RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 ARID3CA6NKF2 412 aa20.48■□□□□ 0.87
ABCD4-212ENST00000484380 ADGBQ8N7X0 1667 aa20.47■□□□□ 0.87
ABCD4-212ENST00000484380 CROCC2H7BZ55 1655 aa20.47■□□□□ 0.87
ABCD4-212ENST00000484380 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-212ENST00000484380 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
ABCD4-212ENST00000484380 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-212ENST00000484380 GPATCH8Q9UKJ3 1502 aaKnown RBP20.46■□□□□ 0.87
ABCD4-212ENST00000484380 CAMSAP2Q08AD1 1489 aa20.45■□□□□ 0.86
ABCD4-212ENST00000484380 TONSLQ96HA7 1378 aa20.43■□□□□ 0.86
ABCD4-212ENST00000484380 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
ABCD4-212ENST00000484380 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
ABCD4-212ENST00000484380 CDC42BPAQ5VT25 1732 aa20.42■□□□□ 0.86
ABCD4-212ENST00000484380 CHIC2Q9UKJ5 165 aa20.41■□□□□ 0.86
ABCD4-212ENST00000484380 ATP10BO94823 1461 aa20.41■□□□□ 0.86
ABCD4-212ENST00000484380 ADGRL2O95490 1459 aa20.41■□□□□ 0.86
ABCD4-212ENST00000484380 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
ABCD4-212ENST00000484380 ZNF644Q9H582 1327 aaPredicted RBP20.34■□□□□ 0.85
ABCD4-212ENST00000484380 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
ABCD4-212ENST00000484380 CFDP1Q9UEE9 299 aaPredicted RBP20.34■□□□□ 0.85
ABCD4-212ENST00000484380 PTPRGP23470 1445 aa20.33■□□□□ 0.84
ABCD4-212ENST00000484380 NCOA1Q15788 1441 aa20.31■□□□□ 0.84
ABCD4-212ENST00000484380 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
ABCD4-212ENST00000484380 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
ABCD4-212ENST00000484380 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
ABCD4-212ENST00000484380 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
ABCD4-212ENST00000484380 PREX2Q70Z35 1606 aa20.28■□□□□ 0.84
ABCD4-212ENST00000484380 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
ABCD4-212ENST00000484380 RPRD2Q5VT52 1461 aaKnown RBP20.25■□□□□ 0.83
ABCD4-212ENST00000484380 ANKRD30BQ9BXX2 1392 aa20.25■□□□□ 0.83
ABCD4-212ENST00000484380 CLASP1Q7Z460 1538 aa20.25■□□□□ 0.83
ABCD4-212ENST00000484380 PZPP20742 1482 aa20.25■□□□□ 0.83
ABCD4-212ENST00000484380 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
ABCD4-212ENST00000484380 ABCC2Q92887 1545 aa20.23■□□□□ 0.83
ABCD4-212ENST00000484380 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
ABCD4-212ENST00000484380 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
ABCD4-212ENST00000484380 TEX14Q8IWB6 1497 aa20.21■□□□□ 0.83
ABCD4-212ENST00000484380 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
ABCD4-212ENST00000484380 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
ABCD4-212ENST00000484380 SAMD9LQ8IVG5 1584 aa20.19■□□□□ 0.82
ABCD4-212ENST00000484380 ERCC6L2Q5T890 1561 aa20.18■□□□□ 0.82
ABCD4-212ENST00000484380 ANKRD50Q9ULJ7 1429 aa20.17■□□□□ 0.82
ABCD4-212ENST00000484380 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
ABCD4-212ENST00000484380 ADRA2BP18089 450 aa20.16■□□□□ 0.82
ABCD4-212ENST00000484380 ZNF777Q9ULD5 760 aaPredicted RBP20.16■□□□□ 0.82
ABCD4-212ENST00000484380 TTC37Q6PGP7 1564 aa20.15■□□□□ 0.82
ABCD4-212ENST00000484380 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
ABCD4-212ENST00000484380 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
ABCD4-212ENST00000484380 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
ABCD4-212ENST00000484380 KIAA1107Q9UPP5 1409 aa20.14■□□□□ 0.81
ABCD4-212ENST00000484380 UHRF1BP1LA0JNW5 1464 aa20.14■□□□□ 0.81
ABCD4-212ENST00000484380 CCDC141Q6ZP82 1450 aa20.14■□□□□ 0.81
ABCD4-212ENST00000484380 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
ABCD4-212ENST00000484380 MYO5CQ9NQX4 1742 aa20.13■□□□□ 0.81
ABCD4-212ENST00000484380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
ABCD4-212ENST00000484380 L3MBTL2Q969R5 705 aa20.1■□□□□ 0.81
ABCD4-212ENST00000484380 FOXD1Q16676 465 aa20.09■□□□□ 0.81
ABCD4-212ENST00000484380 ZCCHC11Q5TAX3 1644 aaKnown RBP20.09■□□□□ 0.81
ABCD4-212ENST00000484380 KCNA4P22459 653 aa20.09■□□□□ 0.81
ABCD4-212ENST00000484380 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.8
ABCD4-212ENST00000484380 PLEKHH2Q8IVE3 1493 aa20.07■□□□□ 0.8
ABCD4-212ENST00000484380 HIRIP3Q9BW71 556 aaPredicted RBP20.06■□□□□ 0.8
ABCD4-212ENST00000484380 POLR1AO95602 1720 aaPredicted RBP20.06■□□□□ 0.8
ABCD4-212ENST00000484380 PLXNC1O60486 1568 aa20.06■□□□□ 0.8
ABCD4-212ENST00000484380 TSPY4P0CV99 314 aa20.06■□□□□ 0.8
ABCD4-212ENST00000484380 TSPY10P0CW01 314 aa20.06■□□□□ 0.8
ABCD4-212ENST00000484380 KIF15Q9NS87 1388 aa20.06■□□□□ 0.8
ABCD4-212ENST00000484380 ARHGAP5Q13017 1502 aa20.05■□□□□ 0.8
ABCD4-212ENST00000484380 SYCP2Q9BX26 1530 aa20.05■□□□□ 0.8
ABCD4-212ENST00000484380 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
ABCD4-212ENST00000484380 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
ABCD4-212ENST00000484380 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
ABCD4-212ENST00000484380 UNC13BO14795 1591 aa20.02■□□□□ 0.8
ABCD4-212ENST00000484380 HNRNPMP52272 730 aaKnown RBP eCLIP20■□□□□ 0.79
ABCD4-212ENST00000484380 ARHGEF12Q9NZN5 1544 aa20■□□□□ 0.79
ABCD4-212ENST00000484380 ANP32CO43423 234 aa19.99■□□□□ 0.79
ABCD4-212ENST00000484380 NUP155O75694 1391 aa19.99■□□□□ 0.79
ABCD4-212ENST00000484380 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
ABCD4-212ENST00000484380 ARAP3Q8WWN8 1544 aa19.98■□□□□ 0.79
ABCD4-212ENST00000484380 PKD2Q13563 968 aa19.98■□□□□ 0.79
ABCD4-212ENST00000484380 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
ABCD4-212ENST00000484380 PLCH2O75038 1416 aa19.97■□□□□ 0.79
ABCD4-212ENST00000484380 WASHC2AQ641Q2 1341 aa19.96■□□□□ 0.79
ABCD4-212ENST00000484380 FAM135AQ9P2D6 1515 aa19.96■□□□□ 0.79
ABCD4-212ENST00000484380 ABCC1P33527 1531 aa19.95■□□□□ 0.78
ABCD4-212ENST00000484380 UHRF1BP1Q6BDS2 1440 aa19.95■□□□□ 0.78
ABCD4-212ENST00000484380 KCNH8Q96L42 1107 aa19.95■□□□□ 0.78
ABCD4-212ENST00000484380 CNTLNQ9NXG0 1405 aa19.93■□□□□ 0.78
ABCD4-212ENST00000484380 IQGAP3Q86VI3 1631 aa19.93■□□□□ 0.78
ABCD4-212ENST00000484380 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
ABCD4-212ENST00000484380 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
ABCD4-212ENST00000484380 CCDC7Q96M83 1385 aa19.91■□□□□ 0.78
ABCD4-212ENST00000484380 RALGAPBQ86X10 1494 aa19.9■□□□□ 0.78
ABCD4-212ENST00000484380 ERBINQ96RT1 1412 aa19.89■□□□□ 0.77
ABCD4-212ENST00000484380 KDM5CP41229 1560 aa19.89■□□□□ 0.77
ABCD4-212ENST00000484380 WDR7Q9Y4E6 1490 aa19.84■□□□□ 0.77
ABCD4-212ENST00000484380 ABCA9Q8IUA7 1624 aa19.84■□□□□ 0.77
ABCD4-212ENST00000484380 EFCAB2Q5VUJ9 269 aa19.84■□□□□ 0.77
ABCD4-212ENST00000484380 ATP10AO60312 1499 aa19.81■□□□□ 0.76
ABCD4-212ENST00000484380 RTEL1-TNFRSF6BF6WH68 1400 aa19.81■□□□□ 0.76
ABCD4-212ENST00000484380 C11orf95C9JLR9 678 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms