RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 DNAJC5Q9H3Z4 198 aa9.65□□□□□ -0.86
SF3A3-207ENST00000488934 FBXO22Q8NEZ5 403 aa9.64□□□□□ -0.87
SF3A3-207ENST00000488934 BAZ1AQ9NRL2 1556 aaPredicted RBP9.63□□□□□ -0.87
SF3A3-207ENST00000488934 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
SF3A3-207ENST00000488934 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
SF3A3-207ENST00000488934 MICALL2Q8IY33 904 aa9.6□□□□□ -0.87
SF3A3-207ENST00000488934 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-207ENST00000488934 SMARCA2P51531 1590 aa9.59□□□□□ -0.87
SF3A3-207ENST00000488934 SNPHO15079 494 aa9.59□□□□□ -0.87
SF3A3-207ENST00000488934 NCAPD3P42695 1498 aa9.55□□□□□ -0.88
SF3A3-207ENST00000488934 HMGXB3Q12766 1538 aa9.55□□□□□ -0.88
SF3A3-207ENST00000488934 PEG3Q9GZU2 1588 aa9.54□□□□□ -0.88
SF3A3-207ENST00000488934 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
SF3A3-207ENST00000488934 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.89
SF3A3-207ENST00000488934 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
SF3A3-207ENST00000488934 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.51□□□□□ -0.89
SF3A3-207ENST00000488934 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
SF3A3-207ENST00000488934 MROH2BQ7Z745 1585 aa9.49□□□□□ -0.89
SF3A3-207ENST00000488934 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-207ENST00000488934 PPP1R37O75864 691 aa9.47□□□□□ -0.89
SF3A3-207ENST00000488934 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
SF3A3-207ENST00000488934 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
SF3A3-207ENST00000488934 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
SF3A3-207ENST00000488934 DOK7Q18PE1 504 aa9.45□□□□□ -0.9
SF3A3-207ENST00000488934 ZNF710Q8N1W2 664 aa9.42□□□□□ -0.9
SF3A3-207ENST00000488934 TMEM92Q6UXU6 159 aa9.41□□□□□ -0.9
SF3A3-207ENST00000488934 SPRYD3Q8NCJ5 442 aa9.41□□□□□ -0.9
SF3A3-207ENST00000488934 WIZO95785 1651 aa9.41□□□□□ -0.9
SF3A3-207ENST00000488934 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
SF3A3-207ENST00000488934 ST18O60284 1047 aa9.39□□□□□ -0.91
SF3A3-207ENST00000488934 KIF3CO14782 793 aa9.37□□□□□ -0.91
SF3A3-207ENST00000488934 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
SF3A3-207ENST00000488934 RSF1Q96T23 1441 aaPredicted RBP9.37□□□□□ -0.91
SF3A3-207ENST00000488934 POTEMA6NI47 508 aa9.36□□□□□ -0.91
SF3A3-207ENST00000488934 LAMC3Q9Y6N6 1575 aa9.36□□□□□ -0.91
SF3A3-207ENST00000488934 HOXB3P14651 431 aaPredicted RBP9.35□□□□□ -0.91
SF3A3-207ENST00000488934 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
SF3A3-207ENST00000488934 PDE4AP27815 886 aa9.34□□□□□ -0.91
SF3A3-207ENST00000488934 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
SF3A3-207ENST00000488934 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
SF3A3-207ENST00000488934 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
SF3A3-207ENST00000488934 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-207ENST00000488934 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
SF3A3-207ENST00000488934 FOXK1P85037 733 aa9.32□□□□□ -0.92
SF3A3-207ENST00000488934 LCE2DQ5TA82 110 aaPredicted RBP9.32□□□□□ -0.92
SF3A3-207ENST00000488934 EMP3P54852 163 aa9.31□□□□□ -0.92
SF3A3-207ENST00000488934 HOXB1P14653 301 aaPredicted RBP9.3□□□□□ -0.92
SF3A3-207ENST00000488934 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
SF3A3-207ENST00000488934 SLC34A2O95436 690 aa9.29□□□□□ -0.92
SF3A3-207ENST00000488934 PLPP6Q8IY26 295 aa9.29□□□□□ -0.92
SF3A3-207ENST00000488934 NESP48681 1621 aa9.28□□□□□ -0.92
SF3A3-207ENST00000488934 PCDH10Q9P2E7 1040 aa9.28□□□□□ -0.92
SF3A3-207ENST00000488934 DSG2Q14126 1118 aa9.27□□□□□ -0.93
SF3A3-207ENST00000488934 PPP1R15BQ5SWA1 713 aa9.27□□□□□ -0.93
SF3A3-207ENST00000488934 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
SF3A3-207ENST00000488934 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.93
SF3A3-207ENST00000488934 CUX2O14529 1486 aa9.27□□□□□ -0.93
SF3A3-207ENST00000488934 CADPSQ9ULU8 1353 aa9.26□□□□□ -0.93
SF3A3-207ENST00000488934 TBC1D12O60347 775 aa9.26□□□□□ -0.93
SF3A3-207ENST00000488934 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
SF3A3-207ENST00000488934 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
SF3A3-207ENST00000488934 NCKAP5LQ9HCH0 1330 aa9.25□□□□□ -0.93
SF3A3-207ENST00000488934 PRDM2Q13029 1718 aa9.25□□□□□ -0.93
SF3A3-207ENST00000488934 KIF21AQ7Z4S6 1674 aa9.24□□□□□ -0.93
SF3A3-207ENST00000488934 GPR153Q6NV75 609 aa9.23□□□□□ -0.93
SF3A3-207ENST00000488934 ERBB3P21860 1342 aa9.23□□□□□ -0.93
SF3A3-207ENST00000488934 MFSD10Q14728 455 aa9.22□□□□□ -0.93
SF3A3-207ENST00000488934 ARSIQ5FYB1 569 aa9.22□□□□□ -0.93
SF3A3-207ENST00000488934 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
SF3A3-207ENST00000488934 CFTRP13569 1480 aa9.21□□□□□ -0.93
SF3A3-207ENST00000488934 THOC2Q8NI27 1593 aaKnown RBP9.21□□□□□ -0.93
SF3A3-207ENST00000488934 FAM205CA6NFA0 338 aa9.21□□□□□ -0.94
SF3A3-207ENST00000488934 PTCD2Q8WV60 388 aaKnown RBP9.21□□□□□ -0.94
SF3A3-207ENST00000488934 ZNF316A6NFI3 1004 aaPredicted RBP9.2□□□□□ -0.94
SF3A3-207ENST00000488934 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
SF3A3-207ENST00000488934 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
SF3A3-207ENST00000488934 CEP164Q9UPV0 1460 aa9.19□□□□□ -0.94
SF3A3-207ENST00000488934 CDAN1Q8IWY9 1227 aa9.18□□□□□ -0.94
SF3A3-207ENST00000488934 WDR70Q9NW82 654 aa9.18□□□□□ -0.94
SF3A3-207ENST00000488934 CCDC88BA6NC98 1476 aa9.17□□□□□ -0.94
SF3A3-207ENST00000488934 MRC2Q9UBG0 1479 aa9.17□□□□□ -0.94
SF3A3-207ENST00000488934 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
SF3A3-207ENST00000488934 PSDA5PKW4 1024 aaPredicted RBP9.16□□□□□ -0.94
SF3A3-207ENST00000488934 NUDT7P0C024 238 aa9.16□□□□□ -0.94
SF3A3-207ENST00000488934 UPF1Q92900 1129 aaKnown RBP eCLIP9.16□□□□□ -0.94
SF3A3-207ENST00000488934 VARS2Q5ST30 1063 aaKnown RBP9.15□□□□□ -0.94
SF3A3-207ENST00000488934 OXER1Q8TDS5 423 aa9.15□□□□□ -0.94
SF3A3-207ENST00000488934 WDR62O43379 1518 aa9.15□□□□□ -0.95
SF3A3-207ENST00000488934 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
SF3A3-207ENST00000488934 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.95
SF3A3-207ENST00000488934 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
SF3A3-207ENST00000488934 LHX6Q9UPM6 363 aa9.1□□□□□ -0.95
SF3A3-207ENST00000488934 CAMK2BQ13554 666 aa9.09□□□□□ -0.95
SF3A3-207ENST00000488934 ZNF687Q8N1G0 1237 aa9.09□□□□□ -0.95
SF3A3-207ENST00000488934 ABCC8Q09428 1581 aa9.08□□□□□ -0.96
SF3A3-207ENST00000488934 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
SF3A3-207ENST00000488934 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
SF3A3-207ENST00000488934 SUPT5HO00267 1087 aaKnown RBP9.07□□□□□ -0.96
SF3A3-207ENST00000488934 E2F4Q16254 413 aa9.07□□□□□ -0.96
SF3A3-207ENST00000488934 POTEB3A0JP26 581 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms