RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PLCH2O75038 1416 aa33.78■■■■□ 3
APP-215ENST00000474136 CERKQ8TCT0 537 aa33.77■■■■□ 3
APP-215ENST00000474136 FER1L4A9Z1Z3 1794 aa33.71■■■□□ 2.99
APP-215ENST00000474136 ATP1B4Q9UN42 357 aaPredicted RBP33.69■■■□□ 2.98
APP-215ENST00000474136 ATP10AO60312 1499 aa33.69■■■□□ 2.98
APP-215ENST00000474136 CEBPAP49715 358 aaPredicted RBP33.67■■■□□ 2.98
APP-215ENST00000474136 ARHGEF12Q9NZN5 1544 aa33.67■■■□□ 2.98
APP-215ENST00000474136 EFCAB2Q5VUJ9 269 aa33.65■■■□□ 2.98
APP-215ENST00000474136 EHMT2Q96KQ7 1210 aa33.65■■■□□ 2.98
APP-215ENST00000474136 C9orf84Q5VXU9 1444 aa33.65■■■□□ 2.98
APP-215ENST00000474136 AFAP1Q8N556 730 aa33.56■■■□□ 2.96
APP-215ENST00000474136 MYO5CQ9NQX4 1742 aa33.54■■■□□ 2.96
APP-215ENST00000474136 KIF14Q15058 1648 aa33.54■■■□□ 2.96
APP-215ENST00000474136 UBTFP17480 764 aaKnown RBP33.53■■■□□ 2.96
APP-215ENST00000474136 FMN1Q68DA7 1419 aa33.53■■■□□ 2.96
APP-215ENST00000474136 CDK11AQ9UQ88 783 aaPredicted RBP33.53■■■□□ 2.96
APP-215ENST00000474136 PREX1Q8TCU6 1659 aa33.53■■■□□ 2.96
APP-215ENST00000474136 ZNF518AQ6AHZ1 1483 aa33.51■■■□□ 2.96
APP-215ENST00000474136 ARHGAP35Q9NRY4 1499 aa33.5■■■□□ 2.95
APP-215ENST00000474136 MYT1LQ9UL68 1186 aa33.49■■■□□ 2.95
APP-215ENST00000474136 ARHGAP5Q13017 1502 aa33.48■■■□□ 2.95
APP-215ENST00000474136 TROQ12816 1431 aaPredicted RBP33.47■■■□□ 2.95
APP-215ENST00000474136 KDM5CP41229 1560 aa33.46■■■□□ 2.95
APP-215ENST00000474136 UHRF1BP1Q6BDS2 1440 aa33.44■■■□□ 2.94
APP-215ENST00000474136 STRCQ7RTU9 1775 aa33.43■■■□□ 2.94
APP-215ENST00000474136 DMRT2Q9Y5R5 561 aa33.43■■■□□ 2.94
APP-215ENST00000474136 DIP2CQ9Y2E4 1556 aa33.41■■■□□ 2.94
APP-215ENST00000474136 CLIP1P30622 1438 aa33.39■■■□□ 2.94
APP-215ENST00000474136 ILDR2Q71H61 639 aa33.36■■■□□ 2.93
APP-215ENST00000474136 DISP3Q9P2K9 1392 aa33.35■■■□□ 2.93
APP-215ENST00000474136 ABCA6Q8N139 1617 aa33.34■■■□□ 2.93
APP-215ENST00000474136 TRAPPC8Q9Y2L5 1435 aa33.34■■■□□ 2.93
APP-215ENST00000474136 MLH3Q9UHC1 1453 aa33.33■■■□□ 2.93
APP-215ENST00000474136 REREQ9P2R6 1566 aa33.32■■■□□ 2.93
APP-215ENST00000474136 SETD1BQ9UPS6 1966 aaKnown RBP33.32■■■□□ 2.92
APP-215ENST00000474136 LRRIQ1Q96JM4 1722 aa33.3■■■□□ 2.92
APP-215ENST00000474136 CDC42BPBQ9Y5S2 1711 aa33.29■■■□□ 2.92
APP-215ENST00000474136 PTPRTO14522 1441 aa33.28■■■□□ 2.92
APP-215ENST00000474136 C3P01024 1663 aa33.28■■■□□ 2.92
APP-215ENST00000474136 ESF1Q9H501 851 aaKnown RBP33.28■■■□□ 2.92
APP-215ENST00000474136 AGLP35573 1532 aa33.26■■■□□ 2.91
APP-215ENST00000474136 ABCC1P33527 1531 aa33.25■■■□□ 2.91
APP-215ENST00000474136 PREX2Q70Z35 1606 aa33.21■■■□□ 2.91
APP-215ENST00000474136 ITSN2Q9NZM3 1697 aa33.17■■■□□ 2.9
APP-215ENST00000474136 LTBP4Q8N2S1 1624 aa33.17■■■□□ 2.9
APP-215ENST00000474136 SOCS7O14512 581 aa33.16■■■□□ 2.9
APP-215ENST00000474136 KIDINS220Q9ULH0 1771 aa33.16■■■□□ 2.9
APP-215ENST00000474136 NCOA1Q15788 1441 aa33.15■■■□□ 2.9
APP-215ENST00000474136 CASKIN1Q8WXD9 1431 aa33.14■■■□□ 2.9
APP-215ENST00000474136 CNTLNQ9NXG0 1405 aa33.13■■■□□ 2.89
APP-215ENST00000474136 CCDC18Q5T9S5 1454 aa33.11■■■□□ 2.89
APP-215ENST00000474136 ZNF777Q9ULD5 760 aaPredicted RBP33.11■■■□□ 2.89
APP-215ENST00000474136 CHIC1Q5VXU3 224 aa33.09■■■□□ 2.89
APP-215ENST00000474136 SAMD9LQ8IVG5 1584 aa33.07■■■□□ 2.88
APP-215ENST00000474136 SPATA31D1Q6ZQQ2 1576 aa33.06■■■□□ 2.88
APP-215ENST00000474136 CDC42BPAQ5VT25 1732 aa33.06■■■□□ 2.88
APP-215ENST00000474136 ZMYM3Q14202 1370 aa33.05■■■□□ 2.88
APP-215ENST00000474136 CAMSAP1Q5T5Y3 1602 aa33.04■■■□□ 2.88
APP-215ENST00000474136 HNRNPMP52272 730 aaKnown RBP eCLIP33.03■■■□□ 2.881e-6■□□□□ 11.1
APP-215ENST00000474136 NCKAP5LQ9HCH0 1330 aa33.03■■■□□ 2.88
APP-215ENST00000474136 NPATQ14207 1427 aa33.03■■■□□ 2.88
APP-215ENST00000474136 SPAG9O60271 1321 aaKnown RBP33.02■■■□□ 2.88
APP-215ENST00000474136 IQSEC2Q5JU85 1478 aa33.01■■■□□ 2.88
APP-215ENST00000474136 SYCP2Q9BX26 1530 aa33.01■■■□□ 2.87
APP-215ENST00000474136 GPATCH8Q9UKJ3 1502 aaKnown RBP32.98■■■□□ 2.87
APP-215ENST00000474136 ZNF335Q9H4Z2 1342 aaPredicted RBP32.96■■■□□ 2.87
APP-215ENST00000474136 MROH2AA6NES4 1674 aa32.96■■■□□ 2.87
APP-215ENST00000474136 FYCO1Q9BQS8 1478 aa32.94■■■□□ 2.86
APP-215ENST00000474136 SUPT6HQ7KZ85 1726 aaKnown RBP32.94■■■□□ 2.86
APP-215ENST00000474136 ATP7AQ04656 1500 aa32.9■■■□□ 2.86
APP-215ENST00000474136 GGT6Q6P531 493 aa32.89■■■□□ 2.86
APP-215ENST00000474136 UBAP1LF5GYI3 381 aa32.88■■■□□ 2.85
APP-215ENST00000474136 A2MP01023 1474 aa32.88■■■□□ 2.85
APP-215ENST00000474136 CLTCQ00610 1675 aaKnown RBP32.88■■■□□ 2.85
APP-215ENST00000474136 CFDP1Q9UEE9 299 aaPredicted RBP32.88■■■□□ 2.85
APP-215ENST00000474136 PTPRKQ15262 1439 aa32.87■■■□□ 2.85
APP-215ENST00000474136 KIAA1107Q9UPP5 1409 aa32.87■■■□□ 2.85
APP-215ENST00000474136 PLXNC1O60486 1568 aa32.87■■■□□ 2.85
APP-215ENST00000474136 MYO3AQ8NEV4 1616 aa32.84■■■□□ 2.85
APP-215ENST00000474136 PKD2Q13563 968 aa32.84■■■□□ 2.85
APP-215ENST00000474136 INO80Q9ULG1 1556 aaPredicted RBP32.83■■■□□ 2.85
APP-215ENST00000474136 PLA2R1Q13018 1463 aa32.83■■■□□ 2.85
APP-215ENST00000474136 CCNB3Q8WWL7 1395 aa32.82■■■□□ 2.84
APP-215ENST00000474136 PLEKHH2Q8IVE3 1493 aa32.81■■■□□ 2.84
APP-215ENST00000474136 CEP170BQ9Y4F5 1589 aaPredicted RBP32.81■■■□□ 2.84
APP-215ENST00000474136 TCOF1Q13428 1488 aaKnown RBP32.81■■■□□ 2.84
APP-215ENST00000474136 ZNF142P52746 1687 aaPredicted RBP32.8■■■□□ 2.84
APP-215ENST00000474136 ZNF644Q9H582 1327 aaPredicted RBP32.77■■■□□ 2.84
APP-215ENST00000474136 PPP6R1Q9UPN7 881 aa32.76■■■□□ 2.83
APP-215ENST00000474136 MTUS2Q5JR59 1369 aa32.72■■■□□ 2.83
APP-215ENST00000474136 A2ML1A8K2U0 1454 aa32.67■■■□□ 2.82
APP-215ENST00000474136 MBD5Q9P267 1494 aa32.66■■■□□ 2.82
APP-215ENST00000474136 ADGBQ8N7X0 1667 aa32.65■■■□□ 2.82
APP-215ENST00000474136 FBXO31Q5XUX0 539 aaPredicted RBP32.64■■■□□ 2.82
APP-215ENST00000474136 DNMT1P26358 1616 aaKnown RBP32.63■■■□□ 2.81
APP-215ENST00000474136 TIAM1Q13009 1591 aa32.62■■■□□ 2.81
APP-215ENST00000474136 DHX29Q7Z478 1369 aaKnown RBP32.61■■■□□ 2.81
APP-215ENST00000474136 SCAF1Q9H7N4 1312 aaKnown RBP32.6■■■□□ 2.81
APP-215ENST00000474136 HSPA1LP34931 641 aa32.59■■■□□ 2.81
APP-215ENST00000474136 PIP4K2BP78356 416 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms