RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
LSM2-212ENST00000477182 ARHGEF12Q9NZN5 1544 aa19.08■□□□□ 0.64
LSM2-212ENST00000477182 SETD1BQ9UPS6 1966 aaKnown RBP19.07■□□□□ 0.64
LSM2-212ENST00000477182 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
LSM2-212ENST00000477182 NUP153P49790 1475 aaKnown RBP19.06■□□□□ 0.64
LSM2-212ENST00000477182 UHRF1BP1Q6BDS2 1440 aa19.06■□□□□ 0.64
LSM2-212ENST00000477182 HECW1Q76N89 1606 aa19.05■□□□□ 0.64
LSM2-212ENST00000477182 PTPRTO14522 1441 aa19.05■□□□□ 0.64
LSM2-212ENST00000477182 IQSEC2Q5JU85 1478 aa19.04■□□□□ 0.64
LSM2-212ENST00000477182 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.03■□□□□ 0.643e-6■□□□□ 11.3
LSM2-212ENST00000477182 ATP10AO60312 1499 aa19.03■□□□□ 0.64
LSM2-212ENST00000477182 C9orf84Q5VXU9 1444 aa19.01■□□□□ 0.63
LSM2-212ENST00000477182 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
LSM2-212ENST00000477182 EEA1Q15075 1411 aa18.99■□□□□ 0.63
LSM2-212ENST00000477182 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
LSM2-212ENST00000477182 LTBP4Q8N2S1 1624 aa18.97■□□□□ 0.63
LSM2-212ENST00000477182 PLCH2O75038 1416 aa18.92■□□□□ 0.62
LSM2-212ENST00000477182 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
LSM2-212ENST00000477182 EFCAB2Q5VUJ9 269 aa18.88■□□□□ 0.61
LSM2-212ENST00000477182 C3P01024 1663 aa18.87■□□□□ 0.61
LSM2-212ENST00000477182 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
LSM2-212ENST00000477182 ZNF518AQ6AHZ1 1483 aa18.86■□□□□ 0.61
LSM2-212ENST00000477182 NCOA1Q15788 1441 aa18.86■□□□□ 0.61
LSM2-212ENST00000477182 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
LSM2-212ENST00000477182 UBAP1LF5GYI3 381 aa18.84■□□□□ 0.61
LSM2-212ENST00000477182 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
LSM2-212ENST00000477182 MYO5CQ9NQX4 1742 aa18.83■□□□□ 0.61
LSM2-212ENST00000477182 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
LSM2-212ENST00000477182 KDM5CP41229 1560 aa18.81■□□□□ 0.6
LSM2-212ENST00000477182 RANGAP1P46060 587 aaPredicted RBP18.81■□□□□ 0.6
LSM2-212ENST00000477182 DIP2CQ9Y2E4 1556 aa18.79■□□□□ 0.6
LSM2-212ENST00000477182 AGLP35573 1532 aa18.79■□□□□ 0.6
LSM2-212ENST00000477182 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
LSM2-212ENST00000477182 CNTLNQ9NXG0 1405 aa18.78■□□□□ 0.6
LSM2-212ENST00000477182 AFAP1Q8N556 730 aa18.78■□□□□ 0.6
LSM2-212ENST00000477182 CAMSAP1Q5T5Y3 1602 aa18.78■□□□□ 0.6
LSM2-212ENST00000477182 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
LSM2-212ENST00000477182 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
LSM2-212ENST00000477182 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
LSM2-212ENST00000477182 MLH3Q9UHC1 1453 aa18.74■□□□□ 0.59
LSM2-212ENST00000477182 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
LSM2-212ENST00000477182 NPATQ14207 1427 aa18.74■□□□□ 0.59
LSM2-212ENST00000477182 ABCA6Q8N139 1617 aa18.73■□□□□ 0.59
LSM2-212ENST00000477182 MED1Q15648 1581 aaPredicted RBP18.72■□□□□ 0.59
LSM2-212ENST00000477182 PKD2Q13563 968 aa18.71■□□□□ 0.59
LSM2-212ENST00000477182 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
LSM2-212ENST00000477182 KIF14Q15058 1648 aa18.7■□□□□ 0.58
LSM2-212ENST00000477182 MROH2AA6NES4 1674 aa18.69■□□□□ 0.58
LSM2-212ENST00000477182 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
LSM2-212ENST00000477182 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
LSM2-212ENST00000477182 HSPA1LP34931 641 aa18.66■□□□□ 0.58
LSM2-212ENST00000477182 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
LSM2-212ENST00000477182 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
LSM2-212ENST00000477182 SUPT6HQ7KZ85 1726 aaKnown RBP18.65■□□□□ 0.58
LSM2-212ENST00000477182 CLIP1P30622 1438 aa18.65■□□□□ 0.58
LSM2-212ENST00000477182 TOM1O60784 492 aa18.64■□□□□ 0.57
LSM2-212ENST00000477182 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
LSM2-212ENST00000477182 ZMYM3Q14202 1370 aa18.64■□□□□ 0.57
LSM2-212ENST00000477182 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
LSM2-212ENST00000477182 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
LSM2-212ENST00000477182 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
LSM2-212ENST00000477182 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
LSM2-212ENST00000477182 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
LSM2-212ENST00000477182 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
LSM2-212ENST00000477182 CDC42BPBQ9Y5S2 1711 aa18.62■□□□□ 0.57
LSM2-212ENST00000477182 PIP4K2BP78356 416 aa18.61■□□□□ 0.57
LSM2-212ENST00000477182 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
LSM2-212ENST00000477182 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
LSM2-212ENST00000477182 ABCC1P33527 1531 aa18.59■□□□□ 0.57
LSM2-212ENST00000477182 ITSN2Q9NZM3 1697 aa18.59■□□□□ 0.57
LSM2-212ENST00000477182 CEP170BQ9Y4F5 1589 aaPredicted RBP18.59■□□□□ 0.57
LSM2-212ENST00000477182 CPS1P31327 1500 aa18.57■□□□□ 0.56
LSM2-212ENST00000477182 PREX2Q70Z35 1606 aa18.56■□□□□ 0.56
LSM2-212ENST00000477182 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
LSM2-212ENST00000477182 PTPRKQ15262 1439 aa18.52■□□□□ 0.56
LSM2-212ENST00000477182 SHANK2Q9UPX8 1470 aa18.49■□□□□ 0.55
LSM2-212ENST00000477182 SAMD9LQ8IVG5 1584 aa18.49■□□□□ 0.55
LSM2-212ENST00000477182 A2ML1A8K2U0 1454 aa18.48■□□□□ 0.55
LSM2-212ENST00000477182 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
LSM2-212ENST00000477182 SPAG9O60271 1321 aaKnown RBP18.48■□□□□ 0.55
LSM2-212ENST00000477182 DNMT1P26358 1616 aaKnown RBP18.46■□□□□ 0.55
LSM2-212ENST00000477182 LRRIQ1Q96JM4 1722 aa18.45■□□□□ 0.54
LSM2-212ENST00000477182 ARHGAP35Q9NRY4 1499 aa18.45■□□□□ 0.54
LSM2-212ENST00000477182 CDC42BPAQ5VT25 1732 aa18.44■□□□□ 0.54
LSM2-212ENST00000477182 PLXNC1O60486 1568 aa18.44■□□□□ 0.54
LSM2-212ENST00000477182 GGT6Q6P531 493 aa18.44■□□□□ 0.54
LSM2-212ENST00000477182 A2MP01023 1474 aa18.43■□□□□ 0.54
LSM2-212ENST00000477182 CEP162Q5TB80 1403 aa18.42■□□□□ 0.54
LSM2-212ENST00000477182 ATP7AQ04656 1500 aa18.42■□□□□ 0.54
LSM2-212ENST00000477182 NEURL4Q96JN8 1562 aa18.41■□□□□ 0.54
LSM2-212ENST00000477182 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
LSM2-212ENST00000477182 SYCP2Q9BX26 1530 aa18.4■□□□□ 0.54
LSM2-212ENST00000477182 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
LSM2-212ENST00000477182 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
LSM2-212ENST00000477182 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
LSM2-212ENST00000477182 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
LSM2-212ENST00000477182 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
LSM2-212ENST00000477182 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.53
LSM2-212ENST00000477182 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
LSM2-212ENST00000477182 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms