RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 TTC37Q6PGP7 1564 aa10.21□□□□□ -0.77
EPHA3-203ENST00000494014 FMN1Q68DA7 1419 aa10.21□□□□□ -0.78
EPHA3-203ENST00000494014 KDM5CP41229 1560 aa10.2□□□□□ -0.78
EPHA3-203ENST00000494014 DENND4BO75064 1496 aaPredicted RBP10.18□□□□□ -0.78
EPHA3-203ENST00000494014 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
EPHA3-203ENST00000494014 PLCH2O75038 1416 aa10.17□□□□□ -0.78
EPHA3-203ENST00000494014 KIF14Q15058 1648 aa10.17□□□□□ -0.78
EPHA3-203ENST00000494014 ZFYVE16Q7Z3T8 1539 aa10.17□□□□□ -0.78
EPHA3-203ENST00000494014 AKNAQ7Z591 1439 aa10.17□□□□□ -0.78
EPHA3-203ENST00000494014 EHMT2Q96KQ7 1210 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 FANCAO15360 1455 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 CCDC18Q5T9S5 1454 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 PTPRMP28827 1452 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 ARHGEF12Q9NZN5 1544 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 PREX2Q70Z35 1606 aa10.16□□□□□ -0.78
EPHA3-203ENST00000494014 POGZQ7Z3K3 1410 aa10.15□□□□□ -0.78
EPHA3-203ENST00000494014 MADDQ8WXG6 1647 aa10.15□□□□□ -0.78
EPHA3-203ENST00000494014 AGLP35573 1532 aa10.14□□□□□ -0.79
EPHA3-203ENST00000494014 SIGLEC1Q9BZZ2 1709 aa10.14□□□□□ -0.79
EPHA3-203ENST00000494014 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
EPHA3-203ENST00000494014 ITSN2Q9NZM3 1697 aa10.13□□□□□ -0.79
EPHA3-203ENST00000494014 TROQ12816 1431 aaPredicted RBP10.12□□□□□ -0.79
EPHA3-203ENST00000494014 FER1L4A9Z1Z3 1794 aa10.12□□□□□ -0.79
EPHA3-203ENST00000494014 CASKIN1Q8WXD9 1431 aa10.12□□□□□ -0.79
EPHA3-203ENST00000494014 CDC42BPBQ9Y5S2 1711 aa10.12□□□□□ -0.79
EPHA3-203ENST00000494014 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
EPHA3-203ENST00000494014 MROH2AA6NES4 1674 aa10.11□□□□□ -0.79
EPHA3-203ENST00000494014 APLP2Q06481 763 aa10.11□□□□□ -0.79
EPHA3-203ENST00000494014 RIMS1Q86UR5 1692 aaKnown RBP10.11□□□□□ -0.79
EPHA3-203ENST00000494014 CEP162Q5TB80 1403 aa10.11□□□□□ -0.79
EPHA3-203ENST00000494014 MLH3Q9UHC1 1453 aa10.1□□□□□ -0.79
EPHA3-203ENST00000494014 PREX1Q8TCU6 1659 aa10.1□□□□□ -0.79
EPHA3-203ENST00000494014 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
EPHA3-203ENST00000494014 CDK13Q14004 1512 aaKnown RBP10.1□□□□□ -0.79
EPHA3-203ENST00000494014 ZNF518AQ6AHZ1 1483 aa10.1□□□□□ -0.79
EPHA3-203ENST00000494014 ABCC1P33527 1531 aa10.1□□□□□ -0.79
EPHA3-203ENST00000494014 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
EPHA3-203ENST00000494014 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
EPHA3-203ENST00000494014 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
EPHA3-203ENST00000494014 ATP10AO60312 1499 aa10.09□□□□□ -0.79
EPHA3-203ENST00000494014 FAM135AQ9P2D6 1515 aa10.08□□□□□ -0.8
EPHA3-203ENST00000494014 CLIP1P30622 1438 aa10.08□□□□□ -0.8
EPHA3-203ENST00000494014 DIP2CQ9Y2E4 1556 aa10.08□□□□□ -0.8
EPHA3-203ENST00000494014 CDC42BPAQ5VT25 1732 aa10.08□□□□□ -0.8
EPHA3-203ENST00000494014 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
EPHA3-203ENST00000494014 KCNH8Q96L42 1107 aa10.06□□□□□ -0.8
EPHA3-203ENST00000494014 ABCA6Q8N139 1617 aa10.05□□□□□ -0.8
EPHA3-203ENST00000494014 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
EPHA3-203ENST00000494014 FANCIQ9NVI1 1328 aa10.03□□□□□ -0.8
EPHA3-203ENST00000494014 CDK11AQ9UQ88 783 aaPredicted RBP10.03□□□□□ -0.8
EPHA3-203ENST00000494014 KIDINS220Q9ULH0 1771 aa10.03□□□□□ -0.8
EPHA3-203ENST00000494014 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
EPHA3-203ENST00000494014 PLEKHH2Q8IVE3 1493 aa10.03□□□□□ -0.8
EPHA3-203ENST00000494014 KIAA1107Q9UPP5 1409 aa10.03□□□□□ -0.8
EPHA3-203ENST00000494014 SCAPERQ9BY12 1400 aa10.02□□□□□ -0.8
EPHA3-203ENST00000494014 ZNF142P52746 1687 aaPredicted RBP10.02□□□□□ -0.81
EPHA3-203ENST00000494014 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
EPHA3-203ENST00000494014 NEFLP07196 543 aa10.01□□□□□ -0.81
EPHA3-203ENST00000494014 IQSEC2Q5JU85 1478 aa10.01□□□□□ -0.81
EPHA3-203ENST00000494014 ARHGAP5Q13017 1502 aa10.01□□□□□ -0.81
EPHA3-203ENST00000494014 CNTLNQ9NXG0 1405 aa10.01□□□□□ -0.81
EPHA3-203ENST00000494014 ADGBQ8N7X0 1667 aa10.01□□□□□ -0.81
EPHA3-203ENST00000494014 FKBP8Q14318 412 aa10□□□□□ -0.81
EPHA3-203ENST00000494014 EFCAB2Q5VUJ9 269 aa10□□□□□ -0.81
EPHA3-203ENST00000494014 SAMD9LQ8IVG5 1584 aa10□□□□□ -0.81
EPHA3-203ENST00000494014 C3P01024 1663 aa10□□□□□ -0.81
EPHA3-203ENST00000494014 SETD1BQ9UPS6 1966 aaKnown RBP10□□□□□ -0.81
EPHA3-203ENST00000494014 RAPGEF3O95398 923 aa10□□□□□ -0.81
EPHA3-203ENST00000494014 P3H3Q8IVL6 736 aa10□□□□□ -0.81
EPHA3-203ENST00000494014 NPATQ14207 1427 aa9.99□□□□□ -0.81
EPHA3-203ENST00000494014 EHBP1L1Q8N3D4 1523 aa9.98□□□□□ -0.81
EPHA3-203ENST00000494014 MSH5O43196 834 aa9.98□□□□□ -0.81
EPHA3-203ENST00000494014 BCANQ96GW7 911 aa9.98□□□□□ -0.81
EPHA3-203ENST00000494014 STRCQ7RTU9 1775 aa9.97□□□□□ -0.81
EPHA3-203ENST00000494014 ERICH6BQ5W0A0 696 aa9.97□□□□□ -0.81
EPHA3-203ENST00000494014 MAP3K1Q13233 1512 aa9.96□□□□□ -0.82
EPHA3-203ENST00000494014 HNRNPUL2Q1KMD3 747 aaKnown RBP9.96□□□□□ -0.82
EPHA3-203ENST00000494014 PTPRTO14522 1441 aa9.96□□□□□ -0.82
EPHA3-203ENST00000494014 GPATCH8Q9UKJ3 1502 aaKnown RBP9.96□□□□□ -0.82
EPHA3-203ENST00000494014 RTEL1-TNFRSF6BF6WH68 1400 aa9.95□□□□□ -0.82
EPHA3-203ENST00000494014 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
EPHA3-203ENST00000494014 TIAM1Q13009 1591 aa9.94□□□□□ -0.82
EPHA3-203ENST00000494014 FBXO41Q8TF61 875 aa9.94□□□□□ -0.82
EPHA3-203ENST00000494014 ARHGEF5Q12774 1597 aa9.94□□□□□ -0.82
EPHA3-203ENST00000494014 MAST1Q9Y2H9 1570 aa9.94□□□□□ -0.82
EPHA3-203ENST00000494014 ILDR1Q86SU0 546 aaPredicted RBP9.93□□□□□ -0.82
EPHA3-203ENST00000494014 DEKP35659 375 aaKnown RBP9.93□□□□□ -0.82
EPHA3-203ENST00000494014 PPP6R1Q9UPN7 881 aa9.93□□□□□ -0.82
EPHA3-203ENST00000494014 PLA2R1Q13018 1463 aa9.92□□□□□ -0.82
EPHA3-203ENST00000494014 TRAPPC8Q9Y2L5 1435 aa9.92□□□□□ -0.82
EPHA3-203ENST00000494014 DHX57Q6P158 1386 aaKnown RBP9.91□□□□□ -0.82
EPHA3-203ENST00000494014 SYCP2Q9BX26 1530 aa9.91□□□□□ -0.82
EPHA3-203ENST00000494014 ZC3H13Q5T200 1668 aaKnown RBP9.9□□□□□ -0.82
EPHA3-203ENST00000494014 EIF2AK4Q9P2K8 1649 aaKnown RBP9.9□□□□□ -0.82
EPHA3-203ENST00000494014 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.82
EPHA3-203ENST00000494014 MYO3AQ8NEV4 1616 aa9.9□□□□□ -0.83
EPHA3-203ENST00000494014 UHRF1BP1Q6BDS2 1440 aa9.89□□□□□ -0.83
EPHA3-203ENST00000494014 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms