RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 PLCH2O75038 1416 aa29.11■■■□□ 2.25
MCF2L-226ENST00000486210 SCAPERQ9BY12 1400 aa29.1■■■□□ 2.25
MCF2L-226ENST00000486210 MLECQ14165 292 aa29.07■■■□□ 2.24
MCF2L-226ENST00000486210 ARHGEF12Q9NZN5 1544 aa29.04■■■□□ 2.24
MCF2L-226ENST00000486210 MYO5CQ9NQX4 1742 aa29.03■■■□□ 2.24
MCF2L-226ENST00000486210 ATP10AO60312 1499 aa29■■■□□ 2.23
MCF2L-226ENST00000486210 C9orf84Q5VXU9 1444 aa28.99■■■□□ 2.23
MCF2L-226ENST00000486210 KIF14Q15058 1648 aa28.98■■■□□ 2.23
MCF2L-226ENST00000486210 PREX1Q8TCU6 1659 aa28.96■■■□□ 2.23
MCF2L-226ENST00000486210 CERKQ8TCT0 537 aa28.95■■■□□ 2.22
MCF2L-226ENST00000486210 ARHGAP35Q9NRY4 1499 aa28.94■■■□□ 2.22
MCF2L-226ENST00000486210 FMN1Q68DA7 1419 aa28.94■■■□□ 2.22
MCF2L-226ENST00000486210 EFCAB2Q5VUJ9 269 aa28.93■■■□□ 2.22
MCF2L-226ENST00000486210 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
MCF2L-226ENST00000486210 ATP1B4Q9UN42 357 aaPredicted RBP28.91■■■□□ 2.22
MCF2L-226ENST00000486210 KDM5CP41229 1560 aa28.91■■■□□ 2.22
MCF2L-226ENST00000486210 CEBPAP49715 358 aaPredicted RBP28.9■■■□□ 2.22
MCF2L-226ENST00000486210 ZNF518AQ6AHZ1 1483 aa28.89■■■□□ 2.22
MCF2L-226ENST00000486210 EHMT2Q96KQ7 1210 aa28.88■■■□□ 2.21
MCF2L-226ENST00000486210 STRCQ7RTU9 1775 aa28.88■■■□□ 2.21
MCF2L-226ENST00000486210 TROQ12816 1431 aaPredicted RBP28.86■■■□□ 2.21
MCF2L-226ENST00000486210 ARHGAP5Q13017 1502 aa28.85■■■□□ 2.21
MCF2L-226ENST00000486210 DIP2CQ9Y2E4 1556 aa28.85■■■□□ 2.21
MCF2L-226ENST00000486210 CDC42BPBQ9Y5S2 1711 aa28.84■■■□□ 2.21
MCF2L-226ENST00000486210 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
MCF2L-226ENST00000486210 AFAP1Q8N556 730 aa28.84■■■□□ 2.21
MCF2L-226ENST00000486210 CDK11AQ9UQ88 783 aaPredicted RBP28.84■■■□□ 2.21
MCF2L-226ENST00000486210 ABCA6Q8N139 1617 aa28.8■■■□□ 2.2
MCF2L-226ENST00000486210 REREQ9P2R6 1566 aa28.8■■■□□ 2.2
MCF2L-226ENST00000486210 SETD1BQ9UPS6 1966 aaKnown RBP28.78■■■□□ 2.2
MCF2L-226ENST00000486210 CLIP1P30622 1438 aa28.77■■■□□ 2.2
MCF2L-226ENST00000486210 C3P01024 1663 aa28.77■■■□□ 2.2
MCF2L-226ENST00000486210 UHRF1BP1Q6BDS2 1440 aa28.76■■■□□ 2.19
MCF2L-226ENST00000486210 MLH3Q9UHC1 1453 aa28.74■■■□□ 2.19
MCF2L-226ENST00000486210 PREX2Q70Z35 1606 aa28.74■■■□□ 2.19
MCF2L-226ENST00000486210 ITSN2Q9NZM3 1697 aa28.72■■■□□ 2.19
MCF2L-226ENST00000486210 ABCC1P33527 1531 aa28.72■■■□□ 2.19
MCF2L-226ENST00000486210 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
MCF2L-226ENST00000486210 MYT1LQ9UL68 1186 aa28.71■■■□□ 2.19
MCF2L-226ENST00000486210 AGLP35573 1532 aa28.7■■■□□ 2.19
MCF2L-226ENST00000486210 DMRT2Q9Y5R5 561 aa28.69■■■□□ 2.18
MCF2L-226ENST00000486210 KIDINS220Q9ULH0 1771 aa28.67■■■□□ 2.18
MCF2L-226ENST00000486210 CDC42BPAQ5VT25 1732 aa28.65■■■□□ 2.18
MCF2L-226ENST00000486210 PTPRTO14522 1441 aa28.63■■■□□ 2.17
MCF2L-226ENST00000486210 CASKIN1Q8WXD9 1431 aa28.6■■■□□ 2.17
MCF2L-226ENST00000486210 CCDC18Q5T9S5 1454 aa28.6■■■□□ 2.17
MCF2L-226ENST00000486210 LTBP4Q8N2S1 1624 aa28.58■■■□□ 2.17
MCF2L-226ENST00000486210 ILDR2Q71H61 639 aa28.56■■■□□ 2.16
MCF2L-226ENST00000486210 SAMD9LQ8IVG5 1584 aa28.55■■■□□ 2.16
MCF2L-226ENST00000486210 DISP3Q9P2K9 1392 aa28.54■■■□□ 2.16
MCF2L-226ENST00000486210 NCOA1Q15788 1441 aa28.53■■■□□ 2.16
MCF2L-226ENST00000486210 CNTLNQ9NXG0 1405 aa28.53■■■□□ 2.16
MCF2L-226ENST00000486210 ESF1Q9H501 851 aaKnown RBP28.53■■■□□ 2.16
MCF2L-226ENST00000486210 MROH2AA6NES4 1674 aa28.52■■■□□ 2.16
MCF2L-226ENST00000486210 SYCP2Q9BX26 1530 aa28.48■■■□□ 2.15
MCF2L-226ENST00000486210 SUPT6HQ7KZ85 1726 aaKnown RBP28.47■■■□□ 2.15
MCF2L-226ENST00000486210 CAMSAP1Q5T5Y3 1602 aa28.47■■■□□ 2.15
MCF2L-226ENST00000486210 FYCO1Q9BQS8 1478 aa28.46■■■□□ 2.15
MCF2L-226ENST00000486210 GPATCH8Q9UKJ3 1502 aaKnown RBP28.45■■■□□ 2.15
MCF2L-226ENST00000486210 NPATQ14207 1427 aa28.44■■■□□ 2.14
MCF2L-226ENST00000486210 ZNF777Q9ULD5 760 aaPredicted RBP28.44■■■□□ 2.14
MCF2L-226ENST00000486210 IQSEC2Q5JU85 1478 aa28.44■■■□□ 2.14
MCF2L-226ENST00000486210 SPATA31D1Q6ZQQ2 1576 aa28.43■■■□□ 2.14
MCF2L-226ENST00000486210 ZMYM3Q14202 1370 aa28.43■■■□□ 2.14
MCF2L-226ENST00000486210 CLTCQ00610 1675 aaKnown RBP28.42■■■□□ 2.14
MCF2L-226ENST00000486210 PLXNC1O60486 1568 aa28.41■■■□□ 2.14
MCF2L-226ENST00000486210 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
MCF2L-226ENST00000486210 ATP7AQ04656 1500 aa28.4■■■□□ 2.14
MCF2L-226ENST00000486210 HNRNPMP52272 730 aaKnown RBP eCLIP28.4■■■□□ 2.14
MCF2L-226ENST00000486210 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
MCF2L-226ENST00000486210 SOCS7O14512 581 aa28.39■■■□□ 2.14
MCF2L-226ENST00000486210 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
MCF2L-226ENST00000486210 ZNF142P52746 1687 aaPredicted RBP28.38■■■□□ 2.13
MCF2L-226ENST00000486210 MYO3AQ8NEV4 1616 aa28.37■■■□□ 2.13
MCF2L-226ENST00000486210 NCKAP5LQ9HCH0 1330 aa28.35■■■□□ 2.13
MCF2L-226ENST00000486210 KIAA1107Q9UPP5 1409 aa28.35■■■□□ 2.13
MCF2L-226ENST00000486210 A2MP01023 1474 aa28.34■■■□□ 2.13
MCF2L-226ENST00000486210 PTPRKQ15262 1439 aa28.31■■■□□ 2.12
MCF2L-226ENST00000486210 CEP170BQ9Y4F5 1589 aaPredicted RBP28.3■■■□□ 2.12
MCF2L-226ENST00000486210 PLEKHH2Q8IVE3 1493 aa28.3■■■□□ 2.12
MCF2L-226ENST00000486210 ZNF335Q9H4Z2 1342 aaPredicted RBP28.3■■■□□ 2.12
MCF2L-226ENST00000486210 PLA2R1Q13018 1463 aa28.29■■■□□ 2.12
MCF2L-226ENST00000486210 CFDP1Q9UEE9 299 aaPredicted RBP28.28■■■□□ 2.12
MCF2L-226ENST00000486210 TCOF1Q13428 1488 aaKnown RBP28.27■■■□□ 2.12
MCF2L-226ENST00000486210 ADGBQ8N7X0 1667 aa28.26■■■□□ 2.12
MCF2L-226ENST00000486210 CCNB3Q8WWL7 1395 aa28.25■■■□□ 2.11
MCF2L-226ENST00000486210 GGT6Q6P531 493 aa28.25■■■□□ 2.11
MCF2L-226ENST00000486210 PKD2Q13563 968 aa28.22■■■□□ 2.11
MCF2L-226ENST00000486210 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
MCF2L-226ENST00000486210 MBD5Q9P267 1494 aa28.19■■■□□ 2.1
MCF2L-226ENST00000486210 ZNF644Q9H582 1327 aaPredicted RBP28.18■■■□□ 2.1
MCF2L-226ENST00000486210 MTUS2Q5JR59 1369 aa28.18■■■□□ 2.1
MCF2L-226ENST00000486210 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
MCF2L-226ENST00000486210 UBAP1LF5GYI3 381 aa28.17■■■□□ 2.1
MCF2L-226ENST00000486210 PPP6R1Q9UPN7 881 aa28.15■■■□□ 2.1
MCF2L-226ENST00000486210 A2ML1A8K2U0 1454 aa28.15■■■□□ 2.1
MCF2L-226ENST00000486210 EHBP1L1Q8N3D4 1523 aa28.12■■■□□ 2.09
MCF2L-226ENST00000486210 RTEL1-TNFRSF6BF6WH68 1400 aa28.11■■■□□ 2.09
MCF2L-226ENST00000486210 POLR1AO95602 1720 aaPredicted RBP28.1■■■□□ 2.09
MCF2L-226ENST00000486210 NEURL4Q96JN8 1562 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms