RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 MFRPQ9BY79 579 aa8.54□□□□□ -1.04
LRCH3-214ENST00000473177 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
LRCH3-214ENST00000473177 RIMBP3CA6NJZ7 1639 aa8.53□□□□□ -1.04
LRCH3-214ENST00000473177 RIMBP3BA6NNM3 1639 aa8.53□□□□□ -1.04
LRCH3-214ENST00000473177 RIMBP3Q9UFD9 1639 aa8.53□□□□□ -1.04
LRCH3-214ENST00000473177 TTLL13PA6NNM8 815 aa8.52□□□□□ -1.05
LRCH3-214ENST00000473177 ATN1P54259 1190 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-214ENST00000473177 BMP2KQ9NSY1 1161 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-214ENST00000473177 CADPSQ9ULU8 1353 aa8.51□□□□□ -1.05
LRCH3-214ENST00000473177 NLRP6P59044 892 aa8.5□□□□□ -1.05
LRCH3-214ENST00000473177 FBXO22Q8NEZ5 403 aa8.5□□□□□ -1.05
LRCH3-214ENST00000473177 CEP164Q9UPV0 1460 aa8.5□□□□□ -1.05
LRCH3-214ENST00000473177 ARHGEF11O15085 1522 aa8.49□□□□□ -1.05
LRCH3-214ENST00000473177 GOLGA2Q08379 1002 aa8.49□□□□□ -1.05
LRCH3-214ENST00000473177 CYB5RLQ6IPT4 315 aa8.48□□□□□ -1.05
LRCH3-214ENST00000473177 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
LRCH3-214ENST00000473177 PHF8Q9UPP1 1060 aa8.48□□□□□ -1.05
LRCH3-214ENST00000473177 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
LRCH3-214ENST00000473177 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
LRCH3-214ENST00000473177 PEG3Q9GZU2 1588 aa8.47□□□□□ -1.05
LRCH3-214ENST00000473177 TRIM35Q9UPQ4 493 aa8.46□□□□□ -1.06
LRCH3-214ENST00000473177 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
LRCH3-214ENST00000473177 FANCD2Q9BXW9 1451 aa8.44□□□□□ -1.06
LRCH3-214ENST00000473177 MS4A4AQ96JQ5 239 aa8.43□□□□□ -1.06
LRCH3-214ENST00000473177 POTEMA6NI47 508 aa8.42□□□□□ -1.06
LRCH3-214ENST00000473177 PPP1R37O75864 691 aa8.42□□□□□ -1.06
LRCH3-214ENST00000473177 SEC24BO95487 1268 aa8.42□□□□□ -1.06
LRCH3-214ENST00000473177 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
LRCH3-214ENST00000473177 PLSCR2Q9NRY7 297 aa8.42□□□□□ -1.06
LRCH3-214ENST00000473177 IER5LQ5T953 404 aa8.41□□□□□ -1.06
LRCH3-214ENST00000473177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.06
LRCH3-214ENST00000473177 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
LRCH3-214ENST00000473177 POTEGQ6S5H5 508 aa8.39□□□□□ -1.07
LRCH3-214ENST00000473177 MROH2BQ7Z745 1585 aa8.38□□□□□ -1.07
LRCH3-214ENST00000473177 CADPS2Q86UW7 1296 aa8.37□□□□□ -1.07
LRCH3-214ENST00000473177 ARAP1Q96P48 1450 aa8.37□□□□□ -1.07
LRCH3-214ENST00000473177 URB2Q14146 1524 aaKnown RBP8.36□□□□□ -1.07
LRCH3-214ENST00000473177 IRX5P78411 483 aaPredicted RBP8.36□□□□□ -1.07
LRCH3-214ENST00000473177 PDCD7Q8N8D1 485 aaKnown RBP8.35□□□□□ -1.07
LRCH3-214ENST00000473177 COLQQ9Y215 455 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-214ENST00000473177 OCEL1Q9H607 264 aa8.34□□□□□ -1.07
LRCH3-214ENST00000473177 PCDH10Q9P2E7 1040 aa8.33□□□□□ -1.08
LRCH3-214ENST00000473177 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-214ENST00000473177 IFT140Q96RY7 1462 aa8.32□□□□□ -1.08
LRCH3-214ENST00000473177 RSF1Q96T23 1441 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-214ENST00000473177 PLCG2P16885 1265 aa8.32□□□□□ -1.08
LRCH3-214ENST00000473177 CFTRP13569 1480 aa8.32□□□□□ -1.08
LRCH3-214ENST00000473177 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
LRCH3-214ENST00000473177 FAM163AQ96GL9 167 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-214ENST00000473177 BCANQ96GW7 911 aa8.29□□□□□ -1.08
LRCH3-214ENST00000473177 WDR70Q9NW82 654 aa8.28□□□□□ -1.08
LRCH3-214ENST00000473177 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
LRCH3-214ENST00000473177 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-214ENST00000473177 MICALL2Q8IY33 904 aa8.27□□□□□ -1.09
LRCH3-214ENST00000473177 TMEM121BQ9BXQ6 578 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-214ENST00000473177 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
LRCH3-214ENST00000473177 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
LRCH3-214ENST00000473177 PDE4AP27815 886 aa8.26□□□□□ -1.09
LRCH3-214ENST00000473177 BOLA1Q9Y3E2 137 aa8.26□□□□□ -1.09
LRCH3-214ENST00000473177 SLAIN1Q8ND83 568 aa8.25□□□□□ -1.09
LRCH3-214ENST00000473177 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
LRCH3-214ENST00000473177 WIZO95785 1651 aa8.24□□□□□ -1.09
LRCH3-214ENST00000473177 MFSD10Q14728 455 aa8.24□□□□□ -1.09
LRCH3-214ENST00000473177 P3H3Q8IVL6 736 aa8.24□□□□□ -1.09
LRCH3-214ENST00000473177 CHD1O14646 1710 aa8.23□□□□□ -1.09
LRCH3-214ENST00000473177 G3V3G9 751 aa8.22□□□□□ -1.09
LRCH3-214ENST00000473177 LARP6Q9BRS8 491 aaKnown RBP8.22□□□□□ -1.09
LRCH3-214ENST00000473177 GPHNQ9NQX3 736 aaPredicted RBP8.22□□□□□ -1.09
LRCH3-214ENST00000473177 AQRO60306 1485 aaKnown RBP eCLIP8.21□□□□□ -1.092e-6■■■□□ 18.4
LRCH3-214ENST00000473177 DDX27Q96GQ7 796 aaKnown RBP8.21□□□□□ -1.1
LRCH3-214ENST00000473177 TOPBP1Q92547 1522 aa8.2□□□□□ -1.1
LRCH3-214ENST00000473177 KCNV2Q8TDN2 545 aa8.2□□□□□ -1.1
LRCH3-214ENST00000473177 E2F4Q16254 413 aa8.19□□□□□ -1.1
LRCH3-214ENST00000473177 NBR1Q14596 966 aa8.18□□□□□ -1.1
LRCH3-214ENST00000473177 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.18□□□□□ -1.1
LRCH3-214ENST00000473177 ABCC8Q09428 1581 aa8.18□□□□□ -1.1
LRCH3-214ENST00000473177 TMC2Q8TDI7 906 aa8.17□□□□□ -1.1
LRCH3-214ENST00000473177 SYNJ1O43426 1573 aa8.17□□□□□ -1.1
LRCH3-214ENST00000473177 KIF3CO14782 793 aa8.16□□□□□ -1.1
LRCH3-214ENST00000473177 CAMK2BQ13554 666 aa8.16□□□□□ -1.1
LRCH3-214ENST00000473177 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
LRCH3-214ENST00000473177 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-214ENST00000473177 ARHGEF1Q92888 912 aaKnown RBP8.16□□□□□ -1.1
LRCH3-214ENST00000473177 TOP2AP11388 1531 aaKnown RBP8.15□□□□□ -1.1
LRCH3-214ENST00000473177 CLASP1Q7Z460 1538 aa8.15□□□□□ -1.1
LRCH3-214ENST00000473177 GAPVD1Q14C86 1478 aa8.15□□□□□ -1.1
LRCH3-214ENST00000473177 SNPHO15079 494 aa8.15□□□□□ -1.1
LRCH3-214ENST00000473177 FOXK1P85037 733 aa8.15□□□□□ -1.1
LRCH3-214ENST00000473177 SNAPC4Q5SXM2 1469 aa8.14□□□□□ -1.11
LRCH3-214ENST00000473177 C2orf72A6NCS6 295 aa8.14□□□□□ -1.11
LRCH3-214ENST00000473177 DSG2Q14126 1118 aa8.14□□□□□ -1.11
LRCH3-214ENST00000473177 C3orf67Q6ZVT6 689 aa8.14□□□□□ -1.11
LRCH3-214ENST00000473177 ARIH1Q9Y4X5 557 aaPredicted RBP8.14□□□□□ -1.11
LRCH3-214ENST00000473177 DNMBPQ6XZF7 1577 aa8.14□□□□□ -1.11
LRCH3-214ENST00000473177 ST18O60284 1047 aa8.13□□□□□ -1.11
LRCH3-214ENST00000473177 TARBP1Q13395 1621 aaKnown RBP8.12□□□□□ -1.11
LRCH3-214ENST00000473177 TMEM92Q6UXU6 159 aa8.12□□□□□ -1.11
LRCH3-214ENST00000473177 CDAN1Q8IWY9 1227 aa8.12□□□□□ -1.11
LRCH3-214ENST00000473177 PRDM2Q13029 1718 aa8.12□□□□□ -1.11
LRCH3-214ENST00000473177 TDRD9Q8NDG6 1382 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms