RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 MMRN1Q13201 1228 aa7.76□□□□□ -1.17
CACUL1-202ENST00000477583 STK25O00506 426 aa7.75□□□□□ -1.17
CACUL1-202ENST00000477583 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
CACUL1-202ENST00000477583 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
CACUL1-202ENST00000477583 ERBB3P21860 1342 aa7.74□□□□□ -1.17
CACUL1-202ENST00000477583 FBXO22Q8NEZ5 403 aa7.73□□□□□ -1.17
CACUL1-202ENST00000477583 MFRPQ9BY79 579 aa7.72□□□□□ -1.17
CACUL1-202ENST00000477583 PKD2Q13563 968 aa7.71□□□□□ -1.18
CACUL1-202ENST00000477583 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
CACUL1-202ENST00000477583 RGL2O15211 777 aa7.7□□□□□ -1.18
CACUL1-202ENST00000477583 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
CACUL1-202ENST00000477583 GPR153Q6NV75 609 aa7.67□□□□□ -1.18
CACUL1-202ENST00000477583 ARSIQ5FYB1 569 aa7.63□□□□□ -1.19
CACUL1-202ENST00000477583 C2orf72A6NCS6 295 aa7.62□□□□□ -1.19
CACUL1-202ENST00000477583 ZNF687Q8N1G0 1237 aa7.62□□□□□ -1.19
CACUL1-202ENST00000477583 KIF3CO14782 793 aa7.61□□□□□ -1.19
CACUL1-202ENST00000477583 KHSRPQ92945 711 aaKnown RBP eCLIP7.6□□□□□ -1.192e-7■□□□□ 9.7
CACUL1-202ENST00000477583 TMC2Q8TDI7 906 aa7.59□□□□□ -1.19
CACUL1-202ENST00000477583 ZNF316A6NFI3 1004 aaPredicted RBP7.58□□□□□ -1.2
CACUL1-202ENST00000477583 PPP1R37O75864 691 aa7.56□□□□□ -1.2
CACUL1-202ENST00000477583 NUDT7P0C024 238 aa7.55□□□□□ -1.2
CACUL1-202ENST00000477583 HS6ST3Q8IZP7 471 aa7.55□□□□□ -1.2
CACUL1-202ENST00000477583 RNF166Q96A37 237 aaPredicted RBP7.55□□□□□ -1.2
CACUL1-202ENST00000477583 SLC34A2O95436 690 aa7.54□□□□□ -1.2
CACUL1-202ENST00000477583 MYT1LQ9UL68 1186 aa7.54□□□□□ -1.2
CACUL1-202ENST00000477583 PCDHGA4Q9Y5G9 962 aa7.54□□□□□ -1.2
CACUL1-202ENST00000477583 PTGER2P43116 358 aa7.52□□□□□ -1.21
CACUL1-202ENST00000477583 CHGAP10645 457 aaKnown RBP7.51□□□□□ -1.21
CACUL1-202ENST00000477583 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
CACUL1-202ENST00000477583 LHX6Q9UPM6 363 aa7.51□□□□□ -1.21
CACUL1-202ENST00000477583 PBX2P40425 430 aa7.49□□□□□ -1.21
CACUL1-202ENST00000477583 LSM11P83369 360 aaKnown RBP eCLIP7.49□□□□□ -1.21
CACUL1-202ENST00000477583 FOXK1P85037 733 aa7.47□□□□□ -1.21
CACUL1-202ENST00000477583 PLPP6Q8IY26 295 aa7.46□□□□□ -1.22
CACUL1-202ENST00000477583 PTCD2Q8WV60 388 aaKnown RBP7.46□□□□□ -1.22
CACUL1-202ENST00000477583 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.22
CACUL1-202ENST00000477583 PSDA5PKW4 1024 aaPredicted RBP7.45□□□□□ -1.22
CACUL1-202ENST00000477583 POTEEQ6S8J3 1075 aa7.45□□□□□ -1.22
CACUL1-202ENST00000477583 AXIN2Q9Y2T1 843 aa7.45□□□□□ -1.22
CACUL1-202ENST00000477583 DSG2Q14126 1118 aa7.44□□□□□ -1.22
CACUL1-202ENST00000477583 DNAJC5Q9H3Z4 198 aa7.44□□□□□ -1.22
CACUL1-202ENST00000477583 RYDENQ9NUL5 291 aaKnown RBP7.44□□□□□ -1.22
CACUL1-202ENST00000477583 NKX1-1Q15270 411 aaPredicted RBP7.43□□□□□ -1.22
CACUL1-202ENST00000477583 KDM4FA0A1W2PPD8 638 aa7.41□□□□□ -1.22
CACUL1-202ENST00000477583 ARHGAP33O14559 1287 aa7.4□□□□□ -1.22
CACUL1-202ENST00000477583 TBC1D12O60347 775 aa7.4□□□□□ -1.22
CACUL1-202ENST00000477583 PPP4R3BQ5MIZ7 849 aa7.38□□□□□ -1.23
CACUL1-202ENST00000477583 ADGRD1Q6QNK2 874 aa7.38□□□□□ -1.23
CACUL1-202ENST00000477583 CRISPLD2Q9H0B8 497 aa7.37□□□□□ -1.23
CACUL1-202ENST00000477583 UPF1Q92900 1129 aaKnown RBP eCLIP7.36□□□□□ -1.23
CACUL1-202ENST00000477583 PSEN2P49810 448 aa7.35□□□□□ -1.23
CACUL1-202ENST00000477583 PPP1R15BQ5SWA1 713 aa7.35□□□□□ -1.23
CACUL1-202ENST00000477583 DMRTA1Q5VZB9 504 aa7.35□□□□□ -1.23
CACUL1-202ENST00000477583 OXER1Q8TDS5 423 aa7.35□□□□□ -1.23
CACUL1-202ENST00000477583 TK2O00142 265 aa7.34□□□□□ -1.23
CACUL1-202ENST00000477583 KCNH8Q96L42 1107 aa7.34□□□□□ -1.23
CACUL1-202ENST00000477583 KCNK17Q96T54 332 aa7.33□□□□□ -1.24
CACUL1-202ENST00000477583 NCKAP5LQ9HCH0 1330 aa7.32□□□□□ -1.24
CACUL1-202ENST00000477583 DCAF8L2P0C7V8 631 aa7.32□□□□□ -1.24
CACUL1-202ENST00000477583 PDE4AP27815 886 aa7.32□□□□□ -1.24
CACUL1-202ENST00000477583 HRO43593 1189 aa7.31□□□□□ -1.24
CACUL1-202ENST00000477583 GTPBP6O43824 516 aaPredicted RBP7.31□□□□□ -1.24
CACUL1-202ENST00000477583 ZNF454Q8N9F8 522 aa7.31□□□□□ -1.24
CACUL1-202ENST00000477583 HCSTQ9UBK5 93 aa7.31□□□□□ -1.24
CACUL1-202ENST00000477583 STAC3Q96MF2 364 aa7.29□□□□□ -1.24
CACUL1-202ENST00000477583 DDX27Q96GQ7 796 aaKnown RBP7.28□□□□□ -1.24
CACUL1-202ENST00000477583 LARP6Q9BRS8 491 aaKnown RBP7.28□□□□□ -1.24
CACUL1-202ENST00000477583 BCL2L12Q9HB09 334 aa7.27□□□□□ -1.25
CACUL1-202ENST00000477583 PLA2G2EQ9NZK7 142 aa7.27□□□□□ -1.25
CACUL1-202ENST00000477583 FOSBP53539 338 aa7.26□□□□□ -1.25
CACUL1-202ENST00000477583 KCTD12Q96CX2 325 aaKnown RBP7.26□□□□□ -1.25
CACUL1-202ENST00000477583 VPS9D1Q9Y2B5 631 aa7.26□□□□□ -1.25
CACUL1-202ENST00000477583 EVI5O60447 810 aa7.25□□□□□ -1.25
CACUL1-202ENST00000477583 PTPREP23469 700 aa7.25□□□□□ -1.25
CACUL1-202ENST00000477583 MFSD10Q14728 455 aa7.25□□□□□ -1.25
CACUL1-202ENST00000477583 JPH4Q96JJ6 628 aa7.25□□□□□ -1.25
CACUL1-202ENST00000477583 MAP3K9P80192 1104 aa7.23□□□□□ -1.25
CACUL1-202ENST00000477583 SLC4A5Q9BY07 1137 aa7.23□□□□□ -1.25
CACUL1-202ENST00000477583 ANO8Q9HCE9 1232 aaPredicted RBP7.23□□□□□ -1.25
CACUL1-202ENST00000477583 ZDHHC16Q969W1 377 aa7.22□□□□□ -1.25
CACUL1-202ENST00000477583 ZBED2Q9BTP6 218 aa7.2□□□□□ -1.26
CACUL1-202ENST00000477583 ADAM33Q9BZ11 813 aa7.2□□□□□ -1.26
CACUL1-202ENST00000477583 EMILIN3Q9NT22 766 aa7.2□□□□□ -1.26
CACUL1-202ENST00000477583 CADPS2Q86UW7 1296 aa7.19□□□□□ -1.26
CACUL1-202ENST00000477583 BHMG1C9JSJ3 638 aaPredicted RBP7.18□□□□□ -1.26
CACUL1-202ENST00000477583 PTPN5P54829 565 aa7.18□□□□□ -1.26
CACUL1-202ENST00000477583 GOLGA8CPA6NN73 597 aa7.17□□□□□ -1.26
CACUL1-202ENST00000477583 MRPL50Q8N5N7 158 aaKnown RBP7.17□□□□□ -1.26
CACUL1-202ENST00000477583 NBPF3Q9H094 633 aa7.17□□□□□ -1.26
CACUL1-202ENST00000477583 PPP1R3GB7ZBB8 358 aa7.16□□□□□ -1.26
CACUL1-202ENST00000477583 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
CACUL1-202ENST00000477583 WNT2BQ93097 391 aa7.16□□□□□ -1.26
CACUL1-202ENST00000477583 PCDHGA10Q9Y5H3 936 aa7.16□□□□□ -1.26
CACUL1-202ENST00000477583 PHF14O94880 888 aa7.14□□□□□ -1.27
CACUL1-202ENST00000477583 TYW1BQ6NUM6 668 aa7.14□□□□□ -1.27
CACUL1-202ENST00000477583 FBXW7Q969H0 707 aa7.14□□□□□ -1.27
CACUL1-202ENST00000477583 CAMK2BQ13554 666 aa7.13□□□□□ -1.27
CACUL1-202ENST00000477583 RABGEF1Q9UJ41 708 aa7.12□□□□□ -1.27
CACUL1-202ENST00000477583 DPYSL4O14531 572 aa7.11□□□□□ -1.27
CACUL1-202ENST00000477583 COL9A1P20849 921 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms