RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
CMSS1-204ENST00000479555 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
CMSS1-204ENST00000479555 NLRP6P59044 892 aa11.65□□□□□ -0.54
CMSS1-204ENST00000479555 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
CMSS1-204ENST00000479555 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
CMSS1-204ENST00000479555 MMRN1Q13201 1228 aa11.63□□□□□ -0.55
CMSS1-204ENST00000479555 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
CMSS1-204ENST00000479555 ERBB3P21860 1342 aa11.58□□□□□ -0.56
CMSS1-204ENST00000479555 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
CMSS1-204ENST00000479555 VARS2Q5ST30 1063 aaKnown RBP11.55□□□□□ -0.56
CMSS1-204ENST00000479555 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.56
CMSS1-204ENST00000479555 GPR153Q6NV75 609 aa11.54□□□□□ -0.56
CMSS1-204ENST00000479555 ARSIQ5FYB1 569 aa11.53□□□□□ -0.56
CMSS1-204ENST00000479555 PPP1R37O75864 691 aa11.52□□□□□ -0.57
CMSS1-204ENST00000479555 C2orf72A6NCS6 295 aa11.51□□□□□ -0.57
CMSS1-204ENST00000479555 KIF3CO14782 793 aa11.48□□□□□ -0.57
CMSS1-204ENST00000479555 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
CMSS1-204ENST00000479555 NUDT7P0C024 238 aa11.4□□□□□ -0.58
CMSS1-204ENST00000479555 HS6ST3Q8IZP7 471 aa11.39□□□□□ -0.59
CMSS1-204ENST00000479555 ZNF687Q8N1G0 1237 aa11.39□□□□□ -0.59
CMSS1-204ENST00000479555 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
CMSS1-204ENST00000479555 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
CMSS1-204ENST00000479555 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
CMSS1-204ENST00000479555 PCDHGA4Q9Y5G9 962 aa11.35□□□□□ -0.59
CMSS1-204ENST00000479555 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-204ENST00000479555 LHX6Q9UPM6 363 aa11.32□□□□□ -0.6
CMSS1-204ENST00000479555 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
CMSS1-204ENST00000479555 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-204ENST00000479555 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
CMSS1-204ENST00000479555 SLC34A2O95436 690 aa11.28□□□□□ -0.6
CMSS1-204ENST00000479555 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
CMSS1-204ENST00000479555 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.61
CMSS1-204ENST00000479555 LSM11P83369 360 aaKnown RBP eCLIP11.25□□□□□ -0.61
CMSS1-204ENST00000479555 DSG2Q14126 1118 aa11.25□□□□□ -0.61
CMSS1-204ENST00000479555 PLPP6Q8IY26 295 aa11.25□□□□□ -0.61
CMSS1-204ENST00000479555 FOXK1P85037 733 aa11.22□□□□□ -0.61
CMSS1-204ENST00000479555 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
CMSS1-204ENST00000479555 KDM4FA0A1W2PPD8 638 aa11.19□□□□□ -0.62
CMSS1-204ENST00000479555 PTCD2Q8WV60 388 aaKnown RBP11.18□□□□□ -0.62
CMSS1-204ENST00000479555 UPF1Q92900 1129 aaKnown RBP eCLIP11.16□□□□□ -0.62
CMSS1-204ENST00000479555 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
CMSS1-204ENST00000479555 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
CMSS1-204ENST00000479555 PBX2P40425 430 aa11.14□□□□□ -0.63
CMSS1-204ENST00000479555 PSEN2P49810 448 aa11.13□□□□□ -0.63
CMSS1-204ENST00000479555 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
CMSS1-204ENST00000479555 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
CMSS1-204ENST00000479555 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
CMSS1-204ENST00000479555 NCKAP5LQ9HCH0 1330 aa11.1□□□□□ -0.63
CMSS1-204ENST00000479555 PTGER2P43116 358 aa11.1□□□□□ -0.63
CMSS1-204ENST00000479555 ARHGAP33O14559 1287 aa11.09□□□□□ -0.63
CMSS1-204ENST00000479555 PPP1R15BQ5SWA1 713 aa11.09□□□□□ -0.63
CMSS1-204ENST00000479555 OXER1Q8TDS5 423 aa11.08□□□□□ -0.64
CMSS1-204ENST00000479555 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
CMSS1-204ENST00000479555 TBC1D12O60347 775 aa11.05□□□□□ -0.64
CMSS1-204ENST00000479555 RYDENQ9NUL5 291 aaKnown RBP11.05□□□□□ -0.64
CMSS1-204ENST00000479555 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
CMSS1-204ENST00000479555 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
CMSS1-204ENST00000479555 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
CMSS1-204ENST00000479555 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
CMSS1-204ENST00000479555 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
CMSS1-204ENST00000479555 CADPS2Q86UW7 1296 aa11□□□□□ -0.65
CMSS1-204ENST00000479555 PDE4AP27815 886 aa10.99□□□□□ -0.65
CMSS1-204ENST00000479555 HRO43593 1189 aa10.98□□□□□ -0.65
CMSS1-204ENST00000479555 DDX27Q96GQ7 796 aaKnown RBP10.96□□□□□ -0.65
CMSS1-204ENST00000479555 TK2O00142 265 aa10.95□□□□□ -0.66
CMSS1-204ENST00000479555 EVI5O60447 810 aa10.94□□□□□ -0.66
CMSS1-204ENST00000479555 EMILIN3Q9NT22 766 aa10.94□□□□□ -0.66
CMSS1-204ENST00000479555 FOSBP53539 338 aa10.93□□□□□ -0.66
CMSS1-204ENST00000479555 KCTD12Q96CX2 325 aaKnown RBP10.93□□□□□ -0.66
CMSS1-204ENST00000479555 MFSD10Q14728 455 aa10.91□□□□□ -0.66
CMSS1-204ENST00000479555 VPS9D1Q9Y2B5 631 aa10.91□□□□□ -0.66
CMSS1-204ENST00000479555 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
CMSS1-204ENST00000479555 BCL2L12Q9HB09 334 aa10.9□□□□□ -0.66
CMSS1-204ENST00000479555 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
CMSS1-204ENST00000479555 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
CMSS1-204ENST00000479555 KCNH8Q96L42 1107 aa10.88□□□□□ -0.67
CMSS1-204ENST00000479555 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
CMSS1-204ENST00000479555 JPH4Q96JJ6 628 aa10.87□□□□□ -0.67
CMSS1-204ENST00000479555 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
CMSS1-204ENST00000479555 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
CMSS1-204ENST00000479555 PTPREP23469 700 aa10.85□□□□□ -0.67
CMSS1-204ENST00000479555 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
CMSS1-204ENST00000479555 ZBED2Q9BTP6 218 aa10.84□□□□□ -0.67
CMSS1-204ENST00000479555 PTPN5P54829 565 aa10.82□□□□□ -0.68
CMSS1-204ENST00000479555 PCDHGA10Q9Y5H3 936 aa10.82□□□□□ -0.68
CMSS1-204ENST00000479555 BHMG1C9JSJ3 638 aaPredicted RBP10.79□□□□□ -0.68
CMSS1-204ENST00000479555 DPYSL4O14531 572 aa10.78□□□□□ -0.68
CMSS1-204ENST00000479555 COL9A1P20849 921 aa10.78□□□□□ -0.68
CMSS1-204ENST00000479555 PROX2Q3B8N5 592 aa10.78□□□□□ -0.68
CMSS1-204ENST00000479555 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
CMSS1-204ENST00000479555 CAMK2BQ13554 666 aa10.74□□□□□ -0.69
CMSS1-204ENST00000479555 THSD4Q6ZMP0 1018 aa10.74□□□□□ -0.69
CMSS1-204ENST00000479555 MRPL50Q8N5N7 158 aaKnown RBP10.74□□□□□ -0.69
CMSS1-204ENST00000479555 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-204ENST00000479555 WNT2BQ93097 391 aa10.73□□□□□ -0.69
CMSS1-204ENST00000479555 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
CMSS1-204ENST00000479555 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
CMSS1-204ENST00000479555 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
CMSS1-204ENST00000479555 PHF14O94880 888 aa10.71□□□□□ -0.69
CMSS1-204ENST00000479555 DDX12PQ92771 950 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms