RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
NFKB1-205ENST00000505458 ABCC5O15440 1437 aa16.37■□□□□ 0.21
NFKB1-205ENST00000505458 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
NFKB1-205ENST00000505458 CDC42BPAQ5VT25 1732 aa16.37■□□□□ 0.21
NFKB1-205ENST00000505458 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
NFKB1-205ENST00000505458 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
NFKB1-205ENST00000505458 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
NFKB1-205ENST00000505458 ARID3CA6NKF2 412 aa16.32■□□□□ 0.2
NFKB1-205ENST00000505458 PREX2Q70Z35 1606 aa16.32■□□□□ 0.2
NFKB1-205ENST00000505458 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
NFKB1-205ENST00000505458 ANKRD30AQ9BXX3 1397 aa16.29■□□□□ 0.2
NFKB1-205ENST00000505458 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
NFKB1-205ENST00000505458 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
NFKB1-205ENST00000505458 RRP7BPQ9NSQ0 103 aa16.27■□□□□ 0.2
NFKB1-205ENST00000505458 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
NFKB1-205ENST00000505458 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
NFKB1-205ENST00000505458 CENPBP07199 599 aaPredicted RBP16.24■□□□□ 0.19
NFKB1-205ENST00000505458 MYO5CQ9NQX4 1742 aa16.24■□□□□ 0.19
NFKB1-205ENST00000505458 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
NFKB1-205ENST00000505458 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
NFKB1-205ENST00000505458 KDM6BO15054 1643 aa16.23■□□□□ 0.19
NFKB1-205ENST00000505458 MAST1Q9Y2H9 1570 aa16.23■□□□□ 0.19
NFKB1-205ENST00000505458 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
NFKB1-205ENST00000505458 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
NFKB1-205ENST00000505458 CCDC141Q6ZP82 1450 aa16.22■□□□□ 0.19
NFKB1-205ENST00000505458 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
NFKB1-205ENST00000505458 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.19
NFKB1-205ENST00000505458 C9orf84Q5VXU9 1444 aa16.21■□□□□ 0.19
NFKB1-205ENST00000505458 ARAP3Q8WWN8 1544 aa16.21■□□□□ 0.18
NFKB1-205ENST00000505458 ZCCHC11Q5TAX3 1644 aaKnown RBP16.2■□□□□ 0.18
NFKB1-205ENST00000505458 MPHOSPH9Q99550 1183 aa16.2■□□□□ 0.18
NFKB1-205ENST00000505458 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
NFKB1-205ENST00000505458 ZNF644Q9H582 1327 aaPredicted RBP16.2■□□□□ 0.18
NFKB1-205ENST00000505458 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
NFKB1-205ENST00000505458 ERCC6L2Q5T890 1561 aa16.19■□□□□ 0.18
NFKB1-205ENST00000505458 TSPY4P0CV99 314 aa16.19■□□□□ 0.18
NFKB1-205ENST00000505458 TSPY10P0CW01 314 aa16.19■□□□□ 0.18
NFKB1-205ENST00000505458 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
NFKB1-205ENST00000505458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.17■□□□□ 0.18
NFKB1-205ENST00000505458 ANKRD50Q9ULJ7 1429 aa16.17■□□□□ 0.18
NFKB1-205ENST00000505458 DENND4BO75064 1496 aaPredicted RBP16.17■□□□□ 0.18
NFKB1-205ENST00000505458 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
NFKB1-205ENST00000505458 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
NFKB1-205ENST00000505458 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
NFKB1-205ENST00000505458 ARHGAP5Q13017 1502 aa16.16■□□□□ 0.18
NFKB1-205ENST00000505458 RPRD2Q5VT52 1461 aaKnown RBP16.16■□□□□ 0.18
NFKB1-205ENST00000505458 PLXNC1O60486 1568 aa16.15■□□□□ 0.18
NFKB1-205ENST00000505458 ANKRD30BQ9BXX2 1392 aa16.14■□□□□ 0.17
NFKB1-205ENST00000505458 PZPP20742 1482 aa16.13■□□□□ 0.17
NFKB1-205ENST00000505458 PLCH2O75038 1416 aa16.11■□□□□ 0.17
NFKB1-205ENST00000505458 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
NFKB1-205ENST00000505458 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
NFKB1-205ENST00000505458 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
NFKB1-205ENST00000505458 MIER1Q8N108 512 aa16.08■□□□□ 0.17
NFKB1-205ENST00000505458 WDR7Q9Y4E6 1490 aa16.07■□□□□ 0.16
NFKB1-205ENST00000505458 UNC13BO14795 1591 aa16.07■□□□□ 0.16
NFKB1-205ENST00000505458 EFCAB2Q5VUJ9 269 aa16.06■□□□□ 0.16
NFKB1-205ENST00000505458 ABCC1P33527 1531 aa16.06■□□□□ 0.16
NFKB1-205ENST00000505458 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
NFKB1-205ENST00000505458 DUOX2Q9NRD8 1548 aa16.06■□□□□ 0.16
NFKB1-205ENST00000505458 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
NFKB1-205ENST00000505458 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
NFKB1-205ENST00000505458 ERBINQ96RT1 1412 aa16.04■□□□□ 0.16
NFKB1-205ENST00000505458 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.16
NFKB1-205ENST00000505458 NUP155O75694 1391 aa16.02■□□□□ 0.15
NFKB1-205ENST00000505458 HNRNPMP52272 730 aaKnown RBP eCLIP16.02■□□□□ 0.15
NFKB1-205ENST00000505458 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
NFKB1-205ENST00000505458 IQGAP3Q86VI3 1631 aa16■□□□□ 0.15
NFKB1-205ENST00000505458 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
NFKB1-205ENST00000505458 CFAP74Q9C0B2 1584 aa15.99■□□□□ 0.15
NFKB1-205ENST00000505458 FAM135AQ9P2D6 1515 aa15.98■□□□□ 0.15
NFKB1-205ENST00000505458 L3MBTL2Q969R5 705 aa15.97■□□□□ 0.15
NFKB1-205ENST00000505458 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
NFKB1-205ENST00000505458 PKD2Q13563 968 aa15.97■□□□□ 0.15
NFKB1-205ENST00000505458 POLR1AO95602 1720 aaPredicted RBP15.96■□□□□ 0.14
NFKB1-205ENST00000505458 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
NFKB1-205ENST00000505458 KCNH8Q96L42 1107 aa15.94■□□□□ 0.14
NFKB1-205ENST00000505458 ZFYVE16Q7Z3T8 1539 aa15.92■□□□□ 0.14
NFKB1-205ENST00000505458 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
NFKB1-205ENST00000505458 ATP10AO60312 1499 aa15.92■□□□□ 0.14
NFKB1-205ENST00000505458 ASXL2Q76L83 1435 aa15.92■□□□□ 0.14
NFKB1-205ENST00000505458 EIF2AK4Q9P2K8 1649 aaKnown RBP15.91■□□□□ 0.14
NFKB1-205ENST00000505458 CCER2I3L3R5 266 aa15.91■□□□□ 0.14
NFKB1-205ENST00000505458 FANCAO15360 1455 aa15.91■□□□□ 0.14
NFKB1-205ENST00000505458 INO80Q9ULG1 1556 aaPredicted RBP15.91■□□□□ 0.14
NFKB1-205ENST00000505458 FOXD1Q16676 465 aa15.9■□□□□ 0.14
NFKB1-205ENST00000505458 RALGAPBQ86X10 1494 aa15.89■□□□□ 0.13
NFKB1-205ENST00000505458 ANP32CO43423 234 aa15.89■□□□□ 0.13
NFKB1-205ENST00000505458 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
NFKB1-205ENST00000505458 SPAG9O60271 1321 aaKnown RBP15.88■□□□□ 0.13
NFKB1-205ENST00000505458 DEPDC5O75140 1603 aa15.88■□□□□ 0.13
NFKB1-205ENST00000505458 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
NFKB1-205ENST00000505458 ATP7AQ04656 1500 aa15.87■□□□□ 0.13
NFKB1-205ENST00000505458 CCDC144AA2RUR9 1427 aa15.87■□□□□ 0.13
NFKB1-205ENST00000505458 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
NFKB1-205ENST00000505458 TRAPPC8Q9Y2L5 1435 aa15.87■□□□□ 0.13
NFKB1-205ENST00000505458 ADGRL1O94910 1474 aa15.86■□□□□ 0.13
NFKB1-205ENST00000505458 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
NFKB1-205ENST00000505458 ZNF518AQ6AHZ1 1483 aa15.83■□□□□ 0.12
NFKB1-205ENST00000505458 KANK1Q14678 1352 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms