RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
HMGCR-204ENST00000504466 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
HMGCR-204ENST00000504466 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
HMGCR-204ENST00000504466 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
HMGCR-204ENST00000504466 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
HMGCR-204ENST00000504466 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
HMGCR-204ENST00000504466 KIF3CO14782 793 aa11.85□□□□□ -0.51
HMGCR-204ENST00000504466 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
HMGCR-204ENST00000504466 KRTAP3-3Q9BYR6 98 aa11.81□□□□□ -0.52
HMGCR-204ENST00000504466 KRTAP3-2Q9BYR7 98 aa11.81□□□□□ -0.52
HMGCR-204ENST00000504466 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
HMGCR-204ENST00000504466 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
HMGCR-204ENST00000504466 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
HMGCR-204ENST00000504466 PPP1R37O75864 691 aa11.78□□□□□ -0.52
HMGCR-204ENST00000504466 C2orf72A6NCS6 295 aa11.77□□□□□ -0.53
HMGCR-204ENST00000504466 ERBB3P21860 1342 aa11.75□□□□□ -0.53
HMGCR-204ENST00000504466 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
HMGCR-204ENST00000504466 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
HMGCR-204ENST00000504466 SLC34A2O95436 690 aa11.72□□□□□ -0.53
HMGCR-204ENST00000504466 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
HMGCR-204ENST00000504466 ARSIQ5FYB1 569 aa11.71□□□□□ -0.53
HMGCR-204ENST00000504466 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
HMGCR-204ENST00000504466 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
HMGCR-204ENST00000504466 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
HMGCR-204ENST00000504466 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
HMGCR-204ENST00000504466 NISCHQ9Y2I1 1504 aa11.65□□□□□ -0.54
HMGCR-204ENST00000504466 KHSRPQ92945 711 aaKnown RBP eCLIP11.64□□□□□ -0.552e-15■■■□□ 15.7
HMGCR-204ENST00000504466 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
HMGCR-204ENST00000504466 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
HMGCR-204ENST00000504466 FOXK1P85037 733 aa11.61□□□□□ -0.55
HMGCR-204ENST00000504466 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
HMGCR-204ENST00000504466 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
HMGCR-204ENST00000504466 PTCD2Q8WV60 388 aaKnown RBP11.58□□□□□ -0.56
HMGCR-204ENST00000504466 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
HMGCR-204ENST00000504466 NUDT7P0C024 238 aa11.57□□□□□ -0.56
HMGCR-204ENST00000504466 PLPP6Q8IY26 295 aa11.54□□□□□ -0.56
HMGCR-204ENST00000504466 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
HMGCR-204ENST00000504466 DSG2Q14126 1118 aa11.53□□□□□ -0.56
HMGCR-204ENST00000504466 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
HMGCR-204ENST00000504466 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
HMGCR-204ENST00000504466 PBX2P40425 430 aa11.49□□□□□ -0.57
HMGCR-204ENST00000504466 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
HMGCR-204ENST00000504466 PTGER2P43116 358 aa11.46□□□□□ -0.57
HMGCR-204ENST00000504466 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
HMGCR-204ENST00000504466 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.58
HMGCR-204ENST00000504466 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
HMGCR-204ENST00000504466 TBC1D12O60347 775 aa11.43□□□□□ -0.58
HMGCR-204ENST00000504466 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
HMGCR-204ENST00000504466 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
HMGCR-204ENST00000504466 PDE4AP27815 886 aa11.41□□□□□ -0.58
HMGCR-204ENST00000504466 RNF166Q96A37 237 aaPredicted RBP11.41□□□□□ -0.58
HMGCR-204ENST00000504466 PPP1R15BQ5SWA1 713 aa11.4□□□□□ -0.58
HMGCR-204ENST00000504466 ANKRD13DQ6ZTN6 518 aa11.4□□□□□ -0.58
HMGCR-204ENST00000504466 ARHGAP33O14559 1287 aa11.37□□□□□ -0.59
HMGCR-204ENST00000504466 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
HMGCR-204ENST00000504466 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
HMGCR-204ENST00000504466 MFSD10Q14728 455 aa11.36□□□□□ -0.59
HMGCR-204ENST00000504466 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
HMGCR-204ENST00000504466 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
HMGCR-204ENST00000504466 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
HMGCR-204ENST00000504466 SLC24A1O60721 1099 aa11.31□□□□□ -0.6
HMGCR-204ENST00000504466 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
HMGCR-204ENST00000504466 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
HMGCR-204ENST00000504466 TK2O00142 265 aa11.3□□□□□ -0.6
HMGCR-204ENST00000504466 ADGRD1Q6QNK2 874 aa11.29□□□□□ -0.6
HMGCR-204ENST00000504466 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
HMGCR-204ENST00000504466 PSEN2P49810 448 aa11.27□□□□□ -0.61
HMGCR-204ENST00000504466 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.61
HMGCR-204ENST00000504466 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.61
HMGCR-204ENST00000504466 HRO43593 1189 aa11.26□□□□□ -0.61
HMGCR-204ENST00000504466 FOSBP53539 338 aa11.25□□□□□ -0.61
HMGCR-204ENST00000504466 EMILIN3Q9NT22 766 aa11.24□□□□□ -0.61
HMGCR-204ENST00000504466 EVI5O60447 810 aa11.23□□□□□ -0.61
HMGCR-204ENST00000504466 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
HMGCR-204ENST00000504466 ZNF454Q8N9F8 522 aa11.22□□□□□ -0.61
HMGCR-204ENST00000504466 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
HMGCR-204ENST00000504466 CAMK2BQ13554 666 aa11.2□□□□□ -0.62
HMGCR-204ENST00000504466 SLC4A5Q9BY07 1137 aa11.2□□□□□ -0.62
HMGCR-204ENST00000504466 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
HMGCR-204ENST00000504466 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
HMGCR-204ENST00000504466 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
HMGCR-204ENST00000504466 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
HMGCR-204ENST00000504466 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
HMGCR-204ENST00000504466 PTPREP23469 700 aa11.14□□□□□ -0.63
HMGCR-204ENST00000504466 ADAM33Q9BZ11 813 aa11.13□□□□□ -0.63
HMGCR-204ENST00000504466 HCSTQ9UBK5 93 aa11.13□□□□□ -0.63
HMGCR-204ENST00000504466 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
HMGCR-204ENST00000504466 ZBED2Q9BTP6 218 aa11.12□□□□□ -0.63
HMGCR-204ENST00000504466 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
HMGCR-204ENST00000504466 PCDHGA10Q9Y5H3 936 aa11.11□□□□□ -0.63
HMGCR-204ENST00000504466 PHF14O94880 888 aa11.08□□□□□ -0.64
HMGCR-204ENST00000504466 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
HMGCR-204ENST00000504466 FBXW7Q969H0 707 aa11.07□□□□□ -0.64
HMGCR-204ENST00000504466 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
HMGCR-204ENST00000504466 STAC3Q96MF2 364 aa11.05□□□□□ -0.64
HMGCR-204ENST00000504466 DPYSL4O14531 572 aa11.04□□□□□ -0.64
HMGCR-204ENST00000504466 PPP1R3GB7ZBB8 358 aa11.03□□□□□ -0.64
HMGCR-204ENST00000504466 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
HMGCR-204ENST00000504466 EPAS1Q99814 870 aa11.02□□□□□ -0.65
HMGCR-204ENST00000504466 COL9A1P20849 921 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms