RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
HMGN1P12-201ENST00000499125 MFRPQ9BY79 579 aa10.37□□□□□ -0.75
HMGN1P12-201ENST00000499125 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
HMGN1P12-201ENST00000499125 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
HMGN1P12-201ENST00000499125 SPNS2Q8IVW8 549 aa10.35□□□□□ -0.75
HMGN1P12-201ENST00000499125 ERBB3P21860 1342 aa10.33□□□□□ -0.76
HMGN1P12-201ENST00000499125 ZSWIM6Q9HCJ5 1215 aa10.31□□□□□ -0.76
HMGN1P12-201ENST00000499125 MMRN1Q13201 1228 aa10.3□□□□□ -0.76
HMGN1P12-201ENST00000499125 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
HMGN1P12-201ENST00000499125 KRTAP3-2Q9BYR7 98 aa10.29□□□□□ -0.76
HMGN1P12-201ENST00000499125 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
HMGN1P12-201ENST00000499125 VARS2Q5ST30 1063 aaKnown RBP10.26□□□□□ -0.77
HMGN1P12-201ENST00000499125 C2orf72A6NCS6 295 aa10.23□□□□□ -0.77
HMGN1P12-201ENST00000499125 ARSIQ5FYB1 569 aa10.23□□□□□ -0.77
HMGN1P12-201ENST00000499125 KIF3CO14782 793 aa10.21□□□□□ -0.77
HMGN1P12-201ENST00000499125 PPP1R37O75864 691 aa10.2□□□□□ -0.78
HMGN1P12-201ENST00000499125 TMC2Q8TDI7 906 aa10.2□□□□□ -0.78
HMGN1P12-201ENST00000499125 HS6ST3Q8IZP7 471 aa10.19□□□□□ -0.78
HMGN1P12-201ENST00000499125 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
HMGN1P12-201ENST00000499125 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
HMGN1P12-201ENST00000499125 CHGAP10645 457 aaKnown RBP10.17□□□□□ -0.78
HMGN1P12-201ENST00000499125 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P12-201ENST00000499125 SLC34A2O95436 690 aa10.12□□□□□ -0.79
HMGN1P12-201ENST00000499125 NUDT7P0C024 238 aa10.12□□□□□ -0.79
HMGN1P12-201ENST00000499125 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
HMGN1P12-201ENST00000499125 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
HMGN1P12-201ENST00000499125 LHX6Q9UPM6 363 aa10.06□□□□□ -0.8
HMGN1P12-201ENST00000499125 GPHNQ9NQX3 736 aaPredicted RBP10.05□□□□□ -0.8
HMGN1P12-201ENST00000499125 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
HMGN1P12-201ENST00000499125 FOXK1P85037 733 aa10.04□□□□□ -0.8
HMGN1P12-201ENST00000499125 NKX1-1Q15270 411 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P12-201ENST00000499125 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
HMGN1P12-201ENST00000499125 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P12-201ENST00000499125 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
HMGN1P12-201ENST00000499125 DNAJC5Q9H3Z4 198 aa10.03□□□□□ -0.8
HMGN1P12-201ENST00000499125 PTCD2Q8WV60 388 aaKnown RBP10.01□□□□□ -0.81
HMGN1P12-201ENST00000499125 PBX2P40425 430 aa10□□□□□ -0.81
HMGN1P12-201ENST00000499125 PTGER2P43116 358 aa10□□□□□ -0.81
HMGN1P12-201ENST00000499125 LSM11P83369 360 aaKnown RBP eCLIP10□□□□□ -0.81
HMGN1P12-201ENST00000499125 DSG2Q14126 1118 aa10□□□□□ -0.81
HMGN1P12-201ENST00000499125 TBC1D12O60347 775 aa9.98□□□□□ -0.81
HMGN1P12-201ENST00000499125 AXIN2Q9Y2T1 843 aa9.98□□□□□ -0.81
HMGN1P12-201ENST00000499125 PSDA5PKW4 1024 aaPredicted RBP9.97□□□□□ -0.81
HMGN1P12-201ENST00000499125 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
HMGN1P12-201ENST00000499125 POTEEQ6S8J3 1075 aa9.95□□□□□ -0.82
HMGN1P12-201ENST00000499125 KDM4FA0A1W2PPD8 638 aa9.94□□□□□ -0.82
HMGN1P12-201ENST00000499125 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
HMGN1P12-201ENST00000499125 CRISPLD2Q9H0B8 497 aa9.91□□□□□ -0.82
HMGN1P12-201ENST00000499125 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P12-201ENST00000499125 PDE4AP27815 886 aa9.9□□□□□ -0.82
HMGN1P12-201ENST00000499125 UPF1Q92900 1129 aaKnown RBP eCLIP9.9□□□□□ -0.82
HMGN1P12-201ENST00000499125 PPP4R3BQ5MIZ7 849 aa9.89□□□□□ -0.83
HMGN1P12-201ENST00000499125 PPP1R15BQ5SWA1 713 aa9.89□□□□□ -0.83
HMGN1P12-201ENST00000499125 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
HMGN1P12-201ENST00000499125 ADGRD1Q6QNK2 874 aa9.87□□□□□ -0.83
HMGN1P12-201ENST00000499125 NCKAP5LQ9HCH0 1330 aa9.86□□□□□ -0.83
HMGN1P12-201ENST00000499125 PSEN2P49810 448 aa9.85□□□□□ -0.83
HMGN1P12-201ENST00000499125 LARP6Q9BRS8 491 aaKnown RBP9.84□□□□□ -0.83
HMGN1P12-201ENST00000499125 TK2O00142 265 aa9.83□□□□□ -0.84
HMGN1P12-201ENST00000499125 DMRTA1Q5VZB9 504 aa9.83□□□□□ -0.84
HMGN1P12-201ENST00000499125 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
HMGN1P12-201ENST00000499125 DDX27Q96GQ7 796 aaKnown RBP9.82□□□□□ -0.84
HMGN1P12-201ENST00000499125 ZNF454Q8N9F8 522 aa9.81□□□□□ -0.84
HMGN1P12-201ENST00000499125 STAC3Q96MF2 364 aa9.8□□□□□ -0.84
HMGN1P12-201ENST00000499125 KCNK17Q96T54 332 aa9.8□□□□□ -0.84
HMGN1P12-201ENST00000499125 HRO43593 1189 aa9.77□□□□□ -0.85
HMGN1P12-201ENST00000499125 EVI5O60447 810 aa9.77□□□□□ -0.85
HMGN1P12-201ENST00000499125 MAP3K9P80192 1104 aa9.77□□□□□ -0.85
HMGN1P12-201ENST00000499125 HCSTQ9UBK5 93 aa9.77□□□□□ -0.85
HMGN1P12-201ENST00000499125 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
HMGN1P12-201ENST00000499125 FOSBP53539 338 aa9.75□□□□□ -0.85
HMGN1P12-201ENST00000499125 MFSD10Q14728 455 aa9.75□□□□□ -0.85
HMGN1P12-201ENST00000499125 BCL2L12Q9HB09 334 aa9.75□□□□□ -0.85
HMGN1P12-201ENST00000499125 PTPREP23469 700 aa9.72□□□□□ -0.85
HMGN1P12-201ENST00000499125 CADPS2Q86UW7 1296 aa9.72□□□□□ -0.85
HMGN1P12-201ENST00000499125 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
HMGN1P12-201ENST00000499125 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
HMGN1P12-201ENST00000499125 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
HMGN1P12-201ENST00000499125 EMILIN3Q9NT22 766 aa9.71□□□□□ -0.86
HMGN1P12-201ENST00000499125 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
HMGN1P12-201ENST00000499125 PLA2G2EQ9NZK7 142 aa9.69□□□□□ -0.86
HMGN1P12-201ENST00000499125 SLC4A5Q9BY07 1137 aa9.68□□□□□ -0.86
HMGN1P12-201ENST00000499125 BBXQ8WY36 941 aaPredicted RBP9.67□□□□□ -0.86
HMGN1P12-201ENST00000499125 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
HMGN1P12-201ENST00000499125 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
HMGN1P12-201ENST00000499125 PCDHGA10Q9Y5H3 936 aa9.64□□□□□ -0.87
HMGN1P12-201ENST00000499125 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
HMGN1P12-201ENST00000499125 BHMG1C9JSJ3 638 aaPredicted RBP9.62□□□□□ -0.87
HMGN1P12-201ENST00000499125 PTPN5P54829 565 aa9.62□□□□□ -0.87
HMGN1P12-201ENST00000499125 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
HMGN1P12-201ENST00000499125 PHF14O94880 888 aa9.6□□□□□ -0.87
HMGN1P12-201ENST00000499125 CAMK2BQ13554 666 aa9.6□□□□□ -0.87
HMGN1P12-201ENST00000499125 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
HMGN1P12-201ENST00000499125 DPYSL4O14531 572 aa9.59□□□□□ -0.87
HMGN1P12-201ENST00000499125 TYW1BQ6NUM6 668 aa9.59□□□□□ -0.87
HMGN1P12-201ENST00000499125 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
HMGN1P12-201ENST00000499125 NBPF3Q9H094 633 aa9.59□□□□□ -0.87
HMGN1P12-201ENST00000499125 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
HMGN1P12-201ENST00000499125 PPP1R3GB7ZBB8 358 aa9.58□□□□□ -0.88
HMGN1P12-201ENST00000499125 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms