RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PTGER2P43116 358 aa10.86□□□□□ -0.67
XRN1-211ENST00000477237 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
XRN1-211ENST00000477237 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
XRN1-211ENST00000477237 KHSRPQ92945 711 aaKnown RBP eCLIP10.85□□□□□ -0.677e-13■■■■■ 45.1
XRN1-211ENST00000477237 RNF25Q96BH1 459 aaPredicted RBP10.83□□□□□ -0.68
XRN1-211ENST00000477237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.82□□□□□ -0.68
XRN1-211ENST00000477237 ZFP91Q96JP5 570 aaPredicted RBP10.82□□□□□ -0.68
XRN1-211ENST00000477237 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
XRN1-211ENST00000477237 RIOK3O14730 519 aaKnown RBP10.81□□□□□ -0.68
XRN1-211ENST00000477237 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
XRN1-211ENST00000477237 VGFO15240 615 aaPredicted RBP10.76□□□□□ -0.69
XRN1-211ENST00000477237 FBXO22Q8NEZ5 403 aa10.72□□□□□ -0.69
XRN1-211ENST00000477237 NLRP6P59044 892 aa10.71□□□□□ -0.69
XRN1-211ENST00000477237 POTEEQ6S8J3 1075 aa10.71□□□□□ -0.69
XRN1-211ENST00000477237 NUDT7P0C024 238 aa10.7□□□□□ -0.7
XRN1-211ENST00000477237 KIF3CO14782 793 aa10.69□□□□□ -0.7
XRN1-211ENST00000477237 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
XRN1-211ENST00000477237 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
XRN1-211ENST00000477237 PBX2P40425 430 aa10.67□□□□□ -0.7
XRN1-211ENST00000477237 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
XRN1-211ENST00000477237 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
XRN1-211ENST00000477237 PLA2G2EQ9NZK7 142 aa10.65□□□□□ -0.7
XRN1-211ENST00000477237 MFRPQ9BY79 579 aa10.64□□□□□ -0.71
XRN1-211ENST00000477237 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
XRN1-211ENST00000477237 SLC34A2O95436 690 aa10.6□□□□□ -0.71
XRN1-211ENST00000477237 HCSTQ9UBK5 93 aa10.6□□□□□ -0.71
XRN1-211ENST00000477237 STK24Q9Y6E0 443 aa10.6□□□□□ -0.71
XRN1-211ENST00000477237 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
XRN1-211ENST00000477237 ARHGAP33O14559 1287 aa10.54□□□□□ -0.72
XRN1-211ENST00000477237 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
XRN1-211ENST00000477237 STK25O00506 426 aa10.52□□□□□ -0.73
XRN1-211ENST00000477237 TMC2Q8TDI7 906 aa10.52□□□□□ -0.73
XRN1-211ENST00000477237 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
XRN1-211ENST00000477237 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
XRN1-211ENST00000477237 HRO43593 1189 aa10.49□□□□□ -0.73
XRN1-211ENST00000477237 PSEN2P49810 448 aa10.48□□□□□ -0.73
XRN1-211ENST00000477237 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
XRN1-211ENST00000477237 TK2O00142 265 aa10.47□□□□□ -0.73
XRN1-211ENST00000477237 PPP1R37O75864 691 aa10.44□□□□□ -0.74
XRN1-211ENST00000477237 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
XRN1-211ENST00000477237 KCTD12Q96CX2 325 aaKnown RBP10.43□□□□□ -0.74
XRN1-211ENST00000477237 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
XRN1-211ENST00000477237 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
XRN1-211ENST00000477237 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
XRN1-211ENST00000477237 RGL2O15211 777 aa10.35□□□□□ -0.75
XRN1-211ENST00000477237 FOXK1P85037 733 aa10.35□□□□□ -0.75
XRN1-211ENST00000477237 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
XRN1-211ENST00000477237 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
XRN1-211ENST00000477237 PTPN5P54829 565 aa10.32□□□□□ -0.76
XRN1-211ENST00000477237 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
XRN1-211ENST00000477237 DSG2Q14126 1118 aa10.3□□□□□ -0.76
XRN1-211ENST00000477237 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
XRN1-211ENST00000477237 TBC1D12O60347 775 aa10.28□□□□□ -0.76
XRN1-211ENST00000477237 PKD2Q13563 968 aa10.28□□□□□ -0.76
XRN1-211ENST00000477237 RGS20O76081 388 aa10.26□□□□□ -0.77
XRN1-211ENST00000477237 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
XRN1-211ENST00000477237 KCNH8Q96L42 1107 aa10.26□□□□□ -0.77
XRN1-211ENST00000477237 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
XRN1-211ENST00000477237 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
XRN1-211ENST00000477237 BHMG1C9JSJ3 638 aaPredicted RBP10.22□□□□□ -0.77
XRN1-211ENST00000477237 ZNF454Q8N9F8 522 aa10.22□□□□□ -0.77
XRN1-211ENST00000477237 SLC4A5Q9BY07 1137 aa10.22□□□□□ -0.77
XRN1-211ENST00000477237 A0A0G2JS52 829 aa10.21□□□□□ -0.77
XRN1-211ENST00000477237 OXER1Q8TDS5 423 aa10.21□□□□□ -0.77
XRN1-211ENST00000477237 BCL2L12Q9HB09 334 aa10.21□□□□□ -0.77
XRN1-211ENST00000477237 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
XRN1-211ENST00000477237 WNT2BQ93097 391 aa10.17□□□□□ -0.78
XRN1-211ENST00000477237 FOSBP53539 338 aa10.16□□□□□ -0.78
XRN1-211ENST00000477237 ZBED2Q9BTP6 218 aa10.16□□□□□ -0.78
XRN1-211ENST00000477237 GOLGA8CPA6NN73 597 aa10.15□□□□□ -0.78
XRN1-211ENST00000477237 PTPREP23469 700 aa10.14□□□□□ -0.79
XRN1-211ENST00000477237 MRPL50Q8N5N7 158 aaKnown RBP10.14□□□□□ -0.79
XRN1-211ENST00000477237 HS6ST3Q8IZP7 471 aa10.11□□□□□ -0.79
XRN1-211ENST00000477237 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
XRN1-211ENST00000477237 PPP1R15BQ5SWA1 713 aa10.08□□□□□ -0.8
XRN1-211ENST00000477237 ADAM33Q9BZ11 813 aa10.08□□□□□ -0.8
XRN1-211ENST00000477237 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
XRN1-211ENST00000477237 JPH4Q96JJ6 628 aa10.07□□□□□ -0.8
XRN1-211ENST00000477237 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
XRN1-211ENST00000477237 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
XRN1-211ENST00000477237 EVI5O60447 810 aa10.04□□□□□ -0.8
XRN1-211ENST00000477237 ITGBL1O95965 494 aaPredicted RBP10.03□□□□□ -0.8
XRN1-211ENST00000477237 NKX1-1Q15270 411 aaPredicted RBP10.02□□□□□ -0.81
XRN1-211ENST00000477237 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
XRN1-211ENST00000477237 Q6ZNB5 142 aa10.01□□□□□ -0.81
XRN1-211ENST00000477237 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
XRN1-211ENST00000477237 PROX2Q3B8N5 592 aa10□□□□□ -0.81
XRN1-211ENST00000477237 BCAMP50895 628 aa9.99□□□□□ -0.81
XRN1-211ENST00000477237 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
XRN1-211ENST00000477237 RABGEF1Q9UJ41 708 aa9.99□□□□□ -0.81
XRN1-211ENST00000477237 PPP1R3GB7ZBB8 358 aa9.98□□□□□ -0.81
XRN1-211ENST00000477237 COL9A1P20849 921 aa9.97□□□□□ -0.81
XRN1-211ENST00000477237 PDE4AP27815 886 aa9.96□□□□□ -0.82
XRN1-211ENST00000477237 DNAJC5Q9H3Z4 198 aa9.95□□□□□ -0.82
XRN1-211ENST00000477237 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
XRN1-211ENST00000477237 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
XRN1-211ENST00000477237 MAP3K9P80192 1104 aa9.93□□□□□ -0.82
XRN1-211ENST00000477237 WBP1LQ9NX94 342 aa9.92□□□□□ -0.82
XRN1-211ENST00000477237 LAPTM4BQ86VI4 370 aa9.91□□□□□ -0.82
XRN1-211ENST00000477237 ZFRQ96KR1 1074 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms