RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
PTPN7-214ENST00000491584 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
PTPN7-214ENST00000491584 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
PTPN7-214ENST00000491584 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
PTPN7-214ENST00000491584 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
PTPN7-214ENST00000491584 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
PTPN7-214ENST00000491584 ZFYVE16Q7Z3T8 1539 aa18.73■□□□□ 0.59
PTPN7-214ENST00000491584 PLCH2O75038 1416 aa18.73■□□□□ 0.59
PTPN7-214ENST00000491584 POGZQ7Z3K3 1410 aa18.71■□□□□ 0.59
PTPN7-214ENST00000491584 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
PTPN7-214ENST00000491584 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
PTPN7-214ENST00000491584 KIF14Q15058 1648 aa18.68■□□□□ 0.58
PTPN7-214ENST00000491584 ARID4BQ4LE39 1312 aaPredicted RBP18.67■□□□□ 0.58
PTPN7-214ENST00000491584 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
PTPN7-214ENST00000491584 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
PTPN7-214ENST00000491584 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
PTPN7-214ENST00000491584 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
PTPN7-214ENST00000491584 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
PTPN7-214ENST00000491584 KDM5CP41229 1560 aa18.62■□□□□ 0.57
PTPN7-214ENST00000491584 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
PTPN7-214ENST00000491584 ATP10AO60312 1499 aa18.58■□□□□ 0.57
PTPN7-214ENST00000491584 C9orf84Q5VXU9 1444 aa18.58■□□□□ 0.57
PTPN7-214ENST00000491584 FBXO41Q8TF61 875 aa18.58■□□□□ 0.56
PTPN7-214ENST00000491584 EFCAB2Q5VUJ9 269 aa18.57■□□□□ 0.56
PTPN7-214ENST00000491584 CDC42BPBQ9Y5S2 1711 aa18.56■□□□□ 0.56
PTPN7-214ENST00000491584 ZNF518AQ6AHZ1 1483 aa18.56■□□□□ 0.56
PTPN7-214ENST00000491584 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
PTPN7-214ENST00000491584 DIP2CQ9Y2E4 1556 aa18.55■□□□□ 0.56
PTPN7-214ENST00000491584 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
PTPN7-214ENST00000491584 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
PTPN7-214ENST00000491584 PREX2Q70Z35 1606 aa18.53■□□□□ 0.56
PTPN7-214ENST00000491584 HSPA2P54652 639 aa18.53■□□□□ 0.56
PTPN7-214ENST00000491584 CCNB3Q8WWL7 1395 aa18.52■□□□□ 0.55
PTPN7-214ENST00000491584 ABCA6Q8N139 1617 aa18.52■□□□□ 0.55
PTPN7-214ENST00000491584 ABCC1P33527 1531 aa18.51■□□□□ 0.55
PTPN7-214ENST00000491584 MLECQ14165 292 aa18.5■□□□□ 0.55
PTPN7-214ENST00000491584 AFAP1Q8N556 730 aa18.49■□□□□ 0.55
PTPN7-214ENST00000491584 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
PTPN7-214ENST00000491584 MLH3Q9UHC1 1453 aa18.49■□□□□ 0.55
PTPN7-214ENST00000491584 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
PTPN7-214ENST00000491584 ITSN2Q9NZM3 1697 aa18.48■□□□□ 0.55
PTPN7-214ENST00000491584 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
PTPN7-214ENST00000491584 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
PTPN7-214ENST00000491584 TRAPPC8Q9Y2L5 1435 aa18.47■□□□□ 0.55
PTPN7-214ENST00000491584 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
PTPN7-214ENST00000491584 EHBP1L1Q8N3D4 1523 aa18.46■□□□□ 0.55
PTPN7-214ENST00000491584 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
PTPN7-214ENST00000491584 AGLP35573 1532 aa18.45■□□□□ 0.54
PTPN7-214ENST00000491584 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
PTPN7-214ENST00000491584 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
PTPN7-214ENST00000491584 KIDINS220Q9ULH0 1771 aa18.44■□□□□ 0.54
PTPN7-214ENST00000491584 STRCQ7RTU9 1775 aa18.42■□□□□ 0.54
PTPN7-214ENST00000491584 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
PTPN7-214ENST00000491584 C3P01024 1663 aa18.41■□□□□ 0.54
PTPN7-214ENST00000491584 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
PTPN7-214ENST00000491584 NCOA2Q15596 1464 aa18.39■□□□□ 0.53
PTPN7-214ENST00000491584 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
PTPN7-214ENST00000491584 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
PTPN7-214ENST00000491584 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
PTPN7-214ENST00000491584 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
PTPN7-214ENST00000491584 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
PTPN7-214ENST00000491584 PLEKHH2Q8IVE3 1493 aa18.35■□□□□ 0.53
PTPN7-214ENST00000491584 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
PTPN7-214ENST00000491584 CERKQ8TCT0 537 aa18.34■□□□□ 0.53
PTPN7-214ENST00000491584 PLXNC1O60486 1568 aa18.32■□□□□ 0.52
PTPN7-214ENST00000491584 INO80Q9ULG1 1556 aaPredicted RBP18.32■□□□□ 0.52
PTPN7-214ENST00000491584 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
PTPN7-214ENST00000491584 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
PTPN7-214ENST00000491584 TSPY4P0CV99 314 aa18.3■□□□□ 0.52
PTPN7-214ENST00000491584 TSPY10P0CW01 314 aa18.3■□□□□ 0.52
PTPN7-214ENST00000491584 HNRNPMP52272 730 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTPN7-214ENST00000491584 MROH2AA6NES4 1674 aa18.3■□□□□ 0.52
PTPN7-214ENST00000491584 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
PTPN7-214ENST00000491584 KIAA1107Q9UPP5 1409 aa18.3■□□□□ 0.52
PTPN7-214ENST00000491584 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
PTPN7-214ENST00000491584 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
PTPN7-214ENST00000491584 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
PTPN7-214ENST00000491584 PTPRTO14522 1441 aa18.27■□□□□ 0.52
PTPN7-214ENST00000491584 ZNF644Q9H582 1327 aaPredicted RBP18.26■□□□□ 0.51
PTPN7-214ENST00000491584 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
PTPN7-214ENST00000491584 NPATQ14207 1427 aa18.24■□□□□ 0.51
PTPN7-214ENST00000491584 NCOA1Q15788 1441 aa18.24■□□□□ 0.51
PTPN7-214ENST00000491584 LTBP4Q8N2S1 1624 aa18.24■□□□□ 0.51
PTPN7-214ENST00000491584 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
PTPN7-214ENST00000491584 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
PTPN7-214ENST00000491584 A2MP01023 1474 aa18.21■□□□□ 0.51
PTPN7-214ENST00000491584 MBD5Q9P267 1494 aa18.21■□□□□ 0.51
PTPN7-214ENST00000491584 CLTCQ00610 1675 aaKnown RBP18.21■□□□□ 0.51
PTPN7-214ENST00000491584 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
PTPN7-214ENST00000491584 FGD6Q6ZV73 1430 aa18.2■□□□□ 0.5
PTPN7-214ENST00000491584 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
PTPN7-214ENST00000491584 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
PTPN7-214ENST00000491584 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
PTPN7-214ENST00000491584 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
PTPN7-214ENST00000491584 PTPRKQ15262 1439 aa18.17■□□□□ 0.5
PTPN7-214ENST00000491584 CAMSAP2Q08AD1 1489 aa18.17■□□□□ 0.5
PTPN7-214ENST00000491584 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
PTPN7-214ENST00000491584 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.5
PTPN7-214ENST00000491584 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
PTPN7-214ENST00000491584 RTEL1-TNFRSF6BF6WH68 1400 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms