RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
PATJ-207ENST00000484562 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
PATJ-207ENST00000484562 CLSTN1O94985 981 aa13.84□□□□□ -0.19
PATJ-207ENST00000484562 CCDC34Q96HJ3 373 aa13.82□□□□□ -0.2
PATJ-207ENST00000484562 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
PATJ-207ENST00000484562 TPM4P67936 248 aa13.81□□□□□ -0.2
PATJ-207ENST00000484562 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
PATJ-207ENST00000484562 RWDD1Q9H446 243 aaPredicted RBP13.81□□□□□ -0.2
PATJ-207ENST00000484562 SRPK2P78362 688 aaKnown RBP13.81□□□□□ -0.2
PATJ-207ENST00000484562 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
PATJ-207ENST00000484562 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
PATJ-207ENST00000484562 HDAC5Q9UQL6 1122 aa13.8□□□□□ -0.2
PATJ-207ENST00000484562 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
PATJ-207ENST00000484562 TCERG1O14776 1098 aaKnown RBP13.78□□□□□ -0.2
PATJ-207ENST00000484562 USP35Q9P2H5 1018 aa13.77□□□□□ -0.2
PATJ-207ENST00000484562 ISY1Q9ULR0 285 aaKnown RBP13.77□□□□□ -0.2
PATJ-207ENST00000484562 CSPP1Q1MSJ5 1256 aa13.77□□□□□ -0.21
PATJ-207ENST00000484562 NOC3LQ8WTT2 800 aaKnown RBP13.76□□□□□ -0.21
PATJ-207ENST00000484562 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
PATJ-207ENST00000484562 RALBP1Q15311 655 aa13.75□□□□□ -0.21
PATJ-207ENST00000484562 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
PATJ-207ENST00000484562 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
PATJ-207ENST00000484562 SPRYD3Q8NCJ5 442 aa13.74□□□□□ -0.21
PATJ-207ENST00000484562 GPATCH3Q96I76 525 aa13.74□□□□□ -0.21
PATJ-207ENST00000484562 RBM19Q9Y4C8 960 aaKnown RBP13.73□□□□□ -0.21
PATJ-207ENST00000484562 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
PATJ-207ENST00000484562 GOLGA6L1Q8N7Z2 621 aa13.72□□□□□ -0.21
PATJ-207ENST00000484562 HMMRO75330 724 aa13.72□□□□□ -0.21
PATJ-207ENST00000484562 ITPRIPQ8IWB1 547 aa13.71□□□□□ -0.21
PATJ-207ENST00000484562 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
PATJ-207ENST00000484562 SETD5Q9C0A6 1442 aa13.7□□□□□ -0.22
PATJ-207ENST00000484562 STK31Q9BXU1 1019 aa13.7□□□□□ -0.22
PATJ-207ENST00000484562 GOLGA6L3A6NEY3 463 aa13.7□□□□□ -0.22
PATJ-207ENST00000484562 SPAG9O60271 1321 aaKnown RBP13.7□□□□□ -0.22
PATJ-207ENST00000484562 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
PATJ-207ENST00000484562 SOX12O15370 315 aa13.69□□□□□ -0.22
PATJ-207ENST00000484562 TNNT3P45378 269 aaPredicted RBP13.69□□□□□ -0.22
PATJ-207ENST00000484562 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
PATJ-207ENST00000484562 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
PATJ-207ENST00000484562 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
PATJ-207ENST00000484562 APBB1O00213 710 aa13.68□□□□□ -0.22
PATJ-207ENST00000484562 KIF3AQ9Y496 699 aa13.68□□□□□ -0.22
PATJ-207ENST00000484562 PHF14O94880 888 aa13.68□□□□□ -0.22
PATJ-207ENST00000484562 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
PATJ-207ENST00000484562 GORABQ5T7V8 394 aa13.67□□□□□ -0.22
PATJ-207ENST00000484562 ARHGAP35Q9NRY4 1499 aa13.66□□□□□ -0.22
PATJ-207ENST00000484562 CHMP4CQ96CF2 233 aa13.65□□□□□ -0.22
PATJ-207ENST00000484562 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
PATJ-207ENST00000484562 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.22
PATJ-207ENST00000484562 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.23
PATJ-207ENST00000484562 PDE3BQ13370 1112 aa13.64□□□□□ -0.23
PATJ-207ENST00000484562 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
PATJ-207ENST00000484562 TPM3P06753 285 aa13.64□□□□□ -0.23
PATJ-207ENST00000484562 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
PATJ-207ENST00000484562 PKD2Q13563 968 aa13.64□□□□□ -0.23
PATJ-207ENST00000484562 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
PATJ-207ENST00000484562 ROCK2O75116 1388 aaKnown RBP13.64□□□□□ -0.23
PATJ-207ENST00000484562 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
PATJ-207ENST00000484562 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
PATJ-207ENST00000484562 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.23
PATJ-207ENST00000484562 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
PATJ-207ENST00000484562 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
PATJ-207ENST00000484562 TAF7LQ5H9L4 462 aa13.62□□□□□ -0.23
PATJ-207ENST00000484562 ST18O60284 1047 aa13.62□□□□□ -0.23
PATJ-207ENST00000484562 MFAP1P55081 439 aaKnown RBP13.62□□□□□ -0.23
PATJ-207ENST00000484562 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
PATJ-207ENST00000484562 RASSF8Q8NHQ8 419 aa13.62□□□□□ -0.23
PATJ-207ENST00000484562 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
PATJ-207ENST00000484562 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
PATJ-207ENST00000484562 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
PATJ-207ENST00000484562 PHLDB1Q86UU1 1377 aa13.61□□□□□ -0.23
PATJ-207ENST00000484562 STK26Q9P289 416 aa13.61□□□□□ -0.23
PATJ-207ENST00000484562 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
PATJ-207ENST00000484562 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
PATJ-207ENST00000484562 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
PATJ-207ENST00000484562 MLECQ14165 292 aa13.59□□□□□ -0.23
PATJ-207ENST00000484562 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
PATJ-207ENST00000484562 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
PATJ-207ENST00000484562 GGT6Q6P531 493 aa13.59□□□□□ -0.23
PATJ-207ENST00000484562 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.24
PATJ-207ENST00000484562 CARMIL2Q6F5E8 1435 aa13.58□□□□□ -0.24
PATJ-207ENST00000484562 CENPJQ9HC77 1338 aaPredicted RBP13.58□□□□□ -0.24
PATJ-207ENST00000484562 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
PATJ-207ENST00000484562 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
PATJ-207ENST00000484562 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
PATJ-207ENST00000484562 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
PATJ-207ENST00000484562 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
PATJ-207ENST00000484562 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
PATJ-207ENST00000484562 PRM3Q9NNZ6 103 aa13.56□□□□□ -0.24
PATJ-207ENST00000484562 NACADO15069 1562 aa13.55□□□□□ -0.24
PATJ-207ENST00000484562 CUX2O14529 1486 aa13.55□□□□□ -0.24
PATJ-207ENST00000484562 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
PATJ-207ENST00000484562 SKOR2Q2VWA4 1001 aaPredicted RBP13.55□□□□□ -0.24
PATJ-207ENST00000484562 NUP155O75694 1391 aa13.54□□□□□ -0.24
PATJ-207ENST00000484562 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
PATJ-207ENST00000484562 EFCAB2Q5VUJ9 269 aa13.54□□□□□ -0.24
PATJ-207ENST00000484562 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
PATJ-207ENST00000484562 MARCH6O60337 910 aa13.53□□□□□ -0.24
PATJ-207ENST00000484562 G3V3G9 751 aa13.53□□□□□ -0.24
PATJ-207ENST00000484562 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms