RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 HSPA2P54652 639 aa25.76■■□□□ 1.71
LMNB2-203ENST00000490554 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
LMNB2-203ENST00000490554 MLECQ14165 292 aa25.75■■□□□ 1.71
LMNB2-203ENST00000490554 ATP1B4Q9UN42 357 aaPredicted RBP25.75■■□□□ 1.71
LMNB2-203ENST00000490554 EFCAB2Q5VUJ9 269 aa25.74■■□□□ 1.71
LMNB2-203ENST00000490554 EHMT2Q96KQ7 1210 aa25.74■■□□□ 1.71
LMNB2-203ENST00000490554 ARHGAP35Q9NRY4 1499 aa25.73■■□□□ 1.71
LMNB2-203ENST00000490554 CDK11AQ9UQ88 783 aaPredicted RBP25.72■■□□□ 1.71
LMNB2-203ENST00000490554 ATP10AO60312 1499 aa25.71■■□□□ 1.71
LMNB2-203ENST00000490554 C9orf84Q5VXU9 1444 aa25.68■■□□□ 1.7
LMNB2-203ENST00000490554 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
LMNB2-203ENST00000490554 ARHGEF12Q9NZN5 1544 aa25.66■■□□□ 1.7
LMNB2-203ENST00000490554 MYO5CQ9NQX4 1742 aa25.65■■□□□ 1.7
LMNB2-203ENST00000490554 FER1L4A9Z1Z3 1794 aa25.64■■□□□ 1.7
LMNB2-203ENST00000490554 KIF14Q15058 1648 aa25.64■■□□□ 1.7
LMNB2-203ENST00000490554 ZNF518AQ6AHZ1 1483 aa25.62■■□□□ 1.69
LMNB2-203ENST00000490554 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
LMNB2-203ENST00000490554 CLIP1P30622 1438 aa25.6■■□□□ 1.69
LMNB2-203ENST00000490554 ARHGAP5Q13017 1502 aa25.59■■□□□ 1.69
LMNB2-203ENST00000490554 CHIC1Q5VXU3 224 aa25.59■■□□□ 1.69
LMNB2-203ENST00000490554 KDM5CP41229 1560 aa25.58■■□□□ 1.69
LMNB2-203ENST00000490554 CEBPAP49715 358 aaPredicted RBP25.57■■□□□ 1.68
LMNB2-203ENST00000490554 CERKQ8TCT0 537 aa25.55■■□□□ 1.68
LMNB2-203ENST00000490554 MYT1LQ9UL68 1186 aa25.51■■□□□ 1.67
LMNB2-203ENST00000490554 LRRIQ1Q96JM4 1722 aa25.51■■□□□ 1.67
LMNB2-203ENST00000490554 MLH3Q9UHC1 1453 aa25.5■■□□□ 1.67
LMNB2-203ENST00000490554 DIP2CQ9Y2E4 1556 aa25.5■■□□□ 1.67
LMNB2-203ENST00000490554 PREX1Q8TCU6 1659 aa25.49■■□□□ 1.67
LMNB2-203ENST00000490554 REREQ9P2R6 1566 aa25.48■■□□□ 1.67
LMNB2-203ENST00000490554 CASKIN1Q8WXD9 1431 aa25.47■■□□□ 1.67
LMNB2-203ENST00000490554 CDC42BPBQ9Y5S2 1711 aa25.47■■□□□ 1.67
LMNB2-203ENST00000490554 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
LMNB2-203ENST00000490554 CCDC18Q5T9S5 1454 aa25.45■■□□□ 1.66
LMNB2-203ENST00000490554 UHRF1BP1Q6BDS2 1440 aa25.45■■□□□ 1.66
LMNB2-203ENST00000490554 ABCC1P33527 1531 aa25.43■■□□□ 1.66
LMNB2-203ENST00000490554 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
LMNB2-203ENST00000490554 ABCA6Q8N139 1617 aa25.43■■□□□ 1.66
LMNB2-203ENST00000490554 AGLP35573 1532 aa25.42■■□□□ 1.66
LMNB2-203ENST00000490554 DMRT2Q9Y5R5 561 aa25.42■■□□□ 1.66
LMNB2-203ENST00000490554 SETD1BQ9UPS6 1966 aaKnown RBP25.39■■□□□ 1.66
LMNB2-203ENST00000490554 STRCQ7RTU9 1775 aa25.38■■□□□ 1.65
LMNB2-203ENST00000490554 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
LMNB2-203ENST00000490554 ESF1Q9H501 851 aaKnown RBP25.36■■□□□ 1.65
LMNB2-203ENST00000490554 C3P01024 1663 aa25.34■■□□□ 1.65
LMNB2-203ENST00000490554 KIDINS220Q9ULH0 1771 aa25.33■■□□□ 1.65
LMNB2-203ENST00000490554 FYCO1Q9BQS8 1478 aa25.33■■□□□ 1.65
LMNB2-203ENST00000490554 CDC42BPAQ5VT25 1732 aa25.32■■□□□ 1.64
LMNB2-203ENST00000490554 CNTLNQ9NXG0 1405 aa25.31■■□□□ 1.64
LMNB2-203ENST00000490554 PTPRTO14522 1441 aa25.3■■□□□ 1.64
LMNB2-203ENST00000490554 ZNF777Q9ULD5 760 aaPredicted RBP25.3■■□□□ 1.64
LMNB2-203ENST00000490554 SAMD9LQ8IVG5 1584 aa25.29■■□□□ 1.64
LMNB2-203ENST00000490554 GPATCH8Q9UKJ3 1502 aaKnown RBP25.28■■□□□ 1.64
LMNB2-203ENST00000490554 HNRNPMP52272 730 aaKnown RBP eCLIP25.25■■□□□ 1.63
LMNB2-203ENST00000490554 SPAG9O60271 1321 aaKnown RBP25.25■■□□□ 1.63
LMNB2-203ENST00000490554 SYCP2Q9BX26 1530 aa25.24■■□□□ 1.63
LMNB2-203ENST00000490554 NPATQ14207 1427 aa25.21■■□□□ 1.63
LMNB2-203ENST00000490554 NCOA1Q15788 1441 aa25.21■■□□□ 1.63
LMNB2-203ENST00000490554 KIAA1107Q9UPP5 1409 aa25.21■■□□□ 1.63
LMNB2-203ENST00000490554 ZMYM3Q14202 1370 aa25.2■■□□□ 1.63
LMNB2-203ENST00000490554 CFDP1Q9UEE9 299 aaPredicted RBP25.2■■□□□ 1.62
LMNB2-203ENST00000490554 PLEKHH2Q8IVE3 1493 aa25.18■■□□□ 1.62
LMNB2-203ENST00000490554 LTBP4Q8N2S1 1624 aa25.17■■□□□ 1.62
LMNB2-203ENST00000490554 CCNB3Q8WWL7 1395 aa25.17■■□□□ 1.62
LMNB2-203ENST00000490554 ATP7AQ04656 1500 aa25.17■■□□□ 1.62
LMNB2-203ENST00000490554 MROH2AA6NES4 1674 aa25.17■■□□□ 1.62
LMNB2-203ENST00000490554 A2MP01023 1474 aa25.15■■□□□ 1.62
LMNB2-203ENST00000490554 PLXNC1O60486 1568 aa25.14■■□□□ 1.61
LMNB2-203ENST00000490554 INO80Q9ULG1 1556 aaPredicted RBP25.13■■□□□ 1.61
LMNB2-203ENST00000490554 CAMSAP1Q5T5Y3 1602 aa25.12■■□□□ 1.61
LMNB2-203ENST00000490554 SUPT6HQ7KZ85 1726 aaKnown RBP25.12■■□□□ 1.61
LMNB2-203ENST00000490554 MTUS2Q5JR59 1369 aa25.12■■□□□ 1.61
LMNB2-203ENST00000490554 DISP3Q9P2K9 1392 aa25.11■■□□□ 1.61
LMNB2-203ENST00000490554 IQSEC2Q5JU85 1478 aa25.1■■□□□ 1.61
LMNB2-203ENST00000490554 GGT6Q6P531 493 aa25.08■■□□□ 1.61
LMNB2-203ENST00000490554 PTPRKQ15262 1439 aa25.08■■□□□ 1.61
LMNB2-203ENST00000490554 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.6
LMNB2-203ENST00000490554 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
LMNB2-203ENST00000490554 ILDR2Q71H61 639 aa25.06■■□□□ 1.6
LMNB2-203ENST00000490554 PPP6R1Q9UPN7 881 aa25.06■■□□□ 1.6
LMNB2-203ENST00000490554 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
LMNB2-203ENST00000490554 PLA2R1Q13018 1463 aa25.03■■□□□ 1.6
LMNB2-203ENST00000490554 MBD5Q9P267 1494 aa25.03■■□□□ 1.6
LMNB2-203ENST00000490554 PKD2Q13563 968 aa25.03■■□□□ 1.6
LMNB2-203ENST00000490554 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
LMNB2-203ENST00000490554 MYO3AQ8NEV4 1616 aa25.01■■□□□ 1.59
LMNB2-203ENST00000490554 ZNF335Q9H4Z2 1342 aaPredicted RBP25.01■■□□□ 1.59
LMNB2-203ENST00000490554 ZNF142P52746 1687 aaPredicted RBP25.01■■□□□ 1.59
LMNB2-203ENST00000490554 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
LMNB2-203ENST00000490554 TCOF1Q13428 1488 aaKnown RBP25■■□□□ 1.59
LMNB2-203ENST00000490554 CEP170BQ9Y4F5 1589 aaPredicted RBP25■■□□□ 1.59
LMNB2-203ENST00000490554 CEP162Q5TB80 1403 aa24.99■■□□□ 1.59
LMNB2-203ENST00000490554 EHBP1L1Q8N3D4 1523 aa24.99■■□□□ 1.59
LMNB2-203ENST00000490554 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
LMNB2-203ENST00000490554 DHX29Q7Z478 1369 aaKnown RBP24.97■■□□□ 1.59
LMNB2-203ENST00000490554 SOCS7O14512 581 aa24.94■■□□□ 1.58
LMNB2-203ENST00000490554 SPATA31D1Q6ZQQ2 1576 aa24.93■■□□□ 1.58
LMNB2-203ENST00000490554 A2ML1A8K2U0 1454 aa24.92■■□□□ 1.58
LMNB2-203ENST00000490554 UBAP1LF5GYI3 381 aa24.91■■□□□ 1.58
LMNB2-203ENST00000490554 KIF3BO15066 747 aa24.89■■□□□ 1.58
LMNB2-203ENST00000490554 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms