RNA–Protein interactions for RNA: ENST00000497146.5

PTGER3-211, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-211ENST00000497146 ACIN1Q9UKV3 1341 aaKnown RBP31.41■■■□□ 2.62
PTGER3-211ENST00000497146 ABCC5O15440 1437 aa31.4■■■□□ 2.62
PTGER3-211ENST00000497146 CHIC2Q9UKJ5 165 aa31.39■■■□□ 2.62
PTGER3-211ENST00000497146 ZNF644Q9H582 1327 aaPredicted RBP31.37■■■□□ 2.61
PTGER3-211ENST00000497146 RRP7BPQ9NSQ0 103 aa31.37■■■□□ 2.61
PTGER3-211ENST00000497146 CROCC2H7BZ55 1655 aa31.35■■■□□ 2.61
PTGER3-211ENST00000497146 ADGBQ8N7X0 1667 aa31.34■■■□□ 2.61
PTGER3-211ENST00000497146 UHRF1BP1LA0JNW5 1464 aa31.33■■■□□ 2.61
PTGER3-211ENST00000497146 TIMELESSQ9UNS1 1208 aa31.33■■■□□ 2.61
PTGER3-211ENST00000497146 SIN3AQ96ST3 1273 aa31.3■■■□□ 2.6
PTGER3-211ENST00000497146 PREX2Q70Z35 1606 aa31.28■■■□□ 2.6
PTGER3-211ENST00000497146 ZNF777Q9ULD5 760 aaPredicted RBP31.25■■■□□ 2.59
PTGER3-211ENST00000497146 ADGRL2O95490 1459 aa31.24■■■□□ 2.59
PTGER3-211ENST00000497146 SHANK2Q9UPX8 1470 aa31.24■■■□□ 2.59
PTGER3-211ENST00000497146 NEUROD1Q13562 356 aa31.23■■■□□ 2.59
PTGER3-211ENST00000497146 KDM6BO15054 1643 aa31.23■■■□□ 2.59
PTGER3-211ENST00000497146 ZCCHC11Q5TAX3 1644 aaKnown RBP31.23■■■□□ 2.59
PTGER3-211ENST00000497146 KDM5BQ9UGL1 1544 aa31.22■■■□□ 2.59
PTGER3-211ENST00000497146 CDC42BPBQ9Y5S2 1711 aa31.19■■■□□ 2.58
PTGER3-211ENST00000497146 ARHGEF5Q12774 1597 aa31.18■■■□□ 2.58
PTGER3-211ENST00000497146 NCOA1Q15788 1441 aa31.17■■■□□ 2.58
PTGER3-211ENST00000497146 TTC37Q6PGP7 1564 aa31.16■■■□□ 2.58
PTGER3-211ENST00000497146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.16■■■□□ 2.58
PTGER3-211ENST00000497146 MYO5CQ9NQX4 1742 aa31.16■■■□□ 2.58
PTGER3-211ENST00000497146 ANKRD30AQ9BXX3 1397 aa31.16■■■□□ 2.58
PTGER3-211ENST00000497146 TRIM52Q96A61 297 aa31.15■■■□□ 2.58
PTGER3-211ENST00000497146 SAMD9LQ8IVG5 1584 aa31.12■■■□□ 2.57
PTGER3-211ENST00000497146 ARHGAP5Q13017 1502 aa31.09■■■□□ 2.57
PTGER3-211ENST00000497146 C9orf84Q5VXU9 1444 aa31.09■■■□□ 2.57
PTGER3-211ENST00000497146 TONSLQ96HA7 1378 aa31.09■■■□□ 2.57
PTGER3-211ENST00000497146 CCDC141Q6ZP82 1450 aa31.07■■■□□ 2.56
PTGER3-211ENST00000497146 DENND4BO75064 1496 aaPredicted RBP31.07■■■□□ 2.56
PTGER3-211ENST00000497146 RSPH4AQ5TD94 716 aa31.06■■■□□ 2.56
PTGER3-211ENST00000497146 OSCARQ8IYS5 282 aa31.06■■■□□ 2.56
PTGER3-211ENST00000497146 PPP1R15AO75807 674 aaPredicted RBP31.05■■■□□ 2.56
PTGER3-211ENST00000497146 TSPY4P0CV99 314 aa31.05■■■□□ 2.56
PTGER3-211ENST00000497146 TSPY10P0CW01 314 aa31.05■■■□□ 2.56
PTGER3-211ENST00000497146 MPHOSPH9Q99550 1183 aa31.05■■■□□ 2.56
PTGER3-211ENST00000497146 PLEKHH2Q8IVE3 1493 aa31.05■■■□□ 2.56
PTGER3-211ENST00000497146 MBD5Q9P267 1494 aa31.05■■■□□ 2.56
PTGER3-211ENST00000497146 ANKRD50Q9ULJ7 1429 aa31■■■□□ 2.55
PTGER3-211ENST00000497146 SYCP2Q9BX26 1530 aa30.98■■■□□ 2.55
PTGER3-211ENST00000497146 KIAA1107Q9UPP5 1409 aa30.98■■■□□ 2.55
PTGER3-211ENST00000497146 PLCH2O75038 1416 aa30.96■■■□□ 2.55
PTGER3-211ENST00000497146 MAST1Q9Y2H9 1570 aa30.95■■■□□ 2.55
PTGER3-211ENST00000497146 HNRNPMP52272 730 aaKnown RBP eCLIP30.95■■■□□ 2.54
PTGER3-211ENST00000497146 KCNH8Q96L42 1107 aa30.95■■■□□ 2.54
PTGER3-211ENST00000497146 ARAP3Q8WWN8 1544 aa30.94■■■□□ 2.54
PTGER3-211ENST00000497146 WDR7Q9Y4E6 1490 aa30.93■■■□□ 2.54
PTGER3-211ENST00000497146 SLC4A1APQ9BWU0 796 aaKnown RBP30.91■■■□□ 2.54
PTGER3-211ENST00000497146 KIF15Q9NS87 1388 aa30.91■■■□□ 2.54
PTGER3-211ENST00000497146 PZPP20742 1482 aa30.89■■■□□ 2.54
PTGER3-211ENST00000497146 MIER1Q8N108 512 aa30.86■■■□□ 2.53
PTGER3-211ENST00000497146 PLXNC1O60486 1568 aa30.85■■■□□ 2.53
PTGER3-211ENST00000497146 EFCAB2Q5VUJ9 269 aa30.85■■■□□ 2.53
PTGER3-211ENST00000497146 KDM5DQ9BY66 1539 aa30.85■■■□□ 2.53
PTGER3-211ENST00000497146 ANKRD30BQ9BXX2 1392 aa30.85■■■□□ 2.53
PTGER3-211ENST00000497146 ABCC1P33527 1531 aa30.84■■■□□ 2.53
PTGER3-211ENST00000497146 FOXD1Q16676 465 aa30.83■■■□□ 2.53
PTGER3-211ENST00000497146 RPRD2Q5VT52 1461 aaKnown RBP30.83■■■□□ 2.53
PTGER3-211ENST00000497146 ABCA9Q8IUA7 1624 aa30.81■■■□□ 2.52
PTGER3-211ENST00000497146 ASXL2Q76L83 1435 aa30.76■■■□□ 2.51
PTGER3-211ENST00000497146 ARHGEF12Q9NZN5 1544 aa30.75■■■□□ 2.51
PTGER3-211ENST00000497146 NUP155O75694 1391 aa30.75■■■□□ 2.51
PTGER3-211ENST00000497146 NPM1P06748 294 aaKnown RBP eCLIP30.72■■■□□ 2.51
PTGER3-211ENST00000497146 DUOX2Q9NRD8 1548 aa30.71■■■□□ 2.51
PTGER3-211ENST00000497146 UNC13BO14795 1591 aa30.69■■■□□ 2.5
PTGER3-211ENST00000497146 TEX14Q8IWB6 1497 aa30.68■■■□□ 2.5
PTGER3-211ENST00000497146 FANCAO15360 1455 aa30.68■■■□□ 2.5
PTGER3-211ENST00000497146 PKD2Q13563 968 aa30.67■■■□□ 2.5
PTGER3-211ENST00000497146 L3MBTL2Q969R5 705 aa30.67■■■□□ 2.5
PTGER3-211ENST00000497146 ERBINQ96RT1 1412 aa30.66■■■□□ 2.5
PTGER3-211ENST00000497146 FAM135AQ9P2D6 1515 aa30.63■■■□□ 2.49
PTGER3-211ENST00000497146 RTEL1-TNFRSF6BF6WH68 1400 aa30.62■■■□□ 2.49
PTGER3-211ENST00000497146 TRAPPC8Q9Y2L5 1435 aa30.62■■■□□ 2.49
PTGER3-211ENST00000497146 ZFYVE16Q7Z3T8 1539 aa30.59■■■□□ 2.49
PTGER3-211ENST00000497146 IQGAP3Q86VI3 1631 aa30.56■■■□□ 2.48
PTGER3-211ENST00000497146 HIRIP3Q9BW71 556 aaPredicted RBP30.56■■■□□ 2.48
PTGER3-211ENST00000497146 ADGRL1O94910 1474 aa30.55■■■□□ 2.48
PTGER3-211ENST00000497146 MAGI2Q86UL8 1455 aa30.55■■■□□ 2.48
PTGER3-211ENST00000497146 CFAP74Q9C0B2 1584 aa30.55■■■□□ 2.48
PTGER3-211ENST00000497146 SPAG9O60271 1321 aaKnown RBP30.55■■■□□ 2.48
PTGER3-211ENST00000497146 INO80Q9ULG1 1556 aaPredicted RBP30.52■■■□□ 2.48
PTGER3-211ENST00000497146 CENPBP07199 599 aaPredicted RBP30.51■■■□□ 2.47
PTGER3-211ENST00000497146 ATP7AQ04656 1500 aa30.5■■■□□ 2.47
PTGER3-211ENST00000497146 DDX10Q13206 875 aaKnown RBP30.49■■■□□ 2.47
PTGER3-211ENST00000497146 SCAPERQ9BY12 1400 aa30.46■■■□□ 2.47
PTGER3-211ENST00000497146 NBPF8Q3BBV2 869 aa30.45■■■□□ 2.47
PTGER3-211ENST00000497146 AFAP1Q8N556 730 aa30.45■■■□□ 2.47
PTGER3-211ENST00000497146 CD109Q6YHK3 1445 aa30.43■■■□□ 2.46
PTGER3-211ENST00000497146 EIF4G2P78344 907 aaKnown RBP eCLIP30.42■■■□□ 2.46
PTGER3-211ENST00000497146 ZNF518AQ6AHZ1 1483 aa30.41■■■□□ 2.46
PTGER3-211ENST00000497146 HSPA5P11021 654 aaKnown RBP30.41■■■□□ 2.46
PTGER3-211ENST00000497146 YTHDC1Q96MU7 727 aaKnown RBP30.39■■■□□ 2.46
PTGER3-211ENST00000497146 DEPDC5O75140 1603 aa30.39■■■□□ 2.46
PTGER3-211ENST00000497146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.39■■■□□ 2.46
PTGER3-211ENST00000497146 EIF2AK4Q9P2K8 1649 aaKnown RBP30.39■■■□□ 2.45
PTGER3-211ENST00000497146 CCDC144AA2RUR9 1427 aa30.38■■■□□ 2.45
PTGER3-211ENST00000497146 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
PTGER3-211ENST00000497146 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms