
LINC01339-201ENST00000505712 FOXK1P85037 733 aa11.73□□□□□ -0.53
LINC01339-201ENST00000505712 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
LINC01339-201ENST00000505712 PCDHGA4Q9Y5G9 962 aa11.73□□□□□ -0.53
LINC01339-201ENST00000505712 NUDT7P0C024 238 aa11.71□□□□□ -0.53
LINC01339-201ENST00000505712 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
LINC01339-201ENST00000505712 DSG2Q14126 1118 aa11.67□□□□□ -0.54
LINC01339-201ENST00000505712 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
LINC01339-201ENST00000505712 PTCD2Q8WV60 388 aaKnown RBP11.66□□□□□ -0.54
LINC01339-201ENST00000505712 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
LINC01339-201ENST00000505712 CRISPLD2Q9H0B8 497 aa11.63□□□□□ -0.55
LINC01339-201ENST00000505712 TBC1D12O60347 775 aa11.62□□□□□ -0.55
LINC01339-201ENST00000505712 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
LINC01339-201ENST00000505712 PBX2P40425 430 aa11.6□□□□□ -0.55
LINC01339-201ENST00000505712 PDE4AP27815 886 aa11.59□□□□□ -0.55
LINC01339-201ENST00000505712 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
LINC01339-201ENST00000505712 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.56
LINC01339-201ENST00000505712 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
LINC01339-201ENST00000505712 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
LINC01339-201ENST00000505712 PTGER2P43116 358 aa11.56□□□□□ -0.56
LINC01339-201ENST00000505712 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC01339-201ENST00000505712 ANKRD13DQ6ZTN6 518 aa11.54□□□□□ -0.56
LINC01339-201ENST00000505712 OXER1Q8TDS5 423 aa11.53□□□□□ -0.56
LINC01339-201ENST00000505712 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
LINC01339-201ENST00000505712 MYT1LQ9UL68 1186 aa11.52□□□□□ -0.57
LINC01339-201ENST00000505712 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01339-201ENST00000505712 RNF166Q96A37 237 aaPredicted RBP11.51□□□□□ -0.57
LINC01339-201ENST00000505712 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
LINC01339-201ENST00000505712 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
LINC01339-201ENST00000505712 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
LINC01339-201ENST00000505712 ARHGAP33O14559 1287 aa11.48□□□□□ -0.57
LINC01339-201ENST00000505712 POTEEQ6S8J3 1075 aa11.48□□□□□ -0.57
LINC01339-201ENST00000505712 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
LINC01339-201ENST00000505712 MFSD10Q14728 455 aa11.47□□□□□ -0.57
LINC01339-201ENST00000505712 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
LINC01339-201ENST00000505712 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
LINC01339-201ENST00000505712 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
LINC01339-201ENST00000505712 ADGRD1Q6QNK2 874 aa11.4□□□□□ -0.58
LINC01339-201ENST00000505712 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
LINC01339-201ENST00000505712 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.4□□□□□ -0.58
LINC01339-201ENST00000505712 EVI5O60447 810 aa11.39□□□□□ -0.59
LINC01339-201ENST00000505712 MAP3K9P80192 1104 aa11.39□□□□□ -0.59
LINC01339-201ENST00000505712 TK2O00142 265 aa11.38□□□□□ -0.59
LINC01339-201ENST00000505712 PSEN2P49810 448 aa11.38□□□□□ -0.59
LINC01339-201ENST00000505712 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
LINC01339-201ENST00000505712 SPRYD3Q8NCJ5 442 aa11.37□□□□□ -0.59
LINC01339-201ENST00000505712 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
LINC01339-201ENST00000505712 FOSBP53539 338 aa11.36□□□□□ -0.59
LINC01339-201ENST00000505712 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
LINC01339-201ENST00000505712 EMILIN3Q9NT22 766 aa11.36□□□□□ -0.59
LINC01339-201ENST00000505712 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
LINC01339-201ENST00000505712 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
LINC01339-201ENST00000505712 PTPREP23469 700 aa11.3□□□□□ -0.6
LINC01339-201ENST00000505712 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
LINC01339-201ENST00000505712 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
LINC01339-201ENST00000505712 HRO43593 1189 aa11.29□□□□□ -0.6
LINC01339-201ENST00000505712 STAC3Q96MF2 364 aa11.29□□□□□ -0.6
LINC01339-201ENST00000505712 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
LINC01339-201ENST00000505712 SLC4A5Q9BY07 1137 aa11.26□□□□□ -0.61
LINC01339-201ENST00000505712 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
LINC01339-201ENST00000505712 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
LINC01339-201ENST00000505712 ADAM33Q9BZ11 813 aa11.25□□□□□ -0.61
LINC01339-201ENST00000505712 DPYSL4O14531 572 aa11.23□□□□□ -0.61
LINC01339-201ENST00000505712 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
LINC01339-201ENST00000505712 HCSTQ9UBK5 93 aa11.23□□□□□ -0.61
LINC01339-201ENST00000505712 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
LINC01339-201ENST00000505712 PHF14O94880 888 aa11.22□□□□□ -0.61
LINC01339-201ENST00000505712 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.61
LINC01339-201ENST00000505712 ZBED2Q9BTP6 218 aa11.21□□□□□ -0.61
LINC01339-201ENST00000505712 PPP1R3GB7ZBB8 358 aa11.17□□□□□ -0.62
LINC01339-201ENST00000505712 KCTD12Q96CX2 325 aaKnown RBP11.17□□□□□ -0.62
LINC01339-201ENST00000505712 EPAS1Q99814 870 aa11.17□□□□□ -0.62
LINC01339-201ENST00000505712 WDR70Q9NW82 654 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms