RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 HOXB1P14653 301 aaPredicted RBP14.82□□□□□ -0.04
CLTC-208ENST00000496076 FBXO22Q8NEZ5 403 aa14.82□□□□□ -0.04
CLTC-208ENST00000496076 RGL2O15211 777 aa14.79□□□□□ -0.04
CLTC-208ENST00000496076 MFRPQ9BY79 579 aa14.78□□□□□ -0.04
CLTC-208ENST00000496076 RIMBP2O15034 1052 aa14.77□□□□□ -0.05
CLTC-208ENST00000496076 MMRN1Q13201 1228 aa14.76□□□□□ -0.05
CLTC-208ENST00000496076 KRTAP3-3Q9BYR6 98 aa14.75□□□□□ -0.05
CLTC-208ENST00000496076 KRTAP3-2Q9BYR7 98 aa14.75□□□□□ -0.05
CLTC-208ENST00000496076 ERBB3P21860 1342 aa14.72□□□□□ -0.05
CLTC-208ENST00000496076 ZSWIM6Q9HCJ5 1215 aa14.7□□□□□ -0.06
CLTC-208ENST00000496076 GPR153Q6NV75 609 aa14.66□□□□□ -0.06
CLTC-208ENST00000496076 VARS2Q5ST30 1063 aaKnown RBP14.64□□□□□ -0.07
CLTC-208ENST00000496076 ARSIQ5FYB1 569 aa14.6□□□□□ -0.07
CLTC-208ENST00000496076 C2orf72A6NCS6 295 aa14.58□□□□□ -0.08
CLTC-208ENST00000496076 KIF3CO14782 793 aa14.58□□□□□ -0.08
CLTC-208ENST00000496076 KHSRPQ92945 711 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLTC-208ENST00000496076 PPP1R37O75864 691 aa14.53□□□□□ -0.08
CLTC-208ENST00000496076 ZNF687Q8N1G0 1237 aa14.53□□□□□ -0.08
CLTC-208ENST00000496076 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
CLTC-208ENST00000496076 ZNF316A6NFI3 1004 aaPredicted RBP14.47□□□□□ -0.09
CLTC-208ENST00000496076 HS6ST3Q8IZP7 471 aa14.47□□□□□ -0.09
CLTC-208ENST00000496076 SLC34A2O95436 690 aa14.42□□□□□ -0.1
CLTC-208ENST00000496076 NUDT7P0C024 238 aa14.42□□□□□ -0.1
CLTC-208ENST00000496076 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
CLTC-208ENST00000496076 PCDHGA4Q9Y5G9 962 aa14.41□□□□□ -0.1
CLTC-208ENST00000496076 LHX6Q9UPM6 363 aa14.35□□□□□ -0.11
CLTC-208ENST00000496076 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
CLTC-208ENST00000496076 RNF166Q96A37 237 aaPredicted RBP14.34□□□□□ -0.11
CLTC-208ENST00000496076 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
CLTC-208ENST00000496076 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
CLTC-208ENST00000496076 FOXK1P85037 733 aa14.29□□□□□ -0.12
CLTC-208ENST00000496076 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
CLTC-208ENST00000496076 PLPP6Q8IY26 295 aa14.29□□□□□ -0.12
CLTC-208ENST00000496076 LSM11P83369 360 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLTC-208ENST00000496076 DNAJC5Q9H3Z4 198 aa14.27□□□□□ -0.13
CLTC-208ENST00000496076 PTGER2P43116 358 aa14.26□□□□□ -0.13
CLTC-208ENST00000496076 PTCD2Q8WV60 388 aaKnown RBP14.26□□□□□ -0.13
CLTC-208ENST00000496076 PBX2P40425 430 aa14.25□□□□□ -0.13
CLTC-208ENST00000496076 DSG2Q14126 1118 aa14.24□□□□□ -0.13
CLTC-208ENST00000496076 POTEEQ6S8J3 1075 aa14.24□□□□□ -0.13
CLTC-208ENST00000496076 AXIN2Q9Y2T1 843 aa14.24□□□□□ -0.13
CLTC-208ENST00000496076 KDM4FA0A1W2PPD8 638 aa14.22□□□□□ -0.13
CLTC-208ENST00000496076 RYDENQ9NUL5 291 aaKnown RBP14.22□□□□□ -0.13
CLTC-208ENST00000496076 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
CLTC-208ENST00000496076 TBC1D12O60347 775 aa14.17□□□□□ -0.14
CLTC-208ENST00000496076 ARHGAP33O14559 1287 aa14.14□□□□□ -0.15
CLTC-208ENST00000496076 CRISPLD2Q9H0B8 497 aa14.11□□□□□ -0.15
CLTC-208ENST00000496076 OXER1Q8TDS5 423 aa14.08□□□□□ -0.16
CLTC-208ENST00000496076 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
CLTC-208ENST00000496076 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
CLTC-208ENST00000496076 ADGRD1Q6QNK2 874 aa14.07□□□□□ -0.16
CLTC-208ENST00000496076 UPF1Q92900 1129 aaKnown RBP eCLIP14.07□□□□□ -0.16
CLTC-208ENST00000496076 PDE4AP27815 886 aa14.06□□□□□ -0.16
CLTC-208ENST00000496076 PSEN2P49810 448 aa14.06□□□□□ -0.16
CLTC-208ENST00000496076 PPP1R15BQ5SWA1 713 aa14.06□□□□□ -0.16
CLTC-208ENST00000496076 DCAF8L2P0C7V8 631 aa14.05□□□□□ -0.16
CLTC-208ENST00000496076 DMRTA1Q5VZB9 504 aa14.04□□□□□ -0.16
CLTC-208ENST00000496076 NCKAP5LQ9HCH0 1330 aa14.04□□□□□ -0.16
CLTC-208ENST00000496076 TK2O00142 265 aa14.01□□□□□ -0.17
CLTC-208ENST00000496076 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
CLTC-208ENST00000496076 HRO43593 1189 aa13.96□□□□□ -0.17
CLTC-208ENST00000496076 ZNF454Q8N9F8 522 aa13.96□□□□□ -0.17
CLTC-208ENST00000496076 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
CLTC-208ENST00000496076 KCNH8Q96L42 1107 aa13.94□□□□□ -0.18
CLTC-208ENST00000496076 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
CLTC-208ENST00000496076 HCSTQ9UBK5 93 aa13.93□□□□□ -0.18
CLTC-208ENST00000496076 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
CLTC-208ENST00000496076 STAC3Q96MF2 364 aa13.9□□□□□ -0.18
CLTC-208ENST00000496076 EVI5O60447 810 aa13.89□□□□□ -0.19
CLTC-208ENST00000496076 FOSBP53539 338 aa13.89□□□□□ -0.19
CLTC-208ENST00000496076 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
CLTC-208ENST00000496076 MFSD10Q14728 455 aa13.88□□□□□ -0.19
CLTC-208ENST00000496076 MAP3K9P80192 1104 aa13.86□□□□□ -0.19
CLTC-208ENST00000496076 VPS9D1Q9Y2B5 631 aa13.86□□□□□ -0.19
CLTC-208ENST00000496076 KCTD12Q96CX2 325 aaKnown RBP13.84□□□□□ -0.19
CLTC-208ENST00000496076 PTPREP23469 700 aa13.83□□□□□ -0.2
CLTC-208ENST00000496076 CADPS2Q86UW7 1296 aa13.83□□□□□ -0.2
CLTC-208ENST00000496076 JPH4Q96JJ6 628 aa13.83□□□□□ -0.2
CLTC-208ENST00000496076 PLA2G2EQ9NZK7 142 aa13.83□□□□□ -0.2
CLTC-208ENST00000496076 EMILIN3Q9NT22 766 aa13.82□□□□□ -0.2
CLTC-208ENST00000496076 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
CLTC-208ENST00000496076 SLC4A5Q9BY07 1137 aa13.8□□□□□ -0.2
CLTC-208ENST00000496076 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
CLTC-208ENST00000496076 ZBED2Q9BTP6 218 aa13.76□□□□□ -0.21
CLTC-208ENST00000496076 BHMG1C9JSJ3 638 aaPredicted RBP13.74□□□□□ -0.21
CLTC-208ENST00000496076 PCDHGA10Q9Y5H3 936 aa13.72□□□□□ -0.21
CLTC-208ENST00000496076 PTPN5P54829 565 aa13.71□□□□□ -0.21
CLTC-208ENST00000496076 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
CLTC-208ENST00000496076 GOLGA8CPA6NN73 597 aa13.68□□□□□ -0.22
CLTC-208ENST00000496076 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
CLTC-208ENST00000496076 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
CLTC-208ENST00000496076 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
CLTC-208ENST00000496076 PHF14O94880 888 aa13.64□□□□□ -0.23
CLTC-208ENST00000496076 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
CLTC-208ENST00000496076 WNT2BQ93097 391 aa13.64□□□□□ -0.23
CLTC-208ENST00000496076 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
CLTC-208ENST00000496076 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
CLTC-208ENST00000496076 THSD4Q6ZMP0 1018 aa13.63□□□□□ -0.23
CLTC-208ENST00000496076 DPYSL4O14531 572 aa13.62□□□□□ -0.23
CLTC-208ENST00000496076 COL9A1P20849 921 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms