RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 RRP7BPQ9NSQ0 103 aa6.73□□□□□ -1.33
MATR3-211ENST00000505625 MAPK8IP3Q9UPT6 1336 aa6.73□□□□□ -1.33
MATR3-211ENST00000505625 MAP3K9P80192 1104 aa6.73□□□□□ -1.33
MATR3-211ENST00000505625 KIAA2012Q0VF49 1180 aa6.72□□□□□ -1.33
MATR3-211ENST00000505625 CSRNP3Q8WYN3 585 aa6.72□□□□□ -1.33
MATR3-211ENST00000505625 L1TD1Q5T7N2 865 aaKnown RBP6.72□□□□□ -1.33
MATR3-211ENST00000505625 HIRIP3Q9BW71 556 aaPredicted RBP6.72□□□□□ -1.33
MATR3-211ENST00000505625 PAF1Q8N7H5 531 aa6.71□□□□□ -1.33
MATR3-211ENST00000505625 PLEKHD1A6NEE1 506 aa6.71□□□□□ -1.34
MATR3-211ENST00000505625 TOMM22Q9NS69 142 aa6.71□□□□□ -1.34
MATR3-211ENST00000505625 EID1Q9Y6B2 187 aa6.71□□□□□ -1.34
MATR3-211ENST00000505625 EIF4G1Q04637 1599 aaKnown RBP6.71□□□□□ -1.34
MATR3-211ENST00000505625 CFAP53Q96M91 514 aa6.7□□□□□ -1.34
MATR3-211ENST00000505625 TONSLQ96HA7 1378 aa6.7□□□□□ -1.34
MATR3-211ENST00000505625 CHMP4BP1P59074 171 aa6.7□□□□□ -1.34
MATR3-211ENST00000505625 RASSF8Q8NHQ8 419 aa6.7□□□□□ -1.34
MATR3-211ENST00000505625 PTMAP06454 111 aaKnown RBP6.7□□□□□ -1.34
MATR3-211ENST00000505625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.7□□□□□ -1.346e-7■■■■■ 50.1
MATR3-211ENST00000505625 CA8P35219 290 aa6.69□□□□□ -1.34
MATR3-211ENST00000505625 HSP90B1P14625 803 aaKnown RBP6.69□□□□□ -1.34
MATR3-211ENST00000505625 PPP4R2Q9NY27 417 aa6.69□□□□□ -1.34
MATR3-211ENST00000505625 USP35Q9P2H5 1018 aa6.69□□□□□ -1.34
MATR3-211ENST00000505625 ECM2O94769 699 aaPredicted RBP6.69□□□□□ -1.34
MATR3-211ENST00000505625 TMEM132AQ24JP5 1023 aa6.69□□□□□ -1.34
MATR3-211ENST00000505625 AK7Q96M32 723 aa6.69□□□□□ -1.34
MATR3-211ENST00000505625 DNTTIP2Q5QJE6 756 aaKnown RBP6.69□□□□□ -1.34
MATR3-211ENST00000505625 A0A0U1RQG5 324 aaPredicted RBP6.68□□□□□ -1.34
MATR3-211ENST00000505625 NGDNQ8NEJ9 315 aaKnown RBP6.68□□□□□ -1.34
MATR3-211ENST00000505625 PNNQ9H307 717 aaKnown RBP6.68□□□□□ -1.34
MATR3-211ENST00000505625 ANP32EQ9BTT0 268 aa6.67□□□□□ -1.34
MATR3-211ENST00000505625 IRX6P78412 446 aaPredicted RBP6.67□□□□□ -1.34
MATR3-211ENST00000505625 TMEM87AQ8NBN3 555 aa6.67□□□□□ -1.34
MATR3-211ENST00000505625 HRCP23327 699 aa6.67□□□□□ -1.34
MATR3-211ENST00000505625 CC2D1BQ5T0F9 858 aaKnown RBP6.67□□□□□ -1.34
MATR3-211ENST00000505625 STAC3Q96MF2 364 aa6.67□□□□□ -1.34
MATR3-211ENST00000505625 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
MATR3-211ENST00000505625 FRAT1Q92837 279 aaPredicted RBP6.66□□□□□ -1.34
MATR3-211ENST00000505625 NOL10Q9BSC4 688 aaKnown RBP6.66□□□□□ -1.34
MATR3-211ENST00000505625 HNRNPUQ00839 825 aaKnown RBP eCLIP6.66□□□□□ -1.34
MATR3-211ENST00000505625 FYB1O15117 783 aa6.66□□□□□ -1.34
MATR3-211ENST00000505625 FAM177BA6PVY3 158 aa6.66□□□□□ -1.34
MATR3-211ENST00000505625 MTMR7Q9Y216 660 aa6.65□□□□□ -1.34
MATR3-211ENST00000505625 TTLL12Q14166 644 aaPredicted RBP6.65□□□□□ -1.34
MATR3-211ENST00000505625 RBM33Q96EV2 1170 aaKnown RBP6.65□□□□□ -1.35
MATR3-211ENST00000505625 DHX16O60231 1041 aaKnown RBP6.65□□□□□ -1.35
MATR3-211ENST00000505625 KAT6BQ8WYB5 2073 aa6.65□□□□□ -1.35
MATR3-211ENST00000505625 RB1CC1Q8TDY2 1594 aa6.64□□□□□ -1.35
MATR3-211ENST00000505625 CEP89Q96ST8 783 aa6.64□□□□□ -1.35
MATR3-211ENST00000505625 KNSTRNQ9Y448 316 aa6.64□□□□□ -1.35
MATR3-211ENST00000505625 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
MATR3-211ENST00000505625 MTUS2Q5JR59 1369 aa6.63□□□□□ -1.35
MATR3-211ENST00000505625 WWC2Q6AWC2 1192 aa6.63□□□□□ -1.35
MATR3-211ENST00000505625 GOLGA6L6A8MZA4 724 aa6.63□□□□□ -1.35
MATR3-211ENST00000505625 ATF3P18847 181 aa6.63□□□□□ -1.35
MATR3-211ENST00000505625 IKQ13123 557 aaPredicted RBP6.63□□□□□ -1.35
MATR3-211ENST00000505625 CCDC97Q96F63 343 aaPredicted RBP6.63□□□□□ -1.35
MATR3-211ENST00000505625 KANK1Q14678 1352 aa6.63□□□□□ -1.35
MATR3-211ENST00000505625 PES1O00541 588 aaKnown RBP6.62□□□□□ -1.35
MATR3-211ENST00000505625 ACIN1Q9UKV3 1341 aaKnown RBP6.62□□□□□ -1.35
MATR3-211ENST00000505625 NUDCQ9Y266 331 aa6.62□□□□□ -1.35
MATR3-211ENST00000505625 CCDC43Q96MW1 224 aaKnown RBP6.62□□□□□ -1.35
MATR3-211ENST00000505625 GOLGA6L4A6NEF3 574 aa6.62□□□□□ -1.35
MATR3-211ENST00000505625 AMPHP49418 695 aa6.62□□□□□ -1.35
MATR3-211ENST00000505625 PODXL2Q9NZ53 605 aa6.62□□□□□ -1.35
MATR3-211ENST00000505625 RBM5P52756 815 aaKnown RBP eCLIP6.61□□□□□ -1.35
MATR3-211ENST00000505625 DDX10Q13206 875 aaKnown RBP6.61□□□□□ -1.35
MATR3-211ENST00000505625 STRN4Q9NRL3 753 aa6.61□□□□□ -1.35
MATR3-211ENST00000505625 TCERG1O14776 1098 aaKnown RBP6.61□□□□□ -1.35
MATR3-211ENST00000505625 CHAF1AQ13111 956 aaPredicted RBP6.61□□□□□ -1.35
MATR3-211ENST00000505625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.61□□□□□ -1.35
MATR3-211ENST00000505625 WWC3Q9ULE0 1092 aa6.61□□□□□ -1.35
MATR3-211ENST00000505625 AMOTL1Q8IY63 956 aa6.61□□□□□ -1.35
MATR3-211ENST00000505625 KCNA4P22459 653 aa6.6□□□□□ -1.35
MATR3-211ENST00000505625 CCDC136Q96JN2 1154 aa6.6□□□□□ -1.35
MATR3-211ENST00000505625 CCDC180Q9P1Z9 1646 aa6.6□□□□□ -1.35
MATR3-211ENST00000505625 PSME1Q06323 249 aa6.6□□□□□ -1.35
MATR3-211ENST00000505625 RSPH4AQ5TD94 716 aa6.59□□□□□ -1.35
MATR3-211ENST00000505625 FOXD4L1Q9NU39 408 aa6.59□□□□□ -1.35
MATR3-211ENST00000505625 CFDP1Q9UEE9 299 aaPredicted RBP6.59□□□□□ -1.35
MATR3-211ENST00000505625 TTC16Q8NEE8 873 aa6.59□□□□□ -1.35
MATR3-211ENST00000505625 CRBNQ96SW2 442 aa6.59□□□□□ -1.35
MATR3-211ENST00000505625 HSP90AB1P08238 724 aaKnown RBP6.59□□□□□ -1.36
MATR3-211ENST00000505625 ZNF219Q9P2Y4 722 aaPredicted RBP6.58□□□□□ -1.36
MATR3-211ENST00000505625 PLIN1O60240 522 aa6.58□□□□□ -1.36
MATR3-211ENST00000505625 C1orf141Q5JVX7 400 aa6.58□□□□□ -1.36
MATR3-211ENST00000505625 SLC4A10Q6U841 1118 aa6.58□□□□□ -1.36
MATR3-211ENST00000505625 DDRGK1Q96HY6 314 aa6.58□□□□□ -1.36
MATR3-211ENST00000505625 CLEC11AQ9Y240 323 aa6.58□□□□□ -1.36
MATR3-211ENST00000505625 CCDC27Q2M243 656 aa6.58□□□□□ -1.36
MATR3-211ENST00000505625 ZNF428Q96B54 188 aa6.57□□□□□ -1.36
MATR3-211ENST00000505625 R3HCC1Q9Y3T6 440 aaKnown RBP6.57□□□□□ -1.36
MATR3-211ENST00000505625 HDGFL2Q7Z4V5 671 aaPredicted RBP6.57□□□□□ -1.36
MATR3-211ENST00000505625 KDM4AO75164 1064 aa6.57□□□□□ -1.36
MATR3-211ENST00000505625 PATL2C9JE40 543 aaKnown RBP6.57□□□□□ -1.36
MATR3-211ENST00000505625 NECTIN2Q92692 538 aa6.57□□□□□ -1.36
MATR3-211ENST00000505625 NUTM2GQ5VZR2 741 aa6.57□□□□□ -1.36
MATR3-211ENST00000505625 GOLGA6L22H0YM25 854 aa6.57□□□□□ -1.36
MATR3-211ENST00000505625 ATP2B2Q01814 1243 aa6.57□□□□□ -1.36
MATR3-211ENST00000505625 RFX1P22670 979 aa6.56□□□□□ -1.36
MATR3-211ENST00000505625 MRS2Q9HD23 443 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms