RNA–Protein interactions for RNA: ENST00000476977.5

GTF2IRD1-205, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 5,868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-205ENST00000476977 ZRSR1Q15695 479 aaKnown RBP19.08■□□□□ 0.64
GTF2IRD1-205ENST00000476977 SMARCA2P51531 1590 aa19.08■□□□□ 0.64
GTF2IRD1-205ENST00000476977 KCNJ4P48050 445 aa19.06■□□□□ 0.64
GTF2IRD1-205ENST00000476977 LTV1Q96GA3 475 aaPredicted RBP19.05■□□□□ 0.64
GTF2IRD1-205ENST00000476977 HNRNPMP52272 730 aaKnown RBP eCLIP19.05■□□□□ 0.64
GTF2IRD1-205ENST00000476977 CEP162Q5TB80 1403 aa19.05■□□□□ 0.64
GTF2IRD1-205ENST00000476977 NCLP19338 710 aaKnown RBP19.05■□□□□ 0.64
GTF2IRD1-205ENST00000476977 GTF3C3Q9Y5Q9 886 aa19.03■□□□□ 0.64
GTF2IRD1-205ENST00000476977 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
GTF2IRD1-205ENST00000476977 FRAT1Q92837 279 aaPredicted RBP19.03■□□□□ 0.64
GTF2IRD1-205ENST00000476977 TPRNQ4KMQ1 711 aa19.02■□□□□ 0.64
GTF2IRD1-205ENST00000476977 AMPHP49418 695 aa19.01■□□□□ 0.63
GTF2IRD1-205ENST00000476977 PKD2Q13563 968 aa19■□□□□ 0.63
GTF2IRD1-205ENST00000476977 TAF7LQ5H9L4 462 aa19■□□□□ 0.63
GTF2IRD1-205ENST00000476977 CHMP3Q9Y3E7 222 aa18.99■□□□□ 0.63
GTF2IRD1-205ENST00000476977 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
GTF2IRD1-205ENST00000476977 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
GTF2IRD1-205ENST00000476977 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
GTF2IRD1-205ENST00000476977 FOXD1Q16676 465 aa18.97■□□□□ 0.63
GTF2IRD1-205ENST00000476977 ATF3P18847 181 aa18.95■□□□□ 0.62
GTF2IRD1-205ENST00000476977 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
GTF2IRD1-205ENST00000476977 PTPRGP23470 1445 aa18.93■□□□□ 0.62
GTF2IRD1-205ENST00000476977 FRAT2O75474 233 aaPredicted RBP18.93■□□□□ 0.62
GTF2IRD1-205ENST00000476977 GORABQ5T7V8 394 aa18.93■□□□□ 0.62
GTF2IRD1-205ENST00000476977 NUP155O75694 1391 aa18.92■□□□□ 0.62
GTF2IRD1-205ENST00000476977 ANKRD30AQ9BXX3 1397 aa18.91■□□□□ 0.62
GTF2IRD1-205ENST00000476977 IRX6P78412 446 aaPredicted RBP18.91■□□□□ 0.62
GTF2IRD1-205ENST00000476977 TERF2IPQ9NYB0 399 aa18.9■□□□□ 0.62
GTF2IRD1-205ENST00000476977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.89■□□□□ 0.61
GTF2IRD1-205ENST00000476977 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
GTF2IRD1-205ENST00000476977 MS4A1P11836 297 aa18.88■□□□□ 0.61
GTF2IRD1-205ENST00000476977 EIF5BO60841 1220 aaKnown RBP18.87■□□□□ 0.61
GTF2IRD1-205ENST00000476977 PSME1Q06323 249 aa18.87■□□□□ 0.61
GTF2IRD1-205ENST00000476977 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
GTF2IRD1-205ENST00000476977 RSPH4AQ5TD94 716 aa18.85■□□□□ 0.61
GTF2IRD1-205ENST00000476977 CHMP4AQ9BY43 222 aa18.84■□□□□ 0.61
GTF2IRD1-205ENST00000476977 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
GTF2IRD1-205ENST00000476977 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
GTF2IRD1-205ENST00000476977 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
GTF2IRD1-205ENST00000476977 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
GTF2IRD1-205ENST00000476977 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.61
GTF2IRD1-205ENST00000476977 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
GTF2IRD1-205ENST00000476977 STK31Q9BXU1 1019 aa18.82■□□□□ 0.6
GTF2IRD1-205ENST00000476977 FMN1Q68DA7 1419 aa18.81■□□□□ 0.6
GTF2IRD1-205ENST00000476977 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
GTF2IRD1-205ENST00000476977 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
GTF2IRD1-205ENST00000476977 APBB1O00213 710 aa18.8■□□□□ 0.6
GTF2IRD1-205ENST00000476977 BECN1Q14457 450 aa18.79■□□□□ 0.6
GTF2IRD1-205ENST00000476977 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
GTF2IRD1-205ENST00000476977 TRAK1Q9UPV9 953 aa18.79■□□□□ 0.6
GTF2IRD1-205ENST00000476977 GOLGA6L22H0YM25 854 aa18.79■□□□□ 0.6
GTF2IRD1-205ENST00000476977 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
GTF2IRD1-205ENST00000476977 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
GTF2IRD1-205ENST00000476977 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
GTF2IRD1-205ENST00000476977 GNL2Q13823 731 aaKnown RBP18.78■□□□□ 0.6
GTF2IRD1-205ENST00000476977 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
GTF2IRD1-205ENST00000476977 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
GTF2IRD1-205ENST00000476977 FBXW7Q969H0 707 aa18.76■□□□□ 0.59
GTF2IRD1-205ENST00000476977 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
GTF2IRD1-205ENST00000476977 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
GTF2IRD1-205ENST00000476977 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
GTF2IRD1-205ENST00000476977 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
GTF2IRD1-205ENST00000476977 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
GTF2IRD1-205ENST00000476977 KRI1Q8N9T8 703 aaKnown RBP18.71■□□□□ 0.59
GTF2IRD1-205ENST00000476977 CTDP1Q9Y5B0 961 aaPredicted RBP18.71■□□□□ 0.59
GTF2IRD1-205ENST00000476977 PROSER2Q86WR7 435 aaPredicted RBP18.71■□□□□ 0.59
GTF2IRD1-205ENST00000476977 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.58
GTF2IRD1-205ENST00000476977 VPS53Q5VIR6 699 aa18.7■□□□□ 0.58
GTF2IRD1-205ENST00000476977 COG3Q96JB2 828 aa18.7■□□□□ 0.58
GTF2IRD1-205ENST00000476977 HDAC5Q9UQL6 1122 aa18.69■□□□□ 0.58
GTF2IRD1-205ENST00000476977 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
GTF2IRD1-205ENST00000476977 MCCP23508 829 aa18.67■□□□□ 0.58
GTF2IRD1-205ENST00000476977 RGS3P49796 1198 aa18.67■□□□□ 0.58
GTF2IRD1-205ENST00000476977 IPO8O15397 1037 aaKnown RBP18.67■□□□□ 0.58
GTF2IRD1-205ENST00000476977 MINK1Q8N4C8 1332 aaPredicted RBP18.67■□□□□ 0.58
GTF2IRD1-205ENST00000476977 KIAA1211Q6ZU35 1233 aa18.66■□□□□ 0.58
GTF2IRD1-205ENST00000476977 USP35Q9P2H5 1018 aa18.66■□□□□ 0.58
GTF2IRD1-205ENST00000476977 MPHOSPH9Q99550 1183 aa18.66■□□□□ 0.58
GTF2IRD1-205ENST00000476977 TOMM22Q9NS69 142 aa18.66■□□□□ 0.58
GTF2IRD1-205ENST00000476977 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
GTF2IRD1-205ENST00000476977 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
GTF2IRD1-205ENST00000476977 PRM3Q9NNZ6 103 aa18.66■□□□□ 0.58
GTF2IRD1-205ENST00000476977 RAD21O60216 631 aa18.65■□□□□ 0.58
GTF2IRD1-205ENST00000476977 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
GTF2IRD1-205ENST00000476977 MROH2BQ7Z745 1585 aa18.65■□□□□ 0.58
GTF2IRD1-205ENST00000476977 TEFQ10587 303 aa18.64■□□□□ 0.57
GTF2IRD1-205ENST00000476977 GOLGA6L4A6NEF3 574 aa18.64■□□□□ 0.57
GTF2IRD1-205ENST00000476977 NOL10Q9BSC4 688 aaKnown RBP18.63■□□□□ 0.57
GTF2IRD1-205ENST00000476977 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
GTF2IRD1-205ENST00000476977 RAPGEF2Q9Y4G8 1499 aa18.63■□□□□ 0.57
GTF2IRD1-205ENST00000476977 GPATCH3Q96I76 525 aa18.62■□□□□ 0.57
GTF2IRD1-205ENST00000476977 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
GTF2IRD1-205ENST00000476977 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
GTF2IRD1-205ENST00000476977 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
GTF2IRD1-205ENST00000476977 PLCB2Q00722 1185 aa18.58■□□□□ 0.57
GTF2IRD1-205ENST00000476977 UACAQ9BZF9 1416 aa18.58■□□□□ 0.57
GTF2IRD1-205ENST00000476977 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
GTF2IRD1-205ENST00000476977 PTMAP06454 111 aaKnown RBP18.58■□□□□ 0.56
GTF2IRD1-205ENST00000476977 STRN4Q9NRL3 753 aa18.58■□□□□ 0.56
GTF2IRD1-205ENST00000476977 RAPGEF4Q8WZA2 1011 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms