RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
UBP1-213ENST00000496310 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
UBP1-213ENST00000496310 POGZQ7Z3K3 1410 aa12.12□□□□□ -0.47
UBP1-213ENST00000496310 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
UBP1-213ENST00000496310 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
UBP1-213ENST00000496310 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
UBP1-213ENST00000496310 SETD1BQ9UPS6 1966 aaKnown RBP12.1□□□□□ -0.47
UBP1-213ENST00000496310 SOCS7O14512 581 aa12.1□□□□□ -0.47
UBP1-213ENST00000496310 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
UBP1-213ENST00000496310 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
UBP1-213ENST00000496310 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
UBP1-213ENST00000496310 MYO5CQ9NQX4 1742 aa12.07□□□□□ -0.48
UBP1-213ENST00000496310 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
UBP1-213ENST00000496310 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
UBP1-213ENST00000496310 SPATA31D1Q6ZQQ2 1576 aa12.06□□□□□ -0.48
UBP1-213ENST00000496310 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
UBP1-213ENST00000496310 ATP10AO60312 1499 aa12.05□□□□□ -0.48
UBP1-213ENST00000496310 C3P01024 1663 aa12.05□□□□□ -0.48
UBP1-213ENST00000496310 KIF14Q15058 1648 aa12.04□□□□□ -0.48
UBP1-213ENST00000496310 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
UBP1-213ENST00000496310 MAGI2Q86UL8 1455 aa12.03□□□□□ -0.48
UBP1-213ENST00000496310 PLCH2O75038 1416 aa12.03□□□□□ -0.48
UBP1-213ENST00000496310 AFAP1Q8N556 730 aa12.02□□□□□ -0.49
UBP1-213ENST00000496310 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
UBP1-213ENST00000496310 UHRF1BP1Q6BDS2 1440 aa12□□□□□ -0.49
UBP1-213ENST00000496310 CDC42BPBQ9Y5S2 1711 aa12□□□□□ -0.49
UBP1-213ENST00000496310 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
UBP1-213ENST00000496310 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
UBP1-213ENST00000496310 LTBP4Q8N2S1 1624 aa11.98□□□□□ -0.49
UBP1-213ENST00000496310 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
UBP1-213ENST00000496310 EFCAB2Q5VUJ9 269 aa11.98□□□□□ -0.49
UBP1-213ENST00000496310 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
UBP1-213ENST00000496310 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
UBP1-213ENST00000496310 KDM5CP41229 1560 aa11.94□□□□□ -0.5
UBP1-213ENST00000496310 PTPRTO14522 1441 aa11.94□□□□□ -0.5
UBP1-213ENST00000496310 NCKAP5LQ9HCH0 1330 aa11.93□□□□□ -0.5
UBP1-213ENST00000496310 ZNF518AQ6AHZ1 1483 aa11.93□□□□□ -0.5
UBP1-213ENST00000496310 ITSN2Q9NZM3 1697 aa11.93□□□□□ -0.5
UBP1-213ENST00000496310 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
UBP1-213ENST00000496310 ESF1Q9H501 851 aaKnown RBP11.92□□□□□ -0.5
UBP1-213ENST00000496310 CAMSAP1Q5T5Y3 1602 aa11.92□□□□□ -0.5
UBP1-213ENST00000496310 TRAPPC8Q9Y2L5 1435 aa11.92□□□□□ -0.5
UBP1-213ENST00000496310 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
UBP1-213ENST00000496310 ZNF335Q9H4Z2 1342 aaPredicted RBP11.9□□□□□ -0.5
UBP1-213ENST00000496310 NCOA1Q15788 1441 aa11.9□□□□□ -0.5
UBP1-213ENST00000496310 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
UBP1-213ENST00000496310 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
UBP1-213ENST00000496310 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
UBP1-213ENST00000496310 UBAP1LF5GYI3 381 aa11.89□□□□□ -0.51
UBP1-213ENST00000496310 CLTCQ00610 1675 aaKnown RBP11.89□□□□□ -0.51
UBP1-213ENST00000496310 REREQ9P2R6 1566 aa11.88□□□□□ -0.51
UBP1-213ENST00000496310 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
UBP1-213ENST00000496310 EEA1Q15075 1411 aa11.87□□□□□ -0.51
UBP1-213ENST00000496310 ABCC1P33527 1531 aa11.87□□□□□ -0.51
UBP1-213ENST00000496310 CDK11AQ9UQ88 783 aaPredicted RBP11.87□□□□□ -0.51
UBP1-213ENST00000496310 ZNF777Q9ULD5 760 aaPredicted RBP11.86□□□□□ -0.51
UBP1-213ENST00000496310 MLH3Q9UHC1 1453 aa11.86□□□□□ -0.51
UBP1-213ENST00000496310 AGLP35573 1532 aa11.86□□□□□ -0.51
UBP1-213ENST00000496310 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
UBP1-213ENST00000496310 CLIP1P30622 1438 aa11.85□□□□□ -0.51
UBP1-213ENST00000496310 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
UBP1-213ENST00000496310 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
UBP1-213ENST00000496310 IQSEC2Q5JU85 1478 aa11.83□□□□□ -0.52
UBP1-213ENST00000496310 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
UBP1-213ENST00000496310 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.52
UBP1-213ENST00000496310 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
UBP1-213ENST00000496310 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
UBP1-213ENST00000496310 HSPA1LP34931 641 aa11.81□□□□□ -0.52
UBP1-213ENST00000496310 HNRNPMP52272 730 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■■□ 26.3
UBP1-213ENST00000496310 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
UBP1-213ENST00000496310 CNTLNQ9NXG0 1405 aa11.8□□□□□ -0.52
UBP1-213ENST00000496310 SYCP2Q9BX26 1530 aa11.8□□□□□ -0.52
UBP1-213ENST00000496310 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
UBP1-213ENST00000496310 CEP170BQ9Y4F5 1589 aaPredicted RBP11.79□□□□□ -0.52
UBP1-213ENST00000496310 GGT6Q6P531 493 aa11.79□□□□□ -0.52
UBP1-213ENST00000496310 NPATQ14207 1427 aa11.77□□□□□ -0.52
UBP1-213ENST00000496310 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.53
UBP1-213ENST00000496310 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.53
UBP1-213ENST00000496310 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
UBP1-213ENST00000496310 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
UBP1-213ENST00000496310 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
UBP1-213ENST00000496310 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
UBP1-213ENST00000496310 PKD2Q13563 968 aa11.75□□□□□ -0.53
UBP1-213ENST00000496310 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
UBP1-213ENST00000496310 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
UBP1-213ENST00000496310 A2MP01023 1474 aa11.74□□□□□ -0.53
UBP1-213ENST00000496310 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
UBP1-213ENST00000496310 PLA2R1Q13018 1463 aa11.73□□□□□ -0.53
UBP1-213ENST00000496310 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
UBP1-213ENST00000496310 INO80Q9ULG1 1556 aaPredicted RBP11.73□□□□□ -0.53
UBP1-213ENST00000496310 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
UBP1-213ENST00000496310 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
UBP1-213ENST00000496310 FBXO31Q5XUX0 539 aaPredicted RBP11.72□□□□□ -0.53
UBP1-213ENST00000496310 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
UBP1-213ENST00000496310 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.53
UBP1-213ENST00000496310 CCDC18Q5T9S5 1454 aa11.71□□□□□ -0.53
UBP1-213ENST00000496310 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.53
UBP1-213ENST00000496310 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
UBP1-213ENST00000496310 ALKQ9UM73 1620 aa11.69□□□□□ -0.54
UBP1-213ENST00000496310 TOM1O60784 492 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms