RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.16
SNRPE-205ENST00000475035 RAPGEF3O95398 923 aa14.02□□□□□ -0.17
SNRPE-205ENST00000475035 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
SNRPE-205ENST00000475035 PLCH2O75038 1416 aa13.99□□□□□ -0.17
SNRPE-205ENST00000475035 ZMYM4Q5VZL5 1548 aa13.97□□□□□ -0.17
SNRPE-205ENST00000475035 ARHGAP5Q13017 1502 aa13.96□□□□□ -0.17
SNRPE-205ENST00000475035 POGZQ7Z3K3 1410 aa13.95□□□□□ -0.18
SNRPE-205ENST00000475035 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
SNRPE-205ENST00000475035 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
SNRPE-205ENST00000475035 PREX2Q70Z35 1606 aa13.94□□□□□ -0.18
SNRPE-205ENST00000475035 EFCAB2Q5VUJ9 269 aa13.94□□□□□ -0.18
SNRPE-205ENST00000475035 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
SNRPE-205ENST00000475035 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
SNRPE-205ENST00000475035 MAGI2Q86UL8 1455 aa13.93□□□□□ -0.18
SNRPE-205ENST00000475035 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
SNRPE-205ENST00000475035 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
SNRPE-205ENST00000475035 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
SNRPE-205ENST00000475035 ADAMTSL3P82987 1691 aa13.91□□□□□ -0.18
SNRPE-205ENST00000475035 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
SNRPE-205ENST00000475035 CDC42BPAQ5VT25 1732 aa13.9□□□□□ -0.18
SNRPE-205ENST00000475035 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
SNRPE-205ENST00000475035 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
SNRPE-205ENST00000475035 YEATS2Q9ULM3 1422 aa13.88□□□□□ -0.19
SNRPE-205ENST00000475035 KDM5CP41229 1560 aa13.88□□□□□ -0.19
SNRPE-205ENST00000475035 ABCC1P33527 1531 aa13.87□□□□□ -0.19
SNRPE-205ENST00000475035 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
SNRPE-205ENST00000475035 MTUS2Q5JR59 1369 aa13.86□□□□□ -0.19
SNRPE-205ENST00000475035 HECW2Q9P2P5 1572 aa13.86□□□□□ -0.19
SNRPE-205ENST00000475035 PTPRMP28827 1452 aa13.85□□□□□ -0.19
SNRPE-205ENST00000475035 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
SNRPE-205ENST00000475035 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
SNRPE-205ENST00000475035 SIGLEC1Q9BZZ2 1709 aa13.84□□□□□ -0.19
SNRPE-205ENST00000475035 C9orf84Q5VXU9 1444 aa13.84□□□□□ -0.19
SNRPE-205ENST00000475035 ATP10AO60312 1499 aa13.83□□□□□ -0.2
SNRPE-205ENST00000475035 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.2
SNRPE-205ENST00000475035 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
SNRPE-205ENST00000475035 CCNB3Q8WWL7 1395 aa13.82□□□□□ -0.2
SNRPE-205ENST00000475035 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
SNRPE-205ENST00000475035 SAMD9LQ8IVG5 1584 aa13.81□□□□□ -0.2
SNRPE-205ENST00000475035 SYCP2Q9BX26 1530 aa13.8□□□□□ -0.2
SNRPE-205ENST00000475035 DIP2CQ9Y2E4 1556 aa13.8□□□□□ -0.2
SNRPE-205ENST00000475035 ABCA6Q8N139 1617 aa13.8□□□□□ -0.2
SNRPE-205ENST00000475035 AFAP1Q8N556 730 aa13.8□□□□□ -0.2
SNRPE-205ENST00000475035 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
SNRPE-205ENST00000475035 ARHGEF12Q9NZN5 1544 aa13.8□□□□□ -0.2
SNRPE-205ENST00000475035 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
SNRPE-205ENST00000475035 TRAPPC8Q9Y2L5 1435 aa13.79□□□□□ -0.2
SNRPE-205ENST00000475035 PLEKHH2Q8IVE3 1493 aa13.79□□□□□ -0.2
SNRPE-205ENST00000475035 TIAM1Q13009 1591 aa13.79□□□□□ -0.2
SNRPE-205ENST00000475035 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
SNRPE-205ENST00000475035 SUPT6HQ7KZ85 1726 aaKnown RBP13.78□□□□□ -0.2
SNRPE-205ENST00000475035 LOC105371045A0A1W2PR82 267 aa13.78□□□□□ -0.2
SNRPE-205ENST00000475035 VPS8Q8N3P4 1428 aa13.78□□□□□ -0.2
SNRPE-205ENST00000475035 MLECQ14165 292 aa13.77□□□□□ -0.21
SNRPE-205ENST00000475035 CFDP1Q9UEE9 299 aaPredicted RBP13.77□□□□□ -0.21
SNRPE-205ENST00000475035 KIDINS220Q9ULH0 1771 aa13.77□□□□□ -0.21
SNRPE-205ENST00000475035 KIAA1107Q9UPP5 1409 aa13.75□□□□□ -0.21
SNRPE-205ENST00000475035 ATP7AQ04656 1500 aa13.73□□□□□ -0.21
SNRPE-205ENST00000475035 SPAG9O60271 1321 aaKnown RBP13.72□□□□□ -0.21
SNRPE-205ENST00000475035 INO80Q9ULG1 1556 aaPredicted RBP13.72□□□□□ -0.21
SNRPE-205ENST00000475035 AGLP35573 1532 aa13.72□□□□□ -0.21
SNRPE-205ENST00000475035 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
SNRPE-205ENST00000475035 HNRNPMP52272 730 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNRPE-205ENST00000475035 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
SNRPE-205ENST00000475035 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
SNRPE-205ENST00000475035 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
SNRPE-205ENST00000475035 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
SNRPE-205ENST00000475035 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
SNRPE-205ENST00000475035 ESF1Q9H501 851 aaKnown RBP13.67□□□□□ -0.22
SNRPE-205ENST00000475035 CAMSAP2Q08AD1 1489 aa13.67□□□□□ -0.22
SNRPE-205ENST00000475035 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
SNRPE-205ENST00000475035 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
SNRPE-205ENST00000475035 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
SNRPE-205ENST00000475035 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
SNRPE-205ENST00000475035 C3P01024 1663 aa13.65□□□□□ -0.22
SNRPE-205ENST00000475035 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
SNRPE-205ENST00000475035 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
SNRPE-205ENST00000475035 A2MP01023 1474 aa13.64□□□□□ -0.23
SNRPE-205ENST00000475035 MAPK8IP2Q13387 824 aaPredicted RBP13.64□□□□□ -0.23
SNRPE-205ENST00000475035 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
SNRPE-205ENST00000475035 APLP2Q06481 763 aa13.63□□□□□ -0.23
SNRPE-205ENST00000475035 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
SNRPE-205ENST00000475035 ARHGEF5Q12774 1597 aa13.62□□□□□ -0.23
SNRPE-205ENST00000475035 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
SNRPE-205ENST00000475035 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
SNRPE-205ENST00000475035 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
SNRPE-205ENST00000475035 CLTCQ00610 1675 aaKnown RBP13.59□□□□□ -0.23
SNRPE-205ENST00000475035 MYOM3Q5VTT5 1437 aa13.59□□□□□ -0.23
SNRPE-205ENST00000475035 HSPA2P54652 639 aa13.59□□□□□ -0.23
SNRPE-205ENST00000475035 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
SNRPE-205ENST00000475035 RSPH4AQ5TD94 716 aa13.59□□□□□ -0.23
SNRPE-205ENST00000475035 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
SNRPE-205ENST00000475035 MIA2Q96PC5 1412 aa13.57□□□□□ -0.24
SNRPE-205ENST00000475035 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
SNRPE-205ENST00000475035 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
SNRPE-205ENST00000475035 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
SNRPE-205ENST00000475035 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
SNRPE-205ENST00000475035 MAST1Q9Y2H9 1570 aa13.55□□□□□ -0.24
SNRPE-205ENST00000475035 GGT6Q6P531 493 aa13.55□□□□□ -0.24
SNRPE-205ENST00000475035 NPATQ14207 1427 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms