RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 ILDR2Q71H61 639 aa9.83□□□□□ -0.84
A1CF-210ENST00000493415 ZMYM4Q5VZL5 1548 aa9.82□□□□□ -0.84
A1CF-210ENST00000493415 SOCS7O14512 581 aa9.82□□□□□ -0.84
A1CF-210ENST00000493415 PRXQ9BXM0 1461 aa9.82□□□□□ -0.84
A1CF-210ENST00000493415 HECW1Q76N89 1606 aa9.81□□□□□ -0.84
A1CF-210ENST00000493415 YEATS2Q9ULM3 1422 aa9.81□□□□□ -0.84
A1CF-210ENST00000493415 NUP153P49790 1475 aaKnown RBP9.8□□□□□ -0.84
A1CF-210ENST00000493415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.8□□□□□ -0.84
A1CF-210ENST00000493415 FHOD3Q2V2M9 1422 aa9.8□□□□□ -0.84
A1CF-210ENST00000493415 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
A1CF-210ENST00000493415 PLEKHD1A6NEE1 506 aa9.78□□□□□ -0.84
A1CF-210ENST00000493415 MYO5CQ9NQX4 1742 aa9.77□□□□□ -0.85
A1CF-210ENST00000493415 MAGI2Q86UL8 1455 aa9.77□□□□□ -0.85
A1CF-210ENST00000493415 C9orf84Q5VXU9 1444 aa9.76□□□□□ -0.85
A1CF-210ENST00000493415 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
A1CF-210ENST00000493415 MYT1LQ9UL68 1186 aa9.76□□□□□ -0.85
A1CF-210ENST00000493415 ARHGEF12Q9NZN5 1544 aa9.76□□□□□ -0.85
A1CF-210ENST00000493415 DMRT2Q9Y5R5 561 aa9.75□□□□□ -0.85
A1CF-210ENST00000493415 CEBPAP49715 358 aaPredicted RBP9.74□□□□□ -0.85
A1CF-210ENST00000493415 SCAPERQ9BY12 1400 aa9.73□□□□□ -0.85
A1CF-210ENST00000493415 ATP10AO60312 1499 aa9.73□□□□□ -0.85
A1CF-210ENST00000493415 CDK13Q14004 1512 aaKnown RBP9.73□□□□□ -0.85
A1CF-210ENST00000493415 SETD1BQ9UPS6 1966 aaKnown RBP9.73□□□□□ -0.85
A1CF-210ENST00000493415 C3P01024 1663 aa9.73□□□□□ -0.85
A1CF-210ENST00000493415 ESF1Q9H501 851 aaKnown RBP9.7□□□□□ -0.86
A1CF-210ENST00000493415 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
A1CF-210ENST00000493415 KIF14Q15058 1648 aa9.7□□□□□ -0.86
A1CF-210ENST00000493415 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
A1CF-210ENST00000493415 ARHGAP5Q13017 1502 aa9.69□□□□□ -0.86
A1CF-210ENST00000493415 DIP2CQ9Y2E4 1556 aa9.68□□□□□ -0.86
A1CF-210ENST00000493415 ZNF518AQ6AHZ1 1483 aa9.68□□□□□ -0.86
A1CF-210ENST00000493415 PTPRTO14522 1441 aa9.68□□□□□ -0.86
A1CF-210ENST00000493415 PLCH2O75038 1416 aa9.68□□□□□ -0.86
A1CF-210ENST00000493415 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
A1CF-210ENST00000493415 CSRNP3Q8WYN3 585 aa9.67□□□□□ -0.86
A1CF-210ENST00000493415 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
A1CF-210ENST00000493415 EFCAB2Q5VUJ9 269 aa9.66□□□□□ -0.86
A1CF-210ENST00000493415 LTBP4Q8N2S1 1624 aa9.66□□□□□ -0.86
A1CF-210ENST00000493415 KDM5CP41229 1560 aa9.66□□□□□ -0.86
A1CF-210ENST00000493415 CAMSAP1Q5T5Y3 1602 aa9.64□□□□□ -0.87
A1CF-210ENST00000493415 ITSN2Q9NZM3 1697 aa9.64□□□□□ -0.87
A1CF-210ENST00000493415 NCOA1Q15788 1441 aa9.64□□□□□ -0.87
A1CF-210ENST00000493415 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
A1CF-210ENST00000493415 UBAP1LF5GYI3 381 aa9.63□□□□□ -0.87
A1CF-210ENST00000493415 CLIP1P30622 1438 aa9.63□□□□□ -0.87
A1CF-210ENST00000493415 CDC42BPBQ9Y5S2 1711 aa9.62□□□□□ -0.87
A1CF-210ENST00000493415 SCAF1Q9H7N4 1312 aaKnown RBP9.62□□□□□ -0.87
A1CF-210ENST00000493415 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
A1CF-210ENST00000493415 EHMT2Q96KQ7 1210 aa9.62□□□□□ -0.87
A1CF-210ENST00000493415 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
A1CF-210ENST00000493415 PREX2Q70Z35 1606 aa9.61□□□□□ -0.87
A1CF-210ENST00000493415 CDK11AQ9UQ88 783 aaPredicted RBP9.61□□□□□ -0.87
A1CF-210ENST00000493415 EEA1Q15075 1411 aa9.61□□□□□ -0.87
A1CF-210ENST00000493415 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
A1CF-210ENST00000493415 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
A1CF-210ENST00000493415 LRRIQ1Q96JM4 1722 aa9.6□□□□□ -0.87
A1CF-210ENST00000493415 CNTLNQ9NXG0 1405 aa9.6□□□□□ -0.87
A1CF-210ENST00000493415 CLTCQ00610 1675 aaKnown RBP9.6□□□□□ -0.87
A1CF-210ENST00000493415 ABCC1P33527 1531 aa9.6□□□□□ -0.87
A1CF-210ENST00000493415 AGLP35573 1532 aa9.6□□□□□ -0.87
A1CF-210ENST00000493415 MED1Q15648 1581 aaPredicted RBP9.59□□□□□ -0.87
A1CF-210ENST00000493415 TROQ12816 1431 aaPredicted RBP9.59□□□□□ -0.87
A1CF-210ENST00000493415 FMN1Q68DA7 1419 aa9.59□□□□□ -0.87
A1CF-210ENST00000493415 ZNF142P52746 1687 aaPredicted RBP9.59□□□□□ -0.87
A1CF-210ENST00000493415 KIDINS220Q9ULH0 1771 aa9.59□□□□□ -0.87
A1CF-210ENST00000493415 ZNF335Q9H4Z2 1342 aaPredicted RBP9.58□□□□□ -0.88
A1CF-210ENST00000493415 MSH5O43196 834 aa9.58□□□□□ -0.88
A1CF-210ENST00000493415 MLH3Q9UHC1 1453 aa9.58□□□□□ -0.88
A1CF-210ENST00000493415 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
A1CF-210ENST00000493415 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
A1CF-210ENST00000493415 CEP170BQ9Y4F5 1589 aaPredicted RBP9.56□□□□□ -0.88
A1CF-210ENST00000493415 NPATQ14207 1427 aa9.56□□□□□ -0.88
A1CF-210ENST00000493415 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
A1CF-210ENST00000493415 PIP4K2BP78356 416 aa9.55□□□□□ -0.88
A1CF-210ENST00000493415 POLR1AO95602 1720 aaPredicted RBP9.55□□□□□ -0.88
A1CF-210ENST00000493415 ARHGAP35Q9NRY4 1499 aa9.53□□□□□ -0.88
A1CF-210ENST00000493415 SYCP2Q9BX26 1530 aa9.53□□□□□ -0.88
A1CF-210ENST00000493415 SAMD9LQ8IVG5 1584 aa9.53□□□□□ -0.88
A1CF-210ENST00000493415 PLA2R1Q13018 1463 aa9.53□□□□□ -0.88
A1CF-210ENST00000493415 ZMYM3Q14202 1370 aa9.52□□□□□ -0.88
A1CF-210ENST00000493415 PKD2Q13563 968 aa9.52□□□□□ -0.89
A1CF-210ENST00000493415 ZNF777Q9ULD5 760 aaPredicted RBP9.52□□□□□ -0.89
A1CF-210ENST00000493415 HSPA1LP34931 641 aa9.51□□□□□ -0.89
A1CF-210ENST00000493415 CCDC18Q5T9S5 1454 aa9.51□□□□□ -0.89
A1CF-210ENST00000493415 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
A1CF-210ENST00000493415 TCOF1Q13428 1488 aaKnown RBP9.5□□□□□ -0.89
A1CF-210ENST00000493415 TOM1O60784 492 aa9.49□□□□□ -0.89
A1CF-210ENST00000493415 CPS1P31327 1500 aa9.49□□□□□ -0.89
A1CF-210ENST00000493415 SPAG9O60271 1321 aaKnown RBP9.49□□□□□ -0.89
A1CF-210ENST00000493415 INO80Q9ULG1 1556 aaPredicted RBP9.49□□□□□ -0.89
A1CF-210ENST00000493415 ADGBQ8N7X0 1667 aa9.48□□□□□ -0.89
A1CF-210ENST00000493415 GGT6Q6P531 493 aa9.48□□□□□ -0.89
A1CF-210ENST00000493415 PLXNC1O60486 1568 aa9.48□□□□□ -0.89
A1CF-210ENST00000493415 DNMT1P26358 1616 aaKnown RBP9.48□□□□□ -0.89
A1CF-210ENST00000493415 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
A1CF-210ENST00000493415 A2MP01023 1474 aa9.47□□□□□ -0.89
A1CF-210ENST00000493415 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
A1CF-210ENST00000493415 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.9
A1CF-210ENST00000493415 HNRNPMP52272 730 aaKnown RBP eCLIP9.45□□□□□ -0.9
A1CF-210ENST00000493415 SHANK2Q9UPX8 1470 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms