RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 FER1L4A9Z1Z3 1794 aa28.16■■■□□ 2.1
PSMD4-212ENST00000491857 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
PSMD4-212ENST00000491857 PLPPR3Q6T4P5 718 aa28.11■■■□□ 2.09
PSMD4-212ENST00000491857 ATP1B4Q9UN42 357 aaPredicted RBP28.11■■■□□ 2.09
PSMD4-212ENST00000491857 CDK11AQ9UQ88 783 aaPredicted RBP28.11■■■□□ 2.09
PSMD4-212ENST00000491857 EFCAB2Q5VUJ9 269 aa28.09■■■□□ 2.09
PSMD4-212ENST00000491857 MLECQ14165 292 aa28.08■■■□□ 2.09
PSMD4-212ENST00000491857 ATP10AO60312 1499 aa28.08■■■□□ 2.09
PSMD4-212ENST00000491857 KIF14Q15058 1648 aa28.07■■■□□ 2.08
PSMD4-212ENST00000491857 HSPA2P54652 639 aa28.07■■■□□ 2.08
PSMD4-212ENST00000491857 C9orf84Q5VXU9 1444 aa28.07■■■□□ 2.08
PSMD4-212ENST00000491857 ARHGAP35Q9NRY4 1499 aa28.07■■■□□ 2.08
PSMD4-212ENST00000491857 ARHGEF12Q9NZN5 1544 aa28.03■■■□□ 2.08
PSMD4-212ENST00000491857 ZNF518AQ6AHZ1 1483 aa28.02■■■□□ 2.08
PSMD4-212ENST00000491857 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
PSMD4-212ENST00000491857 CLIP1P30622 1438 aa28.01■■■□□ 2.08
PSMD4-212ENST00000491857 TROQ12816 1431 aaPredicted RBP28.01■■■□□ 2.08
PSMD4-212ENST00000491857 ARHGAP5Q13017 1502 aa28■■■□□ 2.07
PSMD4-212ENST00000491857 PREX1Q8TCU6 1659 aa27.99■■■□□ 2.07
PSMD4-212ENST00000491857 KDM5CP41229 1560 aa27.98■■■□□ 2.07
PSMD4-212ENST00000491857 LRRIQ1Q96JM4 1722 aa27.95■■■□□ 2.06
PSMD4-212ENST00000491857 CDC42BPBQ9Y5S2 1711 aa27.9■■■□□ 2.06
PSMD4-212ENST00000491857 MYT1LQ9UL68 1186 aa27.9■■■□□ 2.06
PSMD4-212ENST00000491857 AFAP1Q8N556 730 aa27.89■■■□□ 2.06
PSMD4-212ENST00000491857 REREQ9P2R6 1566 aa27.89■■■□□ 2.05
PSMD4-212ENST00000491857 DIP2CQ9Y2E4 1556 aa27.89■■■□□ 2.05
PSMD4-212ENST00000491857 CERKQ8TCT0 537 aa27.87■■■□□ 2.05
PSMD4-212ENST00000491857 PREX2Q70Z35 1606 aa27.87■■■□□ 2.05
PSMD4-212ENST00000491857 SETD1BQ9UPS6 1966 aaKnown RBP27.87■■■□□ 2.05
PSMD4-212ENST00000491857 CCDC18Q5T9S5 1454 aa27.85■■■□□ 2.05
PSMD4-212ENST00000491857 MLH3Q9UHC1 1453 aa27.84■■■□□ 2.05
PSMD4-212ENST00000491857 CEBPAP49715 358 aaPredicted RBP27.84■■■□□ 2.05
PSMD4-212ENST00000491857 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
PSMD4-212ENST00000491857 ABCA6Q8N139 1617 aa27.83■■■□□ 2.05
PSMD4-212ENST00000491857 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
PSMD4-212ENST00000491857 ABCC1P33527 1531 aa27.82■■■□□ 2.04
PSMD4-212ENST00000491857 CASKIN1Q8WXD9 1431 aa27.81■■■□□ 2.04
PSMD4-212ENST00000491857 ITSN2Q9NZM3 1697 aa27.81■■■□□ 2.04
PSMD4-212ENST00000491857 DMRT2Q9Y5R5 561 aa27.8■■■□□ 2.04
PSMD4-212ENST00000491857 AGLP35573 1532 aa27.78■■■□□ 2.04
PSMD4-212ENST00000491857 STRCQ7RTU9 1775 aa27.78■■■□□ 2.04
PSMD4-212ENST00000491857 C3P01024 1663 aa27.77■■■□□ 2.04
PSMD4-212ENST00000491857 TRAPPC8Q9Y2L5 1435 aa27.75■■■□□ 2.03
PSMD4-212ENST00000491857 CDC42BPAQ5VT25 1732 aa27.75■■■□□ 2.03
PSMD4-212ENST00000491857 ESF1Q9H501 851 aaKnown RBP27.75■■■□□ 2.03
PSMD4-212ENST00000491857 KIDINS220Q9ULH0 1771 aa27.72■■■□□ 2.03
PSMD4-212ENST00000491857 FYCO1Q9BQS8 1478 aa27.7■■■□□ 2.03
PSMD4-212ENST00000491857 CNTLNQ9NXG0 1405 aa27.68■■■□□ 2.02
PSMD4-212ENST00000491857 PTPRTO14522 1441 aa27.64■■■□□ 2.02
PSMD4-212ENST00000491857 SAMD9LQ8IVG5 1584 aa27.64■■■□□ 2.01
PSMD4-212ENST00000491857 MROH2AA6NES4 1674 aa27.62■■■□□ 2.01
PSMD4-212ENST00000491857 ZNF777Q9ULD5 760 aaPredicted RBP27.6■■■□□ 2.01
PSMD4-212ENST00000491857 SYCP2Q9BX26 1530 aa27.6■■■□□ 2.01
PSMD4-212ENST00000491857 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
PSMD4-212ENST00000491857 SPAG9O60271 1321 aaKnown RBP27.56■■■□□ 2
PSMD4-212ENST00000491857 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
PSMD4-212ENST00000491857 NPATQ14207 1427 aa27.55■■■□□ 2
PSMD4-212ENST00000491857 PLEKHH2Q8IVE3 1493 aa27.55■■■□□ 2
PSMD4-212ENST00000491857 NCOA1Q15788 1441 aa27.54■■■□□ 2
PSMD4-212ENST00000491857 ATP7AQ04656 1500 aa27.53■■■□□ 2
PSMD4-212ENST00000491857 KIAA1107Q9UPP5 1409 aa27.52■■■□□ 2
PSMD4-212ENST00000491857 INO80Q9ULG1 1556 aaPredicted RBP27.51■■□□□ 1.99
PSMD4-212ENST00000491857 HNRNPMP52272 730 aaKnown RBP eCLIP27.5■■□□□ 1.99
PSMD4-212ENST00000491857 ZMYM3Q14202 1370 aa27.49■■□□□ 1.99
PSMD4-212ENST00000491857 CFDP1Q9UEE9 299 aaPredicted RBP27.49■■□□□ 1.99
PSMD4-212ENST00000491857 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
PSMD4-212ENST00000491857 LTBP4Q8N2S1 1624 aa27.49■■□□□ 1.99
PSMD4-212ENST00000491857 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
PSMD4-212ENST00000491857 PLXNC1O60486 1568 aa27.48■■□□□ 1.99
PSMD4-212ENST00000491857 IQSEC2Q5JU85 1478 aa27.48■■□□□ 1.99
PSMD4-212ENST00000491857 CLTCQ00610 1675 aaKnown RBP27.48■■□□□ 1.99
PSMD4-212ENST00000491857 A2MP01023 1474 aa27.46■■□□□ 1.99
PSMD4-212ENST00000491857 DISP3Q9P2K9 1392 aa27.45■■□□□ 1.98
PSMD4-212ENST00000491857 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
PSMD4-212ENST00000491857 ZNF142P52746 1687 aaPredicted RBP27.43■■□□□ 1.98
PSMD4-212ENST00000491857 ADGBQ8N7X0 1667 aa27.43■■□□□ 1.98
PSMD4-212ENST00000491857 MYO3AQ8NEV4 1616 aa27.42■■□□□ 1.98
PSMD4-212ENST00000491857 CEP170BQ9Y4F5 1589 aaPredicted RBP27.37■■□□□ 1.97
PSMD4-212ENST00000491857 PLA2R1Q13018 1463 aa27.37■■□□□ 1.97
PSMD4-212ENST00000491857 TIAM1Q13009 1591 aa27.36■■□□□ 1.97
PSMD4-212ENST00000491857 GGT6Q6P531 493 aa27.36■■□□□ 1.97
PSMD4-212ENST00000491857 PPP6R1Q9UPN7 881 aa27.36■■□□□ 1.97
PSMD4-212ENST00000491857 EHBP1L1Q8N3D4 1523 aa27.36■■□□□ 1.97
PSMD4-212ENST00000491857 PTPRKQ15262 1439 aa27.35■■□□□ 1.97
PSMD4-212ENST00000491857 SPATA31D1Q6ZQQ2 1576 aa27.34■■□□□ 1.97
PSMD4-212ENST00000491857 PKD2Q13563 968 aa27.33■■□□□ 1.97
PSMD4-212ENST00000491857 NCKAP5LQ9HCH0 1330 aa27.33■■□□□ 1.97
PSMD4-212ENST00000491857 RTEL1-TNFRSF6BF6WH68 1400 aa27.3■■□□□ 1.96
PSMD4-212ENST00000491857 TCOF1Q13428 1488 aaKnown RBP27.3■■□□□ 1.96
PSMD4-212ENST00000491857 MBD5Q9P267 1494 aa27.29■■□□□ 1.96
PSMD4-212ENST00000491857 ILDR2Q71H61 639 aa27.28■■□□□ 1.96
PSMD4-212ENST00000491857 CEP162Q5TB80 1403 aa27.27■■□□□ 1.96
PSMD4-212ENST00000491857 ZNF335Q9H4Z2 1342 aaPredicted RBP27.27■■□□□ 1.96
PSMD4-212ENST00000491857 ZNF644Q9H582 1327 aaPredicted RBP27.27■■□□□ 1.96
PSMD4-212ENST00000491857 SOCS7O14512 581 aa27.24■■□□□ 1.95
PSMD4-212ENST00000491857 A2ML1A8K2U0 1454 aa27.24■■□□□ 1.95
PSMD4-212ENST00000491857 DHX29Q7Z478 1369 aaKnown RBP27.23■■□□□ 1.95
PSMD4-212ENST00000491857 FAM135AQ9P2D6 1515 aa27.21■■□□□ 1.95
PSMD4-212ENST00000491857 DNMT1P26358 1616 aaKnown RBP27.21■■□□□ 1.95
PSMD4-212ENST00000491857 CCDC141Q6ZP82 1450 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms