RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
ATG4B-220ENST00000482507 ADCY10Q96PN6 1610 aa21.13■□□□□ 0.97
ATG4B-220ENST00000482507 SUPT6HQ7KZ85 1726 aaKnown RBP21.13■□□□□ 0.97
ATG4B-220ENST00000482507 UHRF1BP1LA0JNW5 1464 aa21.12■□□□□ 0.97
ATG4B-220ENST00000482507 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
ATG4B-220ENST00000482507 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
ATG4B-220ENST00000482507 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
ATG4B-220ENST00000482507 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
ATG4B-220ENST00000482507 NPM1P06748 294 aaKnown RBP eCLIP21.1■□□□□ 0.97
ATG4B-220ENST00000482507 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
ATG4B-220ENST00000482507 KIF14Q15058 1648 aa21.06■□□□□ 0.96
ATG4B-220ENST00000482507 ZNF644Q9H582 1327 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-220ENST00000482507 ZCCHC11Q5TAX3 1644 aaKnown RBP21.05■□□□□ 0.96
ATG4B-220ENST00000482507 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-220ENST00000482507 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
ATG4B-220ENST00000482507 DENND4BO75064 1496 aaPredicted RBP21.02■□□□□ 0.95
ATG4B-220ENST00000482507 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
ATG4B-220ENST00000482507 CFDP1Q9UEE9 299 aaPredicted RBP21.01■□□□□ 0.95
ATG4B-220ENST00000482507 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
ATG4B-220ENST00000482507 CCER2I3L3R5 266 aa21■□□□□ 0.95
ATG4B-220ENST00000482507 KDM6BO15054 1643 aa20.99■□□□□ 0.95
ATG4B-220ENST00000482507 ASXL2Q76L83 1435 aa20.99■□□□□ 0.95
ATG4B-220ENST00000482507 ANP32CO43423 234 aa20.98■□□□□ 0.95
ATG4B-220ENST00000482507 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
ATG4B-220ENST00000482507 TSHZ2Q9NRE2 1034 aa20.96■□□□□ 0.95
ATG4B-220ENST00000482507 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
ATG4B-220ENST00000482507 GCC2Q8IWJ2 1684 aa20.95■□□□□ 0.94
ATG4B-220ENST00000482507 TRIM52Q96A61 297 aa20.94■□□□□ 0.94
ATG4B-220ENST00000482507 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
ATG4B-220ENST00000482507 BCANQ96GW7 911 aa20.93■□□□□ 0.94
ATG4B-220ENST00000482507 FKBP8Q14318 412 aa20.92■□□□□ 0.94
ATG4B-220ENST00000482507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.91■□□□□ 0.94
ATG4B-220ENST00000482507 AKNAQ7Z591 1439 aa20.9■□□□□ 0.94
ATG4B-220ENST00000482507 MIA2Q96PC5 1412 aa20.89■□□□□ 0.93
ATG4B-220ENST00000482507 TTC37Q6PGP7 1564 aa20.88■□□□□ 0.93
ATG4B-220ENST00000482507 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.931e-6■■■■□ 21.8
ATG4B-220ENST00000482507 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
ATG4B-220ENST00000482507 HSPA5P11021 654 aaKnown RBP20.85■□□□□ 0.93
ATG4B-220ENST00000482507 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
ATG4B-220ENST00000482507 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
ATG4B-220ENST00000482507 MYT1Q01538 1121 aa20.84■□□□□ 0.93
ATG4B-220ENST00000482507 FOXD1Q16676 465 aa20.84■□□□□ 0.93
ATG4B-220ENST00000482507 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
ATG4B-220ENST00000482507 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
ATG4B-220ENST00000482507 PLCH2O75038 1416 aa20.8■□□□□ 0.92
ATG4B-220ENST00000482507 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
ATG4B-220ENST00000482507 FAM69CQ0P6D2 419 aa20.79■□□□□ 0.92
ATG4B-220ENST00000482507 L3MBTL2Q969R5 705 aa20.79■□□□□ 0.92
ATG4B-220ENST00000482507 EFCAB2Q5VUJ9 269 aa20.78■□□□□ 0.92
ATG4B-220ENST00000482507 DAPK1P53355 1430 aa20.78■□□□□ 0.92
ATG4B-220ENST00000482507 ABCC5O15440 1437 aa20.76■□□□□ 0.91
ATG4B-220ENST00000482507 CDC42BPBQ9Y5S2 1711 aa20.76■□□□□ 0.91
ATG4B-220ENST00000482507 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
ATG4B-220ENST00000482507 C11orf95C9JLR9 678 aaPredicted RBP20.74■□□□□ 0.91
ATG4B-220ENST00000482507 ROCK1Q13464 1354 aa20.74■□□□□ 0.91
ATG4B-220ENST00000482507 EIF4G2P78344 907 aaKnown RBP eCLIP20.74■□□□□ 0.91
ATG4B-220ENST00000482507 CD109Q6YHK3 1445 aa20.74■□□□□ 0.91
ATG4B-220ENST00000482507 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
ATG4B-220ENST00000482507 DNMT1P26358 1616 aaKnown RBP20.73■□□□□ 0.91
ATG4B-220ENST00000482507 PREX2Q70Z35 1606 aa20.73■□□□□ 0.91
ATG4B-220ENST00000482507 NEFLP07196 543 aa20.72■□□□□ 0.91
ATG4B-220ENST00000482507 SAMD9LQ8IVG5 1584 aa20.71■□□□□ 0.91
ATG4B-220ENST00000482507 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
ATG4B-220ENST00000482507 AFAP1Q8N556 730 aa20.7■□□□□ 0.91
ATG4B-220ENST00000482507 RPRD2Q5VT52 1461 aaKnown RBP20.7■□□□□ 0.9
ATG4B-220ENST00000482507 ABCA9Q8IUA7 1624 aa20.7■□□□□ 0.9
ATG4B-220ENST00000482507 TSPY4P0CV99 314 aa20.69■□□□□ 0.9
ATG4B-220ENST00000482507 TSPY10P0CW01 314 aa20.69■□□□□ 0.9
ATG4B-220ENST00000482507 MYO5CQ9NQX4 1742 aa20.69■□□□□ 0.9
ATG4B-220ENST00000482507 TEX14Q8IWB6 1497 aa20.69■□□□□ 0.9
ATG4B-220ENST00000482507 MBD5Q9P267 1494 aa20.69■□□□□ 0.9
ATG4B-220ENST00000482507 HNRNPUQ00839 825 aaKnown RBP eCLIP20.69■□□□□ 0.9
ATG4B-220ENST00000482507 FANCAO15360 1455 aa20.69■□□□□ 0.9
ATG4B-220ENST00000482507 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
ATG4B-220ENST00000482507 CNTLNQ9NXG0 1405 aa20.68■□□□□ 0.9
ATG4B-220ENST00000482507 CCDC184Q52MB2 194 aa20.68■□□□□ 0.9
ATG4B-220ENST00000482507 NCOA1Q15788 1441 aa20.67■□□□□ 0.9
ATG4B-220ENST00000482507 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
ATG4B-220ENST00000482507 CCDC7Q96M83 1385 aa20.65■□□□□ 0.9
ATG4B-220ENST00000482507 TRAPPC8Q9Y2L5 1435 aa20.64■□□□□ 0.9
ATG4B-220ENST00000482507 SLC4A1APQ9BWU0 796 aaKnown RBP20.63■□□□□ 0.89
ATG4B-220ENST00000482507 SCAPERQ9BY12 1400 aa20.62■□□□□ 0.89
ATG4B-220ENST00000482507 PZPP20742 1482 aa20.61■□□□□ 0.89
ATG4B-220ENST00000482507 MYT1LQ9UL68 1186 aa20.61■□□□□ 0.89
ATG4B-220ENST00000482507 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
ATG4B-220ENST00000482507 RSPH4AQ5TD94 716 aa20.61■□□□□ 0.89
ATG4B-220ENST00000482507 C9orf84Q5VXU9 1444 aa20.6■□□□□ 0.89
ATG4B-220ENST00000482507 KIAA1107Q9UPP5 1409 aa20.6■□□□□ 0.89
ATG4B-220ENST00000482507 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
ATG4B-220ENST00000482507 ADGRL1O94910 1474 aa20.59■□□□□ 0.89
ATG4B-220ENST00000482507 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-220ENST00000482507 CCDC141Q6ZP82 1450 aa20.59■□□□□ 0.89
ATG4B-220ENST00000482507 PRKRIP1Q9H875 184 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-220ENST00000482507 DIP2BQ9P265 1576 aa20.58■□□□□ 0.89
ATG4B-220ENST00000482507 KIF7Q2M1P5 1343 aa20.57■□□□□ 0.88
ATG4B-220ENST00000482507 PLEKHH2Q8IVE3 1493 aa20.57■□□□□ 0.88
ATG4B-220ENST00000482507 ANKRD30AQ9BXX3 1397 aa20.56■□□□□ 0.88
ATG4B-220ENST00000482507 ARAP3Q8WWN8 1544 aa20.56■□□□□ 0.88
ATG4B-220ENST00000482507 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
ATG4B-220ENST00000482507 ABCC1P33527 1531 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms