RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PLCH2O75038 1416 aa14.75□□□□□ -0.05
VCP-206ENST00000480327 ARID4BQ4LE39 1312 aaPredicted RBP14.75□□□□□ -0.05
VCP-206ENST00000480327 POGZQ7Z3K3 1410 aa14.75□□□□□ -0.05
VCP-206ENST00000480327 MAGI2Q86UL8 1455 aa14.73□□□□□ -0.05
VCP-206ENST00000480327 CDC42BPBQ9Y5S2 1711 aa14.72□□□□□ -0.05
VCP-206ENST00000480327 SCAPERQ9BY12 1400 aa14.72□□□□□ -0.05
VCP-206ENST00000480327 FMN1Q68DA7 1419 aa14.7□□□□□ -0.06
VCP-206ENST00000480327 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
VCP-206ENST00000480327 ARHGEF12Q9NZN5 1544 aa14.7□□□□□ -0.06
VCP-206ENST00000480327 KDM5CP41229 1560 aa14.68□□□□□ -0.06
VCP-206ENST00000480327 FBXO41Q8TF61 875 aa14.68□□□□□ -0.06
VCP-206ENST00000480327 ATP10AO60312 1499 aa14.67□□□□□ -0.06
VCP-206ENST00000480327 TROQ12816 1431 aaPredicted RBP14.66□□□□□ -0.06
VCP-206ENST00000480327 HSPA2P54652 639 aa14.66□□□□□ -0.06
VCP-206ENST00000480327 PREX1Q8TCU6 1659 aa14.65□□□□□ -0.06
VCP-206ENST00000480327 DIP2CQ9Y2E4 1556 aa14.65□□□□□ -0.06
VCP-206ENST00000480327 PREX2Q70Z35 1606 aa14.65□□□□□ -0.06
VCP-206ENST00000480327 ABCA6Q8N139 1617 aa14.65□□□□□ -0.06
VCP-206ENST00000480327 C9orf84Q5VXU9 1444 aa14.65□□□□□ -0.06
VCP-206ENST00000480327 CDC42BPAQ5VT25 1732 aa14.64□□□□□ -0.07
VCP-206ENST00000480327 MLECQ14165 292 aa14.64□□□□□ -0.07
VCP-206ENST00000480327 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
VCP-206ENST00000480327 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
VCP-206ENST00000480327 ARHGAP5Q13017 1502 aa14.64□□□□□ -0.07
VCP-206ENST00000480327 ITSN2Q9NZM3 1697 aa14.64□□□□□ -0.07
VCP-206ENST00000480327 STRCQ7RTU9 1775 aa14.63□□□□□ -0.07
VCP-206ENST00000480327 EFCAB2Q5VUJ9 269 aa14.63□□□□□ -0.07
VCP-206ENST00000480327 ZNF518AQ6AHZ1 1483 aa14.62□□□□□ -0.07
VCP-206ENST00000480327 REREQ9P2R6 1566 aa14.61□□□□□ -0.07
VCP-206ENST00000480327 ABCC1P33527 1531 aa14.61□□□□□ -0.07
VCP-206ENST00000480327 KIDINS220Q9ULH0 1771 aa14.6□□□□□ -0.07
VCP-206ENST00000480327 AFAP1Q8N556 730 aa14.6□□□□□ -0.07
VCP-206ENST00000480327 C3P01024 1663 aa14.6□□□□□ -0.07
VCP-206ENST00000480327 CDK11AQ9UQ88 783 aaPredicted RBP14.58□□□□□ -0.08
VCP-206ENST00000480327 CLIP1P30622 1438 aa14.58□□□□□ -0.08
VCP-206ENST00000480327 CASKIN1Q8WXD9 1431 aa14.58□□□□□ -0.08
VCP-206ENST00000480327 TRAPPC8Q9Y2L5 1435 aa14.58□□□□□ -0.08
VCP-206ENST00000480327 MLH3Q9UHC1 1453 aa14.57□□□□□ -0.08
VCP-206ENST00000480327 SETD1BQ9UPS6 1966 aaKnown RBP14.57□□□□□ -0.08
VCP-206ENST00000480327 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
VCP-206ENST00000480327 CCDC18Q5T9S5 1454 aa14.56□□□□□ -0.08
VCP-206ENST00000480327 AGLP35573 1532 aa14.54□□□□□ -0.08
VCP-206ENST00000480327 SAMD9LQ8IVG5 1584 aa14.54□□□□□ -0.08
VCP-206ENST00000480327 FYCO1Q9BQS8 1478 aa14.52□□□□□ -0.08
VCP-206ENST00000480327 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
VCP-206ENST00000480327 CERKQ8TCT0 537 aa14.5□□□□□ -0.09
VCP-206ENST00000480327 SYCP2Q9BX26 1530 aa14.49□□□□□ -0.09
VCP-206ENST00000480327 SUPT6HQ7KZ85 1726 aaKnown RBP14.49□□□□□ -0.09
VCP-206ENST00000480327 GPATCH8Q9UKJ3 1502 aaKnown RBP14.48□□□□□ -0.09
VCP-206ENST00000480327 MROH2AA6NES4 1674 aa14.48□□□□□ -0.09
VCP-206ENST00000480327 UHRF1BP1Q6BDS2 1440 aa14.47□□□□□ -0.09
VCP-206ENST00000480327 INO80Q9ULG1 1556 aaPredicted RBP14.47□□□□□ -0.09
VCP-206ENST00000480327 PLXNC1O60486 1568 aa14.45□□□□□ -0.1
VCP-206ENST00000480327 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
VCP-206ENST00000480327 CLTCQ00610 1675 aaKnown RBP14.44□□□□□ -0.1
VCP-206ENST00000480327 ATP7AQ04656 1500 aa14.43□□□□□ -0.1
VCP-206ENST00000480327 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
VCP-206ENST00000480327 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
VCP-206ENST00000480327 TIAM1Q13009 1591 aa14.41□□□□□ -0.1
VCP-206ENST00000480327 PTPRTO14522 1441 aa14.41□□□□□ -0.1
VCP-206ENST00000480327 ZNF777Q9ULD5 760 aaPredicted RBP14.4□□□□□ -0.1
VCP-206ENST00000480327 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
VCP-206ENST00000480327 CNTLNQ9NXG0 1405 aa14.4□□□□□ -0.1
VCP-206ENST00000480327 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
VCP-206ENST00000480327 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
VCP-206ENST00000480327 MYO3AQ8NEV4 1616 aa14.39□□□□□ -0.11
VCP-206ENST00000480327 KIAA1107Q9UPP5 1409 aa14.39□□□□□ -0.11
VCP-206ENST00000480327 CAMSAP1Q5T5Y3 1602 aa14.38□□□□□ -0.11
VCP-206ENST00000480327 NPATQ14207 1427 aa14.37□□□□□ -0.11
VCP-206ENST00000480327 SPAG9O60271 1321 aaKnown RBP14.37□□□□□ -0.11
VCP-206ENST00000480327 A2MP01023 1474 aa14.37□□□□□ -0.11
VCP-206ENST00000480327 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
VCP-206ENST00000480327 PLEKHH2Q8IVE3 1493 aa14.36□□□□□ -0.11
VCP-206ENST00000480327 ZMYM3Q14202 1370 aa14.35□□□□□ -0.11
VCP-206ENST00000480327 MBD5Q9P267 1494 aa14.35□□□□□ -0.11
VCP-206ENST00000480327 EHBP1L1Q8N3D4 1523 aa14.34□□□□□ -0.11
VCP-206ENST00000480327 ZNF644Q9H582 1327 aaPredicted RBP14.34□□□□□ -0.11
VCP-206ENST00000480327 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
VCP-206ENST00000480327 PTPRKQ15262 1439 aa14.33□□□□□ -0.11
VCP-206ENST00000480327 ESF1Q9H501 851 aaKnown RBP14.33□□□□□ -0.12
VCP-206ENST00000480327 CFDP1Q9UEE9 299 aaPredicted RBP14.33□□□□□ -0.12
VCP-206ENST00000480327 CEP170BQ9Y4F5 1589 aaPredicted RBP14.33□□□□□ -0.12
VCP-206ENST00000480327 MTUS2Q5JR59 1369 aa14.31□□□□□ -0.12
VCP-206ENST00000480327 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
VCP-206ENST00000480327 TCOF1Q13428 1488 aaKnown RBP14.29□□□□□ -0.12
VCP-206ENST00000480327 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
VCP-206ENST00000480327 DNMT1P26358 1616 aaKnown RBP14.28□□□□□ -0.12
VCP-206ENST00000480327 PLA2R1Q13018 1463 aa14.28□□□□□ -0.12
VCP-206ENST00000480327 NCKAP5LQ9HCH0 1330 aa14.28□□□□□ -0.12
VCP-206ENST00000480327 POLR1AO95602 1720 aaPredicted RBP14.27□□□□□ -0.13
VCP-206ENST00000480327 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
VCP-206ENST00000480327 GGT6Q6P531 493 aa14.26□□□□□ -0.13
VCP-206ENST00000480327 ILDR2Q71H61 639 aa14.26□□□□□ -0.13
VCP-206ENST00000480327 CAMSAP2Q08AD1 1489 aa14.25□□□□□ -0.13
VCP-206ENST00000480327 NCOA2Q15596 1464 aa14.25□□□□□ -0.13
VCP-206ENST00000480327 SPATA31D1Q6ZQQ2 1576 aa14.25□□□□□ -0.13
VCP-206ENST00000480327 NEURL4Q96JN8 1562 aa14.25□□□□□ -0.13
VCP-206ENST00000480327 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
VCP-206ENST00000480327 DHX29Q7Z478 1369 aaKnown RBP14.23□□□□□ -0.13
VCP-206ENST00000480327 A2ML1A8K2U0 1454 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms