RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 LMOD2Q6P5Q4 547 aa10.1□□□□□ -0.79
SSX2IP-208ENST00000490476 LARP6Q9BRS8 491 aaKnown RBP10.1□□□□□ -0.79
SSX2IP-208ENST00000490476 TRIM35Q9UPQ4 493 aa10.1□□□□□ -0.79
SSX2IP-208ENST00000490476 POTEFA5A3E0 1075 aa10.09□□□□□ -0.79
SSX2IP-208ENST00000490476 NCKAP5LQ9HCH0 1330 aa10.08□□□□□ -0.8
SSX2IP-208ENST00000490476 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
SSX2IP-208ENST00000490476 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.08□□□□□ -0.8
SSX2IP-208ENST00000490476 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
SSX2IP-208ENST00000490476 TULP1O00294 542 aaPredicted RBP10.07□□□□□ -0.8
SSX2IP-208ENST00000490476 PDE4AP27815 886 aa10.06□□□□□ -0.8
SSX2IP-208ENST00000490476 SEC24BO95487 1268 aa10.05□□□□□ -0.8
SSX2IP-208ENST00000490476 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
SSX2IP-208ENST00000490476 SEMA3EO15041 775 aa10.03□□□□□ -0.8
SSX2IP-208ENST00000490476 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
SSX2IP-208ENST00000490476 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.81
SSX2IP-208ENST00000490476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSX2IP-208ENST00000490476 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
SSX2IP-208ENST00000490476 MFSD10Q14728 455 aa9.98□□□□□ -0.81
SSX2IP-208ENST00000490476 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
SSX2IP-208ENST00000490476 TESPA1A2RU30 521 aaPredicted RBP9.97□□□□□ -0.81
SSX2IP-208ENST00000490476 PLCG2P16885 1265 aa9.97□□□□□ -0.81
SSX2IP-208ENST00000490476 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
SSX2IP-208ENST00000490476 BICRAQ9NZM4 1560 aa9.95□□□□□ -0.82
SSX2IP-208ENST00000490476 OCEL1Q9H607 264 aa9.94□□□□□ -0.82
SSX2IP-208ENST00000490476 DPY19L2Q6NUT2 758 aa9.93□□□□□ -0.82
SSX2IP-208ENST00000490476 ZC3H15Q8WU90 426 aaKnown RBP9.93□□□□□ -0.82
SSX2IP-208ENST00000490476 PPP1R15BQ5SWA1 713 aa9.91□□□□□ -0.82
SSX2IP-208ENST00000490476 SMYD5Q6GMV2 418 aa9.91□□□□□ -0.82
SSX2IP-208ENST00000490476 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
SSX2IP-208ENST00000490476 GPHNQ9NQX3 736 aaPredicted RBP9.89□□□□□ -0.83
SSX2IP-208ENST00000490476 MICALL2Q8IY33 904 aa9.87□□□□□ -0.83
SSX2IP-208ENST00000490476 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
SSX2IP-208ENST00000490476 SLC24A3Q9HC58 644 aa9.86□□□□□ -0.83
SSX2IP-208ENST00000490476 ARIH1Q9Y4X5 557 aaPredicted RBP9.86□□□□□ -0.83
SSX2IP-208ENST00000490476 POTEMA6NI47 508 aa9.85□□□□□ -0.83
SSX2IP-208ENST00000490476 DSG2Q14126 1118 aa9.85□□□□□ -0.83
SSX2IP-208ENST00000490476 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
SSX2IP-208ENST00000490476 DPYSL4O14531 572 aa9.84□□□□□ -0.83
SSX2IP-208ENST00000490476 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
SSX2IP-208ENST00000490476 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
SSX2IP-208ENST00000490476 G3V3G9 751 aa9.83□□□□□ -0.84
SSX2IP-208ENST00000490476 POTEGQ6S5H5 508 aa9.83□□□□□ -0.84
SSX2IP-208ENST00000490476 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
SSX2IP-208ENST00000490476 NACADO15069 1562 aa9.83□□□□□ -0.84
SSX2IP-208ENST00000490476 RBM26Q5T8P6 1007 aaKnown RBP9.82□□□□□ -0.84
SSX2IP-208ENST00000490476 SLAIN1Q8ND83 568 aa9.82□□□□□ -0.84
SSX2IP-208ENST00000490476 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
SSX2IP-208ENST00000490476 BRPF1P55201 1214 aaPredicted RBP9.81□□□□□ -0.84
SSX2IP-208ENST00000490476 NEUROD2Q15784 382 aa9.81□□□□□ -0.84
SSX2IP-208ENST00000490476 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
SSX2IP-208ENST00000490476 FAM163AQ96GL9 167 aaPredicted RBP9.81□□□□□ -0.84
SSX2IP-208ENST00000490476 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
SSX2IP-208ENST00000490476 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
SSX2IP-208ENST00000490476 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
SSX2IP-208ENST00000490476 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
SSX2IP-208ENST00000490476 ZMYND10O75800 440 aa9.79□□□□□ -0.84
SSX2IP-208ENST00000490476 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
SSX2IP-208ENST00000490476 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.78□□□□□ -0.84
SSX2IP-208ENST00000490476 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
SSX2IP-208ENST00000490476 FOXK1P85037 733 aa9.77□□□□□ -0.85
SSX2IP-208ENST00000490476 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
SSX2IP-208ENST00000490476 ERCC6Q03468 1493 aa9.77□□□□□ -0.85
SSX2IP-208ENST00000490476 SPDYE16A6NNV3 312 aaPredicted RBP9.75□□□□□ -0.85
SSX2IP-208ENST00000490476 KRI1Q8N9T8 703 aaKnown RBP9.75□□□□□ -0.85
SSX2IP-208ENST00000490476 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
SSX2IP-208ENST00000490476 BARGINQ6ZT62 677 aa9.74□□□□□ -0.85
SSX2IP-208ENST00000490476 PDIA6Q15084 440 aa9.73□□□□□ -0.85
SSX2IP-208ENST00000490476 TMEM121BQ9BXQ6 578 aaPredicted RBP9.73□□□□□ -0.85
SSX2IP-208ENST00000490476 SNPHO15079 494 aa9.72□□□□□ -0.85
SSX2IP-208ENST00000490476 MAP3K9P80192 1104 aa9.72□□□□□ -0.85
SSX2IP-208ENST00000490476 C3orf67Q6ZVT6 689 aa9.72□□□□□ -0.85
SSX2IP-208ENST00000490476 UPF1Q92900 1129 aaKnown RBP eCLIP9.72□□□□□ -0.85
SSX2IP-208ENST00000490476 GRXCR2A6NFK2 248 aa9.71□□□□□ -0.86
SSX2IP-208ENST00000490476 KIF3CO14782 793 aa9.69□□□□□ -0.86
SSX2IP-208ENST00000490476 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
SSX2IP-208ENST00000490476 AK7Q96M32 723 aa9.68□□□□□ -0.86
SSX2IP-208ENST00000490476 ST18O60284 1047 aa9.67□□□□□ -0.86
SSX2IP-208ENST00000490476 TMEM92Q6UXU6 159 aa9.66□□□□□ -0.86
SSX2IP-208ENST00000490476 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
SSX2IP-208ENST00000490476 PLSCR2Q9NRY7 297 aa9.65□□□□□ -0.86
SSX2IP-208ENST00000490476 DDX12PQ92771 950 aa9.63□□□□□ -0.87
SSX2IP-208ENST00000490476 GPBP1L1Q9HC44 474 aaPredicted RBP9.63□□□□□ -0.87
SSX2IP-208ENST00000490476 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
SSX2IP-208ENST00000490476 TBC1D12O60347 775 aa9.6□□□□□ -0.87
SSX2IP-208ENST00000490476 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
SSX2IP-208ENST00000490476 TRIM66O15016 1216 aa9.59□□□□□ -0.87
SSX2IP-208ENST00000490476 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
SSX2IP-208ENST00000490476 GPR37O15354 613 aa9.58□□□□□ -0.88
SSX2IP-208ENST00000490476 EVI5O60447 810 aa9.58□□□□□ -0.88
SSX2IP-208ENST00000490476 RIMBP3CA6NJZ7 1639 aa9.57□□□□□ -0.88
SSX2IP-208ENST00000490476 RIMBP3BA6NNM3 1639 aa9.57□□□□□ -0.88
SSX2IP-208ENST00000490476 RIMBP3Q9UFD9 1639 aa9.57□□□□□ -0.88
SSX2IP-208ENST00000490476 OSBPP22059 807 aa9.57□□□□□ -0.88
SSX2IP-208ENST00000490476 PDE4DQ08499 809 aa9.57□□□□□ -0.88
SSX2IP-208ENST00000490476 CDAN1Q8IWY9 1227 aa9.57□□□□□ -0.88
SSX2IP-208ENST00000490476 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
SSX2IP-208ENST00000490476 KDM4CQ9H3R0 1056 aa9.56□□□□□ -0.88
SSX2IP-208ENST00000490476 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
SSX2IP-208ENST00000490476 THOC2Q8NI27 1593 aaKnown RBP9.54□□□□□ -0.88
SSX2IP-208ENST00000490476 PTGER2P43116 358 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms