RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 RIMBP2O15034 1052 aa7.42□□□□□ -1.22
LRIF1-203ENST00000494675 CABP2Q9NPB3 220 aa7.41□□□□□ -1.22
LRIF1-203ENST00000494675 AMER1Q5JTC6 1135 aaPredicted RBP7.4□□□□□ -1.23
LRIF1-203ENST00000494675 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
LRIF1-203ENST00000494675 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
LRIF1-203ENST00000494675 ZSWIM6Q9HCJ5 1215 aa7.37□□□□□ -1.23
LRIF1-203ENST00000494675 XP32Q5T750 250 aa7.36□□□□□ -1.23
LRIF1-203ENST00000494675 A0A0G2JS52 829 aa7.33□□□□□ -1.24
LRIF1-203ENST00000494675 RIOK3O14730 519 aaKnown RBP7.33□□□□□ -1.24
LRIF1-203ENST00000494675 TAOK2Q9UL54 1235 aa7.33□□□□□ -1.24
LRIF1-203ENST00000494675 VGFO15240 615 aaPredicted RBP7.31□□□□□ -1.24
LRIF1-203ENST00000494675 GPR153Q6NV75 609 aa7.31□□□□□ -1.24
LRIF1-203ENST00000494675 EFCAB3Q8N7B9 438 aa7.29□□□□□ -1.24
LRIF1-203ENST00000494675 LCE2BO14633 110 aa7.29□□□□□ -1.24
LRIF1-203ENST00000494675 SOX12O15370 315 aa7.27□□□□□ -1.25
LRIF1-203ENST00000494675 TMEM92Q6UXU6 159 aa7.27□□□□□ -1.25
LRIF1-203ENST00000494675 MICALL2Q8IY33 904 aa7.27□□□□□ -1.25
LRIF1-203ENST00000494675 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.26□□□□□ -1.25
LRIF1-203ENST00000494675 ZFP91Q96JP5 570 aaPredicted RBP7.26□□□□□ -1.25
LRIF1-203ENST00000494675 TRAF7Q6Q0C0 670 aa7.25□□□□□ -1.25
LRIF1-203ENST00000494675 PBX2P40425 430 aa7.25□□□□□ -1.25
LRIF1-203ENST00000494675 ARSIQ5FYB1 569 aa7.25□□□□□ -1.25
LRIF1-203ENST00000494675 ZNF316A6NFI3 1004 aaPredicted RBP7.23□□□□□ -1.25
LRIF1-203ENST00000494675 ECM2O94769 699 aaPredicted RBP7.23□□□□□ -1.25
LRIF1-203ENST00000494675 LAPTM4AQ15012 233 aa7.22□□□□□ -1.25
LRIF1-203ENST00000494675 RNF25Q96BH1 459 aaPredicted RBP7.21□□□□□ -1.25
LRIF1-203ENST00000494675 ZNF775Q96BV0 537 aaPredicted RBP7.21□□□□□ -1.25
LRIF1-203ENST00000494675 NLRP6P59044 892 aa7.2□□□□□ -1.26
LRIF1-203ENST00000494675 PKD2Q13563 968 aa7.19□□□□□ -1.26
LRIF1-203ENST00000494675 PHF8Q9UPP1 1060 aa7.19□□□□□ -1.26
LRIF1-203ENST00000494675 STK24Q9Y6E0 443 aa7.19□□□□□ -1.26
LRIF1-203ENST00000494675 BCL11BQ9C0K0 894 aaPredicted RBP7.19□□□□□ -1.26
LRIF1-203ENST00000494675 KHSRPQ92945 711 aaKnown RBP eCLIP7.18□□□□□ -1.263e-8■■□□□ 13.4
LRIF1-203ENST00000494675 STK25O00506 426 aa7.16□□□□□ -1.26
LRIF1-203ENST00000494675 MS4A4AQ96JQ5 239 aa7.16□□□□□ -1.26
LRIF1-203ENST00000494675 ZNF787Q6DD87 383 aa7.15□□□□□ -1.26
LRIF1-203ENST00000494675 POTEEQ6S8J3 1075 aa7.15□□□□□ -1.27
LRIF1-203ENST00000494675 ADGRD1Q6QNK2 874 aa7.14□□□□□ -1.27
LRIF1-203ENST00000494675 RGL2O15211 777 aa7.11□□□□□ -1.27
LRIF1-203ENST00000494675 KCTD12Q96CX2 325 aaKnown RBP7.11□□□□□ -1.27
LRIF1-203ENST00000494675 AXIN2Q9Y2T1 843 aa7.11□□□□□ -1.27
LRIF1-203ENST00000494675 NUDT7P0C024 238 aa7.1□□□□□ -1.27
LRIF1-203ENST00000494675 FBXO22Q8NEZ5 403 aa7.1□□□□□ -1.27
LRIF1-203ENST00000494675 LHX6Q9UPM6 363 aa7.09□□□□□ -1.27
LRIF1-203ENST00000494675 MFRPQ9BY79 579 aa7.07□□□□□ -1.28
LRIF1-203ENST00000494675 PCDHGA4Q9Y5G9 962 aa7.07□□□□□ -1.28
LRIF1-203ENST00000494675 ARHGAP33O14559 1287 aa7.06□□□□□ -1.28
LRIF1-203ENST00000494675 HRO43593 1189 aa7.06□□□□□ -1.28
LRIF1-203ENST00000494675 KIF3CO14782 793 aa7.05□□□□□ -1.28
LRIF1-203ENST00000494675 SLC34A2O95436 690 aa7.05□□□□□ -1.28
LRIF1-203ENST00000494675 C2orf72A6NCS6 295 aa7.04□□□□□ -1.28
LRIF1-203ENST00000494675 TK2O00142 265 aa7.04□□□□□ -1.28
LRIF1-203ENST00000494675 DCAF8L2P0C7V8 631 aa7.03□□□□□ -1.28
LRIF1-203ENST00000494675 PSDA5PKW4 1024 aaPredicted RBP7.03□□□□□ -1.28
LRIF1-203ENST00000494675 GFRA3O60609 400 aa7.03□□□□□ -1.28
LRIF1-203ENST00000494675 TMC2Q8TDI7 906 aa7.03□□□□□ -1.28
LRIF1-203ENST00000494675 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
LRIF1-203ENST00000494675 STAC3Q96MF2 364 aa7.01□□□□□ -1.29
LRIF1-203ENST00000494675 PTPN5P54829 565 aa7□□□□□ -1.29
LRIF1-203ENST00000494675 HS6ST3Q8IZP7 471 aa6.99□□□□□ -1.29
LRIF1-203ENST00000494675 STK17AQ9UEE5 414 aa6.99□□□□□ -1.29
LRIF1-203ENST00000494675 SLC24A1O60721 1099 aa6.98□□□□□ -1.29
LRIF1-203ENST00000494675 CHGAP10645 457 aaKnown RBP6.97□□□□□ -1.29
LRIF1-203ENST00000494675 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
LRIF1-203ENST00000494675 PSEN2P49810 448 aa6.96□□□□□ -1.3
LRIF1-203ENST00000494675 NRG2O14511 850 aaPredicted RBP6.95□□□□□ -1.3
LRIF1-203ENST00000494675 PPP1R37O75864 691 aa6.95□□□□□ -1.3
LRIF1-203ENST00000494675 SUZ12Q15022 739 aaKnown RBP6.95□□□□□ -1.3
LRIF1-203ENST00000494675 RYDENQ9NUL5 291 aaKnown RBP6.95□□□□□ -1.3
LRIF1-203ENST00000494675 KDM4FA0A1W2PPD8 638 aa6.93□□□□□ -1.3
LRIF1-203ENST00000494675 PPP4R3BQ5MIZ7 849 aa6.93□□□□□ -1.3
LRIF1-203ENST00000494675 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
LRIF1-203ENST00000494675 PTCD2Q8WV60 388 aaKnown RBP6.91□□□□□ -1.3
LRIF1-203ENST00000494675 DNAJC5Q9H3Z4 198 aa6.91□□□□□ -1.3
LRIF1-203ENST00000494675 TBC1D12O60347 775 aa6.91□□□□□ -1.3
LRIF1-203ENST00000494675 TREML4Q6UXN2 200 aa6.91□□□□□ -1.3
LRIF1-203ENST00000494675 KCNH8Q96L42 1107 aa6.9□□□□□ -1.3
LRIF1-203ENST00000494675 PLPP6Q8IY26 295 aa6.89□□□□□ -1.31
LRIF1-203ENST00000494675 GPHNQ9NQX3 736 aaPredicted RBP6.88□□□□□ -1.31
LRIF1-203ENST00000494675 VPS9D1Q9Y2B5 631 aa6.88□□□□□ -1.31
LRIF1-203ENST00000494675 FOXK1P85037 733 aa6.87□□□□□ -1.31
LRIF1-203ENST00000494675 KCNK17Q96T54 332 aa6.87□□□□□ -1.31
LRIF1-203ENST00000494675 ITGBL1O95965 494 aaPredicted RBP6.86□□□□□ -1.31
LRIF1-203ENST00000494675 THSD4Q6ZMP0 1018 aa6.86□□□□□ -1.31
LRIF1-203ENST00000494675 PLCB2Q00722 1185 aa6.84□□□□□ -1.31
LRIF1-203ENST00000494675 NKX1-1Q15270 411 aaPredicted RBP6.84□□□□□ -1.31
LRIF1-203ENST00000494675 DSG2Q14126 1118 aa6.84□□□□□ -1.32
LRIF1-203ENST00000494675 SLC4A5Q9BY07 1137 aa6.84□□□□□ -1.32
LRIF1-203ENST00000494675 GOLGA8CPA6NN73 597 aa6.83□□□□□ -1.32
LRIF1-203ENST00000494675 PDE4AP27815 886 aa6.83□□□□□ -1.32
LRIF1-203ENST00000494675 BBXQ8WY36 941 aaPredicted RBP6.83□□□□□ -1.32
LRIF1-203ENST00000494675 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
LRIF1-203ENST00000494675 BHMG1C9JSJ3 638 aaPredicted RBP6.8□□□□□ -1.32
LRIF1-203ENST00000494675 WNT2BQ93097 391 aa6.8□□□□□ -1.32
LRIF1-203ENST00000494675 GTPBP6O43824 516 aaPredicted RBP6.8□□□□□ -1.32
LRIF1-203ENST00000494675 PPP1R15BQ5SWA1 713 aa6.79□□□□□ -1.32
LRIF1-203ENST00000494675 MRPL50Q8N5N7 158 aaKnown RBP6.78□□□□□ -1.32
LRIF1-203ENST00000494675 UPF1Q92900 1129 aaKnown RBP eCLIP6.78□□□□□ -1.32
LRIF1-203ENST00000494675 CRISPLD2Q9H0B8 497 aa6.78□□□□□ -1.32
LRIF1-203ENST00000494675 BCL2L12Q9HB09 334 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms