RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CFAP74Q9C0B2 1584 aa16.25■□□□□ 0.19
MCF2L-223ENST00000473345 KIF14Q15058 1648 aa16.23■□□□□ 0.19
MCF2L-223ENST00000473345 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
MCF2L-223ENST00000473345 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
MCF2L-223ENST00000473345 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
MCF2L-223ENST00000473345 CEBPAP49715 358 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-223ENST00000473345 FER1L4A9Z1Z3 1794 aa16.19■□□□□ 0.18
MCF2L-223ENST00000473345 LRRIQ1Q96JM4 1722 aa16.18■□□□□ 0.18
MCF2L-223ENST00000473345 ATP10AO60312 1499 aa16.17■□□□□ 0.18
MCF2L-223ENST00000473345 AFAP1Q8N556 730 aa16.16■□□□□ 0.18
MCF2L-223ENST00000473345 C9orf84Q5VXU9 1444 aa16.16■□□□□ 0.18
MCF2L-223ENST00000473345 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
MCF2L-223ENST00000473345 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-223ENST00000473345 KDM5CP41229 1560 aa16.13■□□□□ 0.17
MCF2L-223ENST00000473345 MYO5CQ9NQX4 1742 aa16.13■□□□□ 0.17
MCF2L-223ENST00000473345 DIP2CQ9Y2E4 1556 aa16.13■□□□□ 0.17
MCF2L-223ENST00000473345 TROQ12816 1431 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-223ENST00000473345 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
MCF2L-223ENST00000473345 STRCQ7RTU9 1775 aa16.12■□□□□ 0.17
MCF2L-223ENST00000473345 FMN1Q68DA7 1419 aa16.11■□□□□ 0.17
MCF2L-223ENST00000473345 UBTFP17480 764 aaKnown RBP16.1■□□□□ 0.17
MCF2L-223ENST00000473345 TRAPPC8Q9Y2L5 1435 aa16.1■□□□□ 0.17
MCF2L-223ENST00000473345 ABCA6Q8N139 1617 aa16.09■□□□□ 0.17
MCF2L-223ENST00000473345 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
MCF2L-223ENST00000473345 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
MCF2L-223ENST00000473345 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.17
MCF2L-223ENST00000473345 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.17
MCF2L-223ENST00000473345 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
MCF2L-223ENST00000473345 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
MCF2L-223ENST00000473345 ABCC1P33527 1531 aa16.04■□□□□ 0.16
MCF2L-223ENST00000473345 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
MCF2L-223ENST00000473345 C3P01024 1663 aa16.03■□□□□ 0.16
MCF2L-223ENST00000473345 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
MCF2L-223ENST00000473345 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
MCF2L-223ENST00000473345 UHRF1BP1Q6BDS2 1440 aa16.01■□□□□ 0.15
MCF2L-223ENST00000473345 KIDINS220Q9ULH0 1771 aa16■□□□□ 0.15
MCF2L-223ENST00000473345 AGLP35573 1532 aa16■□□□□ 0.15
MCF2L-223ENST00000473345 ITSN2Q9NZM3 1697 aa16■□□□□ 0.15
MCF2L-223ENST00000473345 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
MCF2L-223ENST00000473345 CLIP1P30622 1438 aa15.99■□□□□ 0.15
MCF2L-223ENST00000473345 LTBP4Q8N2S1 1624 aa15.98■□□□□ 0.15
MCF2L-223ENST00000473345 CASKIN1Q8WXD9 1431 aa15.98■□□□□ 0.15
MCF2L-223ENST00000473345 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
MCF2L-223ENST00000473345 SAMD9LQ8IVG5 1584 aa15.96■□□□□ 0.15
MCF2L-223ENST00000473345 MYT1LQ9UL68 1186 aa15.96■□□□□ 0.15
MCF2L-223ENST00000473345 PTPRTO14522 1441 aa15.94■□□□□ 0.14
MCF2L-223ENST00000473345 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
MCF2L-223ENST00000473345 GPATCH8Q9UKJ3 1502 aaKnown RBP15.93■□□□□ 0.14
MCF2L-223ENST00000473345 SYCP2Q9BX26 1530 aa15.92■□□□□ 0.14
MCF2L-223ENST00000473345 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
MCF2L-223ENST00000473345 DISP3Q9P2K9 1392 aa15.9■□□□□ 0.14
MCF2L-223ENST00000473345 SETD1BQ9UPS6 1966 aaKnown RBP15.9■□□□□ 0.14
MCF2L-223ENST00000473345 HNRNPMP52272 730 aaKnown RBP eCLIP15.9■□□□□ 0.14
MCF2L-223ENST00000473345 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-223ENST00000473345 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
MCF2L-223ENST00000473345 ZMYM3Q14202 1370 aa15.87■□□□□ 0.13
MCF2L-223ENST00000473345 PLXNC1O60486 1568 aa15.87■□□□□ 0.13
MCF2L-223ENST00000473345 CAMSAP1Q5T5Y3 1602 aa15.87■□□□□ 0.13
MCF2L-223ENST00000473345 FYCO1Q9BQS8 1478 aa15.87■□□□□ 0.13
MCF2L-223ENST00000473345 NCKAP5LQ9HCH0 1330 aa15.87■□□□□ 0.13
MCF2L-223ENST00000473345 INO80Q9ULG1 1556 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-223ENST00000473345 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
MCF2L-223ENST00000473345 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
MCF2L-223ENST00000473345 ZNF335Q9H4Z2 1342 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-223ENST00000473345 ZNF644Q9H582 1327 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-223ENST00000473345 NPATQ14207 1427 aa15.85■□□□□ 0.13
MCF2L-223ENST00000473345 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
MCF2L-223ENST00000473345 MROH2AA6NES4 1674 aa15.84■□□□□ 0.13
MCF2L-223ENST00000473345 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
MCF2L-223ENST00000473345 PTPRKQ15262 1439 aa15.84■□□□□ 0.13
MCF2L-223ENST00000473345 CLTCQ00610 1675 aaKnown RBP15.83■□□□□ 0.13
MCF2L-223ENST00000473345 ESF1Q9H501 851 aaKnown RBP15.82■□□□□ 0.12
MCF2L-223ENST00000473345 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
MCF2L-223ENST00000473345 A2MP01023 1474 aa15.81■□□□□ 0.12
MCF2L-223ENST00000473345 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
MCF2L-223ENST00000473345 KIAA1107Q9UPP5 1409 aa15.81■□□□□ 0.12
MCF2L-223ENST00000473345 SOCS7O14512 581 aa15.8■□□□□ 0.12
MCF2L-223ENST00000473345 TCOF1Q13428 1488 aaKnown RBP15.79■□□□□ 0.12
MCF2L-223ENST00000473345 MBD5Q9P267 1494 aa15.79■□□□□ 0.12
MCF2L-223ENST00000473345 ZNF142P52746 1687 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-223ENST00000473345 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
MCF2L-223ENST00000473345 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-223ENST00000473345 CEP170BQ9Y4F5 1589 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-223ENST00000473345 GGT6Q6P531 493 aa15.77■□□□□ 0.12
MCF2L-223ENST00000473345 TIAM1Q13009 1591 aa15.77■□□□□ 0.11
MCF2L-223ENST00000473345 PLA2R1Q13018 1463 aa15.76■□□□□ 0.11
MCF2L-223ENST00000473345 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
MCF2L-223ENST00000473345 PLEKHH2Q8IVE3 1493 aa15.73■□□□□ 0.11
MCF2L-223ENST00000473345 FBXO31Q5XUX0 539 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-223ENST00000473345 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
MCF2L-223ENST00000473345 NEURL4Q96JN8 1562 aa15.71■□□□□ 0.11
MCF2L-223ENST00000473345 MTUS2Q5JR59 1369 aa15.71■□□□□ 0.11
MCF2L-223ENST00000473345 ADGBQ8N7X0 1667 aa15.7■□□□□ 0.1
MCF2L-223ENST00000473345 UBAP1LF5GYI3 381 aa15.7■□□□□ 0.1
MCF2L-223ENST00000473345 PKD2Q13563 968 aa15.7■□□□□ 0.1
MCF2L-223ENST00000473345 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
MCF2L-223ENST00000473345 DHX29Q7Z478 1369 aaKnown RBP15.68■□□□□ 0.1
MCF2L-223ENST00000473345 ALKQ9UM73 1620 aa15.67■□□□□ 0.1
MCF2L-223ENST00000473345 EHBP1L1Q8N3D4 1523 aa15.67■□□□□ 0.1
MCF2L-223ENST00000473345 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms