RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 LRRIQ1Q96JM4 1722 aa10.13□□□□□ -0.79
LSM3P4-201ENST00000502948 SIGLEC1Q9BZZ2 1709 aa10.13□□□□□ -0.79
LSM3P4-201ENST00000502948 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
LSM3P4-201ENST00000502948 FER1L4A9Z1Z3 1794 aa10.12□□□□□ -0.79
LSM3P4-201ENST00000502948 EFCAB2Q5VUJ9 269 aa10.12□□□□□ -0.79
LSM3P4-201ENST00000502948 TROQ12816 1431 aaPredicted RBP10.12□□□□□ -0.79
LSM3P4-201ENST00000502948 SCAPERQ9BY12 1400 aa10.12□□□□□ -0.79
LSM3P4-201ENST00000502948 ATP10AO60312 1499 aa10.11□□□□□ -0.79
LSM3P4-201ENST00000502948 YEATS2Q9ULM3 1422 aa10.11□□□□□ -0.79
LSM3P4-201ENST00000502948 ARHGEF12Q9NZN5 1544 aa10.11□□□□□ -0.79
LSM3P4-201ENST00000502948 CCDC18Q5T9S5 1454 aa10.1□□□□□ -0.79
LSM3P4-201ENST00000502948 ARID4BQ4LE39 1312 aaPredicted RBP10.1□□□□□ -0.79
LSM3P4-201ENST00000502948 CLIP1P30622 1438 aa10.1□□□□□ -0.79
LSM3P4-201ENST00000502948 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
LSM3P4-201ENST00000502948 UBTFP17480 764 aaKnown RBP10.1□□□□□ -0.79
LSM3P4-201ENST00000502948 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
LSM3P4-201ENST00000502948 SETD1BQ9UPS6 1966 aaKnown RBP10.09□□□□□ -0.79
LSM3P4-201ENST00000502948 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
LSM3P4-201ENST00000502948 CASKIN1Q8WXD9 1431 aa10.08□□□□□ -0.8
LSM3P4-201ENST00000502948 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
LSM3P4-201ENST00000502948 FBXO41Q8TF61 875 aa10.08□□□□□ -0.8
LSM3P4-201ENST00000502948 MLH3Q9UHC1 1453 aa10.08□□□□□ -0.8
LSM3P4-201ENST00000502948 PREX1Q8TCU6 1659 aa10.08□□□□□ -0.8
LSM3P4-201ENST00000502948 AGLP35573 1532 aa10.07□□□□□ -0.8
LSM3P4-201ENST00000502948 ARHGAP5Q13017 1502 aa10.07□□□□□ -0.8
LSM3P4-201ENST00000502948 FYCO1Q9BQS8 1478 aa10.05□□□□□ -0.8
LSM3P4-201ENST00000502948 ABCC1P33527 1531 aa10.05□□□□□ -0.8
LSM3P4-201ENST00000502948 ITSN2Q9NZM3 1697 aa10.05□□□□□ -0.8
LSM3P4-201ENST00000502948 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
LSM3P4-201ENST00000502948 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
LSM3P4-201ENST00000502948 KIDINS220Q9ULH0 1771 aa10.02□□□□□ -0.81
LSM3P4-201ENST00000502948 ABCA6Q8N139 1617 aa10.02□□□□□ -0.81
LSM3P4-201ENST00000502948 MROH2AA6NES4 1674 aa10□□□□□ -0.81
LSM3P4-201ENST00000502948 AFAP1Q8N556 730 aa10□□□□□ -0.81
LSM3P4-201ENST00000502948 ATP1B4Q9UN42 357 aaPredicted RBP10□□□□□ -0.81
LSM3P4-201ENST00000502948 C3P01024 1663 aa9.99□□□□□ -0.81
LSM3P4-201ENST00000502948 CNTLNQ9NXG0 1405 aa9.99□□□□□ -0.81
LSM3P4-201ENST00000502948 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
LSM3P4-201ENST00000502948 TRAPPC8Q9Y2L5 1435 aa9.99□□□□□ -0.81
LSM3P4-201ENST00000502948 STRCQ7RTU9 1775 aa9.98□□□□□ -0.81
LSM3P4-201ENST00000502948 PLEKHH2Q8IVE3 1493 aa9.98□□□□□ -0.81
LSM3P4-201ENST00000502948 DMRT2Q9Y5R5 561 aa9.98□□□□□ -0.81
LSM3P4-201ENST00000502948 GPATCH8Q9UKJ3 1502 aaKnown RBP9.97□□□□□ -0.81
LSM3P4-201ENST00000502948 SAMD9LQ8IVG5 1584 aa9.97□□□□□ -0.81
LSM3P4-201ENST00000502948 UHRF1BP1Q6BDS2 1440 aa9.97□□□□□ -0.81
LSM3P4-201ENST00000502948 HSPA2P54652 639 aa9.96□□□□□ -0.82
LSM3P4-201ENST00000502948 NPATQ14207 1427 aa9.96□□□□□ -0.82
LSM3P4-201ENST00000502948 PLXNC1O60486 1568 aa9.96□□□□□ -0.82
LSM3P4-201ENST00000502948 INO80Q9ULG1 1556 aaPredicted RBP9.96□□□□□ -0.82
LSM3P4-201ENST00000502948 MLECQ14165 292 aa9.95□□□□□ -0.82
LSM3P4-201ENST00000502948 PTPRTO14522 1441 aa9.95□□□□□ -0.82
LSM3P4-201ENST00000502948 PPP6R1Q9UPN7 881 aa9.94□□□□□ -0.82
LSM3P4-201ENST00000502948 ADGBQ8N7X0 1667 aa9.93□□□□□ -0.82
LSM3P4-201ENST00000502948 ATP7AQ04656 1500 aa9.93□□□□□ -0.82
LSM3P4-201ENST00000502948 SYCP2Q9BX26 1530 aa9.93□□□□□ -0.82
LSM3P4-201ENST00000502948 CERKQ8TCT0 537 aa9.93□□□□□ -0.82
LSM3P4-201ENST00000502948 IQSEC2Q5JU85 1478 aa9.92□□□□□ -0.82
LSM3P4-201ENST00000502948 EHBP1L1Q8N3D4 1523 aa9.92□□□□□ -0.82
LSM3P4-201ENST00000502948 FAM135AQ9P2D6 1515 aa9.92□□□□□ -0.82
LSM3P4-201ENST00000502948 RTEL1-TNFRSF6BF6WH68 1400 aa9.91□□□□□ -0.82
LSM3P4-201ENST00000502948 ZNF142P52746 1687 aaPredicted RBP9.91□□□□□ -0.82
LSM3P4-201ENST00000502948 CEBPAP49715 358 aaPredicted RBP9.91□□□□□ -0.82
LSM3P4-201ENST00000502948 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
LSM3P4-201ENST00000502948 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
LSM3P4-201ENST00000502948 EHMT2Q96KQ7 1210 aa9.9□□□□□ -0.82
LSM3P4-201ENST00000502948 MYT1LQ9UL68 1186 aa9.9□□□□□ -0.82
LSM3P4-201ENST00000502948 A2MP01023 1474 aa9.9□□□□□ -0.83
LSM3P4-201ENST00000502948 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.83
LSM3P4-201ENST00000502948 CEP162Q5TB80 1403 aa9.9□□□□□ -0.83
LSM3P4-201ENST00000502948 CCNB3Q8WWL7 1395 aa9.89□□□□□ -0.83
LSM3P4-201ENST00000502948 TIAM1Q13009 1591 aa9.89□□□□□ -0.83
LSM3P4-201ENST00000502948 CFDP1Q9UEE9 299 aaPredicted RBP9.89□□□□□ -0.83
LSM3P4-201ENST00000502948 PLA2R1Q13018 1463 aa9.89□□□□□ -0.83
LSM3P4-201ENST00000502948 MBD5Q9P267 1494 aa9.89□□□□□ -0.83
LSM3P4-201ENST00000502948 NCOA1Q15788 1441 aa9.89□□□□□ -0.83
LSM3P4-201ENST00000502948 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
LSM3P4-201ENST00000502948 MTUS2Q5JR59 1369 aa9.88□□□□□ -0.83
LSM3P4-201ENST00000502948 RSPH4AQ5TD94 716 aa9.88□□□□□ -0.83
LSM3P4-201ENST00000502948 LTBP4Q8N2S1 1624 aa9.88□□□□□ -0.83
LSM3P4-201ENST00000502948 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
LSM3P4-201ENST00000502948 PLPPR3Q6T4P5 718 aa9.87□□□□□ -0.83
LSM3P4-201ENST00000502948 MYO3AQ8NEV4 1616 aa9.86□□□□□ -0.83
LSM3P4-201ENST00000502948 HNRNPMP52272 730 aaKnown RBP eCLIP9.86□□□□□ -0.83
LSM3P4-201ENST00000502948 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
LSM3P4-201ENST00000502948 PTPRKQ15262 1439 aa9.85□□□□□ -0.83
LSM3P4-201ENST00000502948 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
LSM3P4-201ENST00000502948 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
LSM3P4-201ENST00000502948 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
LSM3P4-201ENST00000502948 PKD2Q13563 968 aa9.84□□□□□ -0.83
LSM3P4-201ENST00000502948 DHX29Q7Z478 1369 aaKnown RBP9.84□□□□□ -0.83
LSM3P4-201ENST00000502948 ARHGEF5Q12774 1597 aa9.84□□□□□ -0.83
LSM3P4-201ENST00000502948 CCDC141Q6ZP82 1450 aa9.83□□□□□ -0.84
LSM3P4-201ENST00000502948 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
LSM3P4-201ENST00000502948 NCOA2Q15596 1464 aa9.82□□□□□ -0.84
LSM3P4-201ENST00000502948 A2ML1A8K2U0 1454 aa9.81□□□□□ -0.84
LSM3P4-201ENST00000502948 DNMT1P26358 1616 aaKnown RBP9.81□□□□□ -0.84
LSM3P4-201ENST00000502948 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
LSM3P4-201ENST00000502948 KDM5DQ9BY66 1539 aa9.8□□□□□ -0.84
LSM3P4-201ENST00000502948 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
LSM3P4-201ENST00000502948 PZPP20742 1482 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms