RNA–Protein interactions for RNA: ENST00000488268.5

ECHDC2-216, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 631 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-216ENST00000488268 LTBP4Q8N2S1 1624 aa17.81■□□□□ 0.44
ECHDC2-216ENST00000488268 P3H3Q8IVL6 736 aa17.8■□□□□ 0.44
ECHDC2-216ENST00000488268 NUP153P49790 1475 aaKnown RBP17.8■□□□□ 0.44
ECHDC2-216ENST00000488268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.79■□□□□ 0.44
ECHDC2-216ENST00000488268 MLECQ14165 292 aa17.79■□□□□ 0.44
ECHDC2-216ENST00000488268 IQSEC2Q5JU85 1478 aa17.78■□□□□ 0.44
ECHDC2-216ENST00000488268 PTPRTO14522 1441 aa17.78■□□□□ 0.44
ECHDC2-216ENST00000488268 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
ECHDC2-216ENST00000488268 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
ECHDC2-216ENST00000488268 EEA1Q15075 1411 aa17.75■□□□□ 0.43
ECHDC2-216ENST00000488268 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
ECHDC2-216ENST00000488268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
ECHDC2-216ENST00000488268 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
ECHDC2-216ENST00000488268 ATP10AO60312 1499 aa17.73■□□□□ 0.43
ECHDC2-216ENST00000488268 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
ECHDC2-216ENST00000488268 C3P01024 1663 aa17.71■□□□□ 0.42
ECHDC2-216ENST00000488268 C9orf84Q5VXU9 1444 aa17.7■□□□□ 0.42
ECHDC2-216ENST00000488268 PLEKHD1A6NEE1 506 aa17.68■□□□□ 0.42
ECHDC2-216ENST00000488268 SCAPERQ9BY12 1400 aa17.67■□□□□ 0.42
ECHDC2-216ENST00000488268 PLCH2O75038 1416 aa17.64■□□□□ 0.41
ECHDC2-216ENST00000488268 NCOA1Q15788 1441 aa17.62■□□□□ 0.41
ECHDC2-216ENST00000488268 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
ECHDC2-216ENST00000488268 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
ECHDC2-216ENST00000488268 KDM5CP41229 1560 aa17.59■□□□□ 0.41
ECHDC2-216ENST00000488268 RANGAP1P46060 587 aaPredicted RBP17.59■□□□□ 0.41
ECHDC2-216ENST00000488268 DIP2CQ9Y2E4 1556 aa17.58■□□□□ 0.41
ECHDC2-216ENST00000488268 UBTFP17480 764 aaKnown RBP17.57■□□□□ 0.4
ECHDC2-216ENST00000488268 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
ECHDC2-216ENST00000488268 MED1Q15648 1581 aaPredicted RBP17.55■□□□□ 0.4
ECHDC2-216ENST00000488268 ZNF518AQ6AHZ1 1483 aa17.55■□□□□ 0.4
ECHDC2-216ENST00000488268 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
ECHDC2-216ENST00000488268 ABCA6Q8N139 1617 aa17.54■□□□□ 0.4
ECHDC2-216ENST00000488268 CDK13Q14004 1512 aaKnown RBP17.54■□□□□ 0.4
ECHDC2-216ENST00000488268 AGLP35573 1532 aa17.53■□□□□ 0.4
ECHDC2-216ENST00000488268 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
ECHDC2-216ENST00000488268 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
ECHDC2-216ENST00000488268 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
ECHDC2-216ENST00000488268 MROH2AA6NES4 1674 aa17.49■□□□□ 0.39
ECHDC2-216ENST00000488268 AFAP1Q8N556 730 aa17.49■□□□□ 0.39
ECHDC2-216ENST00000488268 MLH3Q9UHC1 1453 aa17.48■□□□□ 0.39
ECHDC2-216ENST00000488268 KIF14Q15058 1648 aa17.47■□□□□ 0.39
ECHDC2-216ENST00000488268 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
ECHDC2-216ENST00000488268 ZNF142P52746 1687 aaPredicted RBP17.47■□□□□ 0.39
ECHDC2-216ENST00000488268 CDC42BPBQ9Y5S2 1711 aa17.46■□□□□ 0.39
ECHDC2-216ENST00000488268 NPATQ14207 1427 aa17.46■□□□□ 0.39
ECHDC2-216ENST00000488268 CNTLNQ9NXG0 1405 aa17.45■□□□□ 0.38
ECHDC2-216ENST00000488268 KIDINS220Q9ULH0 1771 aa17.44■□□□□ 0.38
ECHDC2-216ENST00000488268 NCKAP5LQ9HCH0 1330 aa17.44■□□□□ 0.38
ECHDC2-216ENST00000488268 PLA2R1Q13018 1463 aa17.43■□□□□ 0.38
ECHDC2-216ENST00000488268 HSPA1LP34931 641 aa17.42■□□□□ 0.38
ECHDC2-216ENST00000488268 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
ECHDC2-216ENST00000488268 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
ECHDC2-216ENST00000488268 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
ECHDC2-216ENST00000488268 ITSN2Q9NZM3 1697 aa17.4■□□□□ 0.38
ECHDC2-216ENST00000488268 ESF1Q9H501 851 aaKnown RBP17.4■□□□□ 0.38
ECHDC2-216ENST00000488268 LOC105371045A0A1W2PR82 267 aa17.38■□□□□ 0.37
ECHDC2-216ENST00000488268 PKD2Q13563 968 aa17.38■□□□□ 0.37
ECHDC2-216ENST00000488268 ABCC1P33527 1531 aa17.37■□□□□ 0.37
ECHDC2-216ENST00000488268 CEP170BQ9Y4F5 1589 aaPredicted RBP17.36■□□□□ 0.37
ECHDC2-216ENST00000488268 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
ECHDC2-216ENST00000488268 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
ECHDC2-216ENST00000488268 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
ECHDC2-216ENST00000488268 CLTCQ00610 1675 aaKnown RBP17.36■□□□□ 0.37
ECHDC2-216ENST00000488268 PREX2Q70Z35 1606 aa17.35■□□□□ 0.37
ECHDC2-216ENST00000488268 TROQ12816 1431 aaPredicted RBP17.34■□□□□ 0.37
ECHDC2-216ENST00000488268 ALKQ9UM73 1620 aa17.33■□□□□ 0.37
ECHDC2-216ENST00000488268 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
ECHDC2-216ENST00000488268 CPS1P31327 1500 aa17.31■□□□□ 0.36
ECHDC2-216ENST00000488268 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
ECHDC2-216ENST00000488268 PIP4K2BP78356 416 aa17.3■□□□□ 0.36
ECHDC2-216ENST00000488268 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
ECHDC2-216ENST00000488268 CDK11AQ9UQ88 783 aaPredicted RBP17.3■□□□□ 0.36
ECHDC2-216ENST00000488268 TOM1O60784 492 aa17.29■□□□□ 0.36
ECHDC2-216ENST00000488268 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
ECHDC2-216ENST00000488268 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
ECHDC2-216ENST00000488268 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
ECHDC2-216ENST00000488268 SAMD9LQ8IVG5 1584 aa17.28■□□□□ 0.36
ECHDC2-216ENST00000488268 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
ECHDC2-216ENST00000488268 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
ECHDC2-216ENST00000488268 CLIP1P30622 1438 aa17.26■□□□□ 0.35
ECHDC2-216ENST00000488268 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
ECHDC2-216ENST00000488268 PLXNC1O60486 1568 aa17.26■□□□□ 0.35
ECHDC2-216ENST00000488268 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
ECHDC2-216ENST00000488268 A2ML1A8K2U0 1454 aa17.23■□□□□ 0.35
ECHDC2-216ENST00000488268 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
ECHDC2-216ENST00000488268 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
ECHDC2-216ENST00000488268 ARHGAP35Q9NRY4 1499 aa17.22■□□□□ 0.35
ECHDC2-216ENST00000488268 RGS17Q9UGC6 210 aaPredicted RBP17.2■□□□□ 0.34
ECHDC2-216ENST00000488268 CEP162Q5TB80 1403 aa17.2■□□□□ 0.34
ECHDC2-216ENST00000488268 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
ECHDC2-216ENST00000488268 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
ECHDC2-216ENST00000488268 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
ECHDC2-216ENST00000488268 A2MP01023 1474 aa17.16■□□□□ 0.34
ECHDC2-216ENST00000488268 SYCP2Q9BX26 1530 aa17.16■□□□□ 0.34
ECHDC2-216ENST00000488268 ADGBQ8N7X0 1667 aa17.14■□□□□ 0.33
ECHDC2-216ENST00000488268 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
ECHDC2-216ENST00000488268 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
ECHDC2-216ENST00000488268 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
ECHDC2-216ENST00000488268 MED14O60244 1454 aa17.12■□□□□ 0.33
ECHDC2-216ENST00000488268 GGT6Q6P531 493 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms