RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 NLRP6P59044 892 aa10.71□□□□□ -0.69
SPTA1-206ENST00000484520 TAOK2Q9UL54 1235 aa10.7□□□□□ -0.7
SPTA1-206ENST00000484520 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
SPTA1-206ENST00000484520 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
SPTA1-206ENST00000484520 FBXO22Q8NEZ5 403 aa10.68□□□□□ -0.7
SPTA1-206ENST00000484520 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
SPTA1-206ENST00000484520 GPR153Q6NV75 609 aa10.67□□□□□ -0.7
SPTA1-206ENST00000484520 ECM2O94769 699 aaPredicted RBP10.66□□□□□ -0.7
SPTA1-206ENST00000484520 STK25O00506 426 aa10.65□□□□□ -0.7
SPTA1-206ENST00000484520 MFRPQ9BY79 579 aa10.65□□□□□ -0.7
SPTA1-206ENST00000484520 ARSIQ5FYB1 569 aa10.62□□□□□ -0.71
SPTA1-206ENST00000484520 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
SPTA1-206ENST00000484520 KHSRPQ92945 711 aaKnown RBP eCLIP10.59□□□□□ -0.71
SPTA1-206ENST00000484520 RGL2O15211 777 aa10.58□□□□□ -0.72
SPTA1-206ENST00000484520 PKD2Q13563 968 aa10.58□□□□□ -0.72
SPTA1-206ENST00000484520 C2orf72A6NCS6 295 aa10.55□□□□□ -0.72
SPTA1-206ENST00000484520 KIF3CO14782 793 aa10.54□□□□□ -0.72
SPTA1-206ENST00000484520 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
SPTA1-206ENST00000484520 RNF166Q96A37 237 aaPredicted RBP10.53□□□□□ -0.72
SPTA1-206ENST00000484520 MYT1LQ9UL68 1186 aa10.51□□□□□ -0.73
SPTA1-206ENST00000484520 NUDT7P0C024 238 aa10.48□□□□□ -0.73
SPTA1-206ENST00000484520 ANKRD13DQ6ZTN6 518 aa10.47□□□□□ -0.73
SPTA1-206ENST00000484520 PPP1R37O75864 691 aa10.46□□□□□ -0.73
SPTA1-206ENST00000484520 TMC2Q8TDI7 906 aa10.46□□□□□ -0.73
SPTA1-206ENST00000484520 PCDHGA4Q9Y5G9 962 aa10.44□□□□□ -0.74
SPTA1-206ENST00000484520 SLC34A2O95436 690 aa10.43□□□□□ -0.74
SPTA1-206ENST00000484520 LHX6Q9UPM6 363 aa10.43□□□□□ -0.74
SPTA1-206ENST00000484520 PTGER2P43116 358 aa10.42□□□□□ -0.74
SPTA1-206ENST00000484520 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
SPTA1-206ENST00000484520 POTEEQ6S8J3 1075 aa10.38□□□□□ -0.75
SPTA1-206ENST00000484520 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
SPTA1-206ENST00000484520 PBX2P40425 430 aa10.37□□□□□ -0.75
SPTA1-206ENST00000484520 HS6ST3Q8IZP7 471 aa10.33□□□□□ -0.76
SPTA1-206ENST00000484520 FOXK1P85037 733 aa10.31□□□□□ -0.76
SPTA1-206ENST00000484520 PLPP6Q8IY26 295 aa10.31□□□□□ -0.76
SPTA1-206ENST00000484520 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
SPTA1-206ENST00000484520 KDM4FA0A1W2PPD8 638 aa10.3□□□□□ -0.76
SPTA1-206ENST00000484520 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
SPTA1-206ENST00000484520 CHGAP10645 457 aaKnown RBP10.29□□□□□ -0.76
SPTA1-206ENST00000484520 PSDA5PKW4 1024 aaPredicted RBP10.28□□□□□ -0.76
SPTA1-206ENST00000484520 ARHGAP33O14559 1287 aa10.28□□□□□ -0.76
SPTA1-206ENST00000484520 DSG2Q14126 1118 aa10.28□□□□□ -0.76
SPTA1-206ENST00000484520 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
SPTA1-206ENST00000484520 PSEN2P49810 448 aa10.23□□□□□ -0.77
SPTA1-206ENST00000484520 TBC1D12O60347 775 aa10.22□□□□□ -0.77
SPTA1-206ENST00000484520 NKX1-1Q15270 411 aaPredicted RBP10.22□□□□□ -0.77
SPTA1-206ENST00000484520 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
SPTA1-206ENST00000484520 PPP4R3BQ5MIZ7 849 aa10.2□□□□□ -0.78
SPTA1-206ENST00000484520 TK2O00142 265 aa10.19□□□□□ -0.78
SPTA1-206ENST00000484520 DNAJC5Q9H3Z4 198 aa10.18□□□□□ -0.78
SPTA1-206ENST00000484520 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
SPTA1-206ENST00000484520 HRO43593 1189 aa10.17□□□□□ -0.78
SPTA1-206ENST00000484520 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
SPTA1-206ENST00000484520 OXER1Q8TDS5 423 aa10.15□□□□□ -0.78
SPTA1-206ENST00000484520 RYDENQ9NUL5 291 aaKnown RBP10.15□□□□□ -0.78
SPTA1-206ENST00000484520 PLA2G2EQ9NZK7 142 aa10.15□□□□□ -0.78
SPTA1-206ENST00000484520 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
SPTA1-206ENST00000484520 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
SPTA1-206ENST00000484520 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
SPTA1-206ENST00000484520 KCNH8Q96L42 1107 aa10.11□□□□□ -0.79
SPTA1-206ENST00000484520 STAC3Q96MF2 364 aa10.11□□□□□ -0.79
SPTA1-206ENST00000484520 ZNF454Q8N9F8 522 aa10.1□□□□□ -0.79
SPTA1-206ENST00000484520 KCTD12Q96CX2 325 aaKnown RBP10.1□□□□□ -0.79
SPTA1-206ENST00000484520 NCKAP5LQ9HCH0 1330 aa10.08□□□□□ -0.8
SPTA1-206ENST00000484520 PDE4AP27815 886 aa10.08□□□□□ -0.8
SPTA1-206ENST00000484520 VPS9D1Q9Y2B5 631 aa10.07□□□□□ -0.8
SPTA1-206ENST00000484520 BCL2L12Q9HB09 334 aa10.06□□□□□ -0.8
SPTA1-206ENST00000484520 GTPBP6O43824 516 aaPredicted RBP10.05□□□□□ -0.8
SPTA1-206ENST00000484520 FOSBP53539 338 aa10.04□□□□□ -0.8
SPTA1-206ENST00000484520 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
SPTA1-206ENST00000484520 EVI5O60447 810 aa10.02□□□□□ -0.81
SPTA1-206ENST00000484520 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
SPTA1-206ENST00000484520 PTPREP23469 700 aa10.01□□□□□ -0.81
SPTA1-206ENST00000484520 PTPN5P54829 565 aa10.01□□□□□ -0.81
SPTA1-206ENST00000484520 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
SPTA1-206ENST00000484520 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
SPTA1-206ENST00000484520 JPH4Q96JJ6 628 aa9.99□□□□□ -0.81
SPTA1-206ENST00000484520 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
SPTA1-206ENST00000484520 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
SPTA1-206ENST00000484520 ZBED2Q9BTP6 218 aa9.98□□□□□ -0.81
SPTA1-206ENST00000484520 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
SPTA1-206ENST00000484520 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
SPTA1-206ENST00000484520 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
SPTA1-206ENST00000484520 MFSD10Q14728 455 aa9.96□□□□□ -0.82
SPTA1-206ENST00000484520 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
SPTA1-206ENST00000484520 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
SPTA1-206ENST00000484520 THSD4Q6ZMP0 1018 aa9.93□□□□□ -0.82
SPTA1-206ENST00000484520 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
SPTA1-206ENST00000484520 WNT2BQ93097 391 aa9.92□□□□□ -0.82
SPTA1-206ENST00000484520 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
SPTA1-206ENST00000484520 NBPF3Q9H094 633 aa9.9□□□□□ -0.82
SPTA1-206ENST00000484520 PCDHGA10Q9Y5H3 936 aa9.9□□□□□ -0.82
SPTA1-206ENST00000484520 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
SPTA1-206ENST00000484520 COL9A1P20849 921 aa9.86□□□□□ -0.83
SPTA1-206ENST00000484520 PROX2Q3B8N5 592 aa9.86□□□□□ -0.83
SPTA1-206ENST00000484520 IFFO2Q5TF58 517 aa9.84□□□□□ -0.83
SPTA1-206ENST00000484520 TYW1BQ6NUM6 668 aa9.84□□□□□ -0.83
SPTA1-206ENST00000484520 RABGEF1Q9UJ41 708 aa9.84□□□□□ -0.83
SPTA1-206ENST00000484520 PHF14O94880 888 aa9.83□□□□□ -0.84
SPTA1-206ENST00000484520 FBXW7Q969H0 707 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms