RNA–Protein interactions for RNA: ENST00000492882.1

USP34-220, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 348 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-220ENST00000492882 SOX12O15370 315 aa11.03□□□□□ -0.64
USP34-220ENST00000492882 KHSRPQ92945 711 aaKnown RBP eCLIP11.02□□□□□ -0.65
USP34-220ENST00000492882 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.65
USP34-220ENST00000492882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
USP34-220ENST00000492882 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
USP34-220ENST00000492882 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
USP34-220ENST00000492882 PTGER2P43116 358 aa10.97□□□□□ -0.65
USP34-220ENST00000492882 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
USP34-220ENST00000492882 RNF25Q96BH1 459 aaPredicted RBP10.95□□□□□ -0.66
USP34-220ENST00000492882 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
USP34-220ENST00000492882 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP34-220ENST00000492882 NLRP6P59044 892 aa10.89□□□□□ -0.67
USP34-220ENST00000492882 NUDT7P0C024 238 aa10.88□□□□□ -0.67
USP34-220ENST00000492882 AXIN2Q9Y2T1 843 aa10.87□□□□□ -0.67
USP34-220ENST00000492882 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
USP34-220ENST00000492882 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
USP34-220ENST00000492882 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
USP34-220ENST00000492882 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
USP34-220ENST00000492882 FBXO22Q8NEZ5 403 aa10.82□□□□□ -0.68
USP34-220ENST00000492882 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
USP34-220ENST00000492882 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
USP34-220ENST00000492882 PBX2P40425 430 aa10.79□□□□□ -0.68
USP34-220ENST00000492882 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
USP34-220ENST00000492882 MFRPQ9BY79 579 aa10.77□□□□□ -0.69
USP34-220ENST00000492882 KIF3CO14782 793 aa10.76□□□□□ -0.69
USP34-220ENST00000492882 HCSTQ9UBK5 93 aa10.76□□□□□ -0.69
USP34-220ENST00000492882 STK25O00506 426 aa10.74□□□□□ -0.69
USP34-220ENST00000492882 TAOK2Q9UL54 1235 aa10.74□□□□□ -0.69
USP34-220ENST00000492882 TMC2Q8TDI7 906 aa10.73□□□□□ -0.69
USP34-220ENST00000492882 ADGRD1Q6QNK2 874 aa10.72□□□□□ -0.69
USP34-220ENST00000492882 ARHGAP33O14559 1287 aa10.69□□□□□ -0.7
USP34-220ENST00000492882 SLC34A2O95436 690 aa10.68□□□□□ -0.7
USP34-220ENST00000492882 PSEN2P49810 448 aa10.65□□□□□ -0.7
USP34-220ENST00000492882 DMRTA1Q5VZB9 504 aa10.64□□□□□ -0.71
USP34-220ENST00000492882 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
USP34-220ENST00000492882 STAC3Q96MF2 364 aa10.63□□□□□ -0.71
USP34-220ENST00000492882 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
USP34-220ENST00000492882 PSDA5PKW4 1024 aaPredicted RBP10.61□□□□□ -0.71
USP34-220ENST00000492882 PPP1R37O75864 691 aa10.59□□□□□ -0.71
USP34-220ENST00000492882 TK2O00142 265 aa10.57□□□□□ -0.72
USP34-220ENST00000492882 HRO43593 1189 aa10.57□□□□□ -0.72
USP34-220ENST00000492882 PTPN5P54829 565 aa10.55□□□□□ -0.72
USP34-220ENST00000492882 PPP4R3BQ5MIZ7 849 aa10.55□□□□□ -0.72
USP34-220ENST00000492882 PLPP6Q8IY26 295 aa10.53□□□□□ -0.72
USP34-220ENST00000492882 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
USP34-220ENST00000492882 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
USP34-220ENST00000492882 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.73
USP34-220ENST00000492882 RGL2O15211 777 aa10.52□□□□□ -0.73
USP34-220ENST00000492882 KCNH8Q96L42 1107 aa10.51□□□□□ -0.73
USP34-220ENST00000492882 TBC1D12O60347 775 aa10.49□□□□□ -0.73
USP34-220ENST00000492882 FOXK1P85037 733 aa10.47□□□□□ -0.73
USP34-220ENST00000492882 DSG2Q14126 1118 aa10.45□□□□□ -0.74
USP34-220ENST00000492882 VPS9D1Q9Y2B5 631 aa10.44□□□□□ -0.74
USP34-220ENST00000492882 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
USP34-220ENST00000492882 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
USP34-220ENST00000492882 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
USP34-220ENST00000492882 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
USP34-220ENST00000492882 PKD2Q13563 968 aa10.41□□□□□ -0.74
USP34-220ENST00000492882 GOLGA8CPA6NN73 597 aa10.4□□□□□ -0.74
USP34-220ENST00000492882 THSD4Q6ZMP0 1018 aa10.36□□□□□ -0.75
USP34-220ENST00000492882 WNT2BQ93097 391 aa10.36□□□□□ -0.75
USP34-220ENST00000492882 RGS20O76081 388 aa10.33□□□□□ -0.76
USP34-220ENST00000492882 PTPREP23469 700 aa10.33□□□□□ -0.76
USP34-220ENST00000492882 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
USP34-220ENST00000492882 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
USP34-220ENST00000492882 A0A0G2JS52 829 aa10.32□□□□□ -0.76
USP34-220ENST00000492882 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
USP34-220ENST00000492882 BHMG1C9JSJ3 638 aaPredicted RBP10.3□□□□□ -0.76
USP34-220ENST00000492882 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
USP34-220ENST00000492882 SLC4A5Q9BY07 1137 aa10.29□□□□□ -0.76
USP34-220ENST00000492882 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
USP34-220ENST00000492882 FOSBP53539 338 aa10.27□□□□□ -0.77
USP34-220ENST00000492882 PPP1R15BQ5SWA1 713 aa10.25□□□□□ -0.77
USP34-220ENST00000492882 HS6ST3Q8IZP7 471 aa10.24□□□□□ -0.77
USP34-220ENST00000492882 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
USP34-220ENST00000492882 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
USP34-220ENST00000492882 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
USP34-220ENST00000492882 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
USP34-220ENST00000492882 EVI5O60447 810 aa10.21□□□□□ -0.77
USP34-220ENST00000492882 Q6ZNB5 142 aa10.21□□□□□ -0.77
USP34-220ENST00000492882 JPH4Q96JJ6 628 aa10.2□□□□□ -0.78
USP34-220ENST00000492882 CRISPLD2Q9H0B8 497 aa10.19□□□□□ -0.78
USP34-220ENST00000492882 ANKK1Q8NFD2 765 aa10.18□□□□□ -0.78
USP34-220ENST00000492882 BCAMP50895 628 aa10.17□□□□□ -0.78
USP34-220ENST00000492882 PROX2Q3B8N5 592 aa10.16□□□□□ -0.78
USP34-220ENST00000492882 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
USP34-220ENST00000492882 PDE4AP27815 886 aa10.15□□□□□ -0.78
USP34-220ENST00000492882 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
USP34-220ENST00000492882 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
USP34-220ENST00000492882 NCKAP5LQ9HCH0 1330 aa10.14□□□□□ -0.79
USP34-220ENST00000492882 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
USP34-220ENST00000492882 ITGBL1O95965 494 aaPredicted RBP10.12□□□□□ -0.79
USP34-220ENST00000492882 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
USP34-220ENST00000492882 COL9A1P20849 921 aa10.11□□□□□ -0.79
USP34-220ENST00000492882 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
USP34-220ENST00000492882 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
USP34-220ENST00000492882 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
USP34-220ENST00000492882 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
USP34-220ENST00000492882 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
USP34-220ENST00000492882 WBP1LQ9NX94 342 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms