RNA–Protein interactions for RNA: ENST00000486851.5

ELL3-205, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-205ENST00000486851 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
ELL3-205ENST00000486851 EEA1Q15075 1411 aa17.85■□□□□ 0.45
ELL3-205ENST00000486851 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
ELL3-205ENST00000486851 KDM5CP41229 1560 aa17.84■□□□□ 0.45
ELL3-205ENST00000486851 ATP10AO60312 1499 aa17.83■□□□□ 0.45
ELL3-205ENST00000486851 C9orf84Q5VXU9 1444 aa17.82■□□□□ 0.44
ELL3-205ENST00000486851 MYO5CQ9NQX4 1742 aa17.8■□□□□ 0.44
ELL3-205ENST00000486851 KIF14Q15058 1648 aa17.8■□□□□ 0.44
ELL3-205ENST00000486851 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
ELL3-205ENST00000486851 DIP2CQ9Y2E4 1556 aa17.77■□□□□ 0.44
ELL3-205ENST00000486851 SETD1BQ9UPS6 1966 aaKnown RBP17.77■□□□□ 0.43
ELL3-205ENST00000486851 LRRIQ1Q96JM4 1722 aa17.75■□□□□ 0.43
ELL3-205ENST00000486851 MLECQ14165 292 aa17.75■□□□□ 0.43
ELL3-205ENST00000486851 ILDR2Q71H61 639 aa17.75■□□□□ 0.43
ELL3-205ENST00000486851 ZNF518AQ6AHZ1 1483 aa17.75■□□□□ 0.43
ELL3-205ENST00000486851 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
ELL3-205ENST00000486851 ABCA6Q8N139 1617 aa17.73■□□□□ 0.43
ELL3-205ENST00000486851 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
ELL3-205ENST00000486851 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
ELL3-205ENST00000486851 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
ELL3-205ENST00000486851 LTBP4Q8N2S1 1624 aa17.72■□□□□ 0.43
ELL3-205ENST00000486851 C3P01024 1663 aa17.72■□□□□ 0.43
ELL3-205ENST00000486851 CDC42BPBQ9Y5S2 1711 aa17.71■□□□□ 0.43
ELL3-205ENST00000486851 AGLP35573 1532 aa17.71■□□□□ 0.43
ELL3-205ENST00000486851 MLH3Q9UHC1 1453 aa17.7■□□□□ 0.42
ELL3-205ENST00000486851 PTPRTO14522 1441 aa17.7■□□□□ 0.42
ELL3-205ENST00000486851 TROQ12816 1431 aaPredicted RBP17.7■□□□□ 0.42
ELL3-205ENST00000486851 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
ELL3-205ENST00000486851 FMN1Q68DA7 1419 aa17.68■□□□□ 0.42
ELL3-205ENST00000486851 UHRF1BP1Q6BDS2 1440 aa17.68■□□□□ 0.42
ELL3-205ENST00000486851 AFAP1Q8N556 730 aa17.67■□□□□ 0.42
ELL3-205ENST00000486851 ABCC1P33527 1531 aa17.67■□□□□ 0.42
ELL3-205ENST00000486851 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
ELL3-205ENST00000486851 KIDINS220Q9ULH0 1771 aa17.65■□□□□ 0.42
ELL3-205ENST00000486851 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
ELL3-205ENST00000486851 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.42
ELL3-205ENST00000486851 ITSN2Q9NZM3 1697 aa17.64■□□□□ 0.41
ELL3-205ENST00000486851 SOCS7O14512 581 aa17.63■□□□□ 0.41
ELL3-205ENST00000486851 NCOA1Q15788 1441 aa17.63■□□□□ 0.41
ELL3-205ENST00000486851 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
ELL3-205ENST00000486851 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
ELL3-205ENST00000486851 DISP3Q9P2K9 1392 aa17.62■□□□□ 0.41
ELL3-205ENST00000486851 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
ELL3-205ENST00000486851 CDC42BPAQ5VT25 1732 aa17.58■□□□□ 0.4
ELL3-205ENST00000486851 MROH2AA6NES4 1674 aa17.58■□□□□ 0.4
ELL3-205ENST00000486851 SAMD9LQ8IVG5 1584 aa17.55■□□□□ 0.4
ELL3-205ENST00000486851 CDK11AQ9UQ88 783 aaPredicted RBP17.55■□□□□ 0.4
ELL3-205ENST00000486851 CLIP1P30622 1438 aa17.55■□□□□ 0.4
ELL3-205ENST00000486851 NPATQ14207 1427 aa17.55■□□□□ 0.4
ELL3-205ENST00000486851 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
ELL3-205ENST00000486851 PLXNC1O60486 1568 aa17.53■□□□□ 0.4
ELL3-205ENST00000486851 ZNF142P52746 1687 aaPredicted RBP17.53■□□□□ 0.4
ELL3-205ENST00000486851 CAMSAP1Q5T5Y3 1602 aa17.52■□□□□ 0.4
ELL3-205ENST00000486851 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
ELL3-205ENST00000486851 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
ELL3-205ENST00000486851 CCDC18Q5T9S5 1454 aa17.49■□□□□ 0.39
ELL3-205ENST00000486851 INO80Q9ULG1 1556 aaPredicted RBP17.49■□□□□ 0.39
ELL3-205ENST00000486851 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
ELL3-205ENST00000486851 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
ELL3-205ENST00000486851 SYCP2Q9BX26 1530 aa17.47■□□□□ 0.39
ELL3-205ENST00000486851 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
ELL3-205ENST00000486851 ATP1B4Q9UN42 357 aaPredicted RBP17.46■□□□□ 0.39
ELL3-205ENST00000486851 GPATCH8Q9UKJ3 1502 aaKnown RBP17.46■□□□□ 0.39
ELL3-205ENST00000486851 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
ELL3-205ENST00000486851 PTPRKQ15262 1439 aa17.45■□□□□ 0.38
ELL3-205ENST00000486851 CLTCQ00610 1675 aaKnown RBP17.44■□□□□ 0.38
ELL3-205ENST00000486851 CEP170BQ9Y4F5 1589 aaPredicted RBP17.44■□□□□ 0.38
ELL3-205ENST00000486851 ATP7AQ04656 1500 aa17.43■□□□□ 0.38
ELL3-205ENST00000486851 SUPT6HQ7KZ85 1726 aaKnown RBP17.43■□□□□ 0.38
ELL3-205ENST00000486851 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
ELL3-205ENST00000486851 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
ELL3-205ENST00000486851 FYCO1Q9BQS8 1478 aa17.41■□□□□ 0.38
ELL3-205ENST00000486851 NCKAP5LQ9HCH0 1330 aa17.4■□□□□ 0.38
ELL3-205ENST00000486851 A2MP01023 1474 aa17.38■□□□□ 0.37
ELL3-205ENST00000486851 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
ELL3-205ENST00000486851 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
ELL3-205ENST00000486851 MYT1LQ9UL68 1186 aa17.37■□□□□ 0.37
ELL3-205ENST00000486851 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
ELL3-205ENST00000486851 PKD2Q13563 968 aa17.35■□□□□ 0.37
ELL3-205ENST00000486851 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
ELL3-205ENST00000486851 SPAG9O60271 1321 aaKnown RBP17.35■□□□□ 0.37
ELL3-205ENST00000486851 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
ELL3-205ENST00000486851 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
ELL3-205ENST00000486851 ADGBQ8N7X0 1667 aa17.33■□□□□ 0.37
ELL3-205ENST00000486851 A2ML1A8K2U0 1454 aa17.33■□□□□ 0.37
ELL3-205ENST00000486851 HNRNPMP52272 730 aaKnown RBP eCLIP17.33■□□□□ 0.36
ELL3-205ENST00000486851 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
ELL3-205ENST00000486851 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
ELL3-205ENST00000486851 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
ELL3-205ENST00000486851 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
ELL3-205ENST00000486851 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
ELL3-205ENST00000486851 MED1Q15648 1581 aaPredicted RBP17.29■□□□□ 0.36
ELL3-205ENST00000486851 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
ELL3-205ENST00000486851 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
ELL3-205ENST00000486851 ZNF777Q9ULD5 760 aaPredicted RBP17.27■□□□□ 0.36
ELL3-205ENST00000486851 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
ELL3-205ENST00000486851 CPS1P31327 1500 aa17.26■□□□□ 0.35
ELL3-205ENST00000486851 FAM135AQ9P2D6 1515 aa17.25■□□□□ 0.35
ELL3-205ENST00000486851 PZPP20742 1482 aa17.24■□□□□ 0.35
ELL3-205ENST00000486851 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms