RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 ADCY10Q96PN6 1610 aa24.99■■□□□ 1.59
RRP1-202ENST00000471909 GPATCH8Q9UKJ3 1502 aaKnown RBP24.99■■□□□ 1.59
RRP1-202ENST00000471909 KDM6BO15054 1643 aa24.99■■□□□ 1.59
RRP1-202ENST00000471909 DNMT1P26358 1616 aaKnown RBP24.98■■□□□ 1.59
RRP1-202ENST00000471909 PTPRGP23470 1445 aa24.98■■□□□ 1.59
RRP1-202ENST00000471909 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
RRP1-202ENST00000471909 ROCK1Q13464 1354 aa24.97■■□□□ 1.59
RRP1-202ENST00000471909 PLEKHD1A6NEE1 506 aa24.95■■□□□ 1.59
RRP1-202ENST00000471909 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
RRP1-202ENST00000471909 CAMSAP2Q08AD1 1489 aa24.94■■□□□ 1.58
RRP1-202ENST00000471909 ITSN2Q9NZM3 1697 aa24.93■■□□□ 1.58
RRP1-202ENST00000471909 DENND4BO75064 1496 aaPredicted RBP24.92■■□□□ 1.58
RRP1-202ENST00000471909 TRIM52Q96A61 297 aa24.91■■□□□ 1.58
RRP1-202ENST00000471909 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
RRP1-202ENST00000471909 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
RRP1-202ENST00000471909 ABCC10Q5T3U5 1492 aa24.88■■□□□ 1.57
RRP1-202ENST00000471909 ZNF777Q9ULD5 760 aaPredicted RBP24.87■■□□□ 1.57
RRP1-202ENST00000471909 MPHOSPH9Q99550 1183 aa24.85■■□□□ 1.57
RRP1-202ENST00000471909 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
RRP1-202ENST00000471909 CDC42BPAQ5VT25 1732 aa24.8■■□□□ 1.56
RRP1-202ENST00000471909 NCOA1Q15788 1441 aa24.8■■□□□ 1.56
RRP1-202ENST00000471909 KDM5BQ9UGL1 1544 aa24.77■■□□□ 1.56
RRP1-202ENST00000471909 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
RRP1-202ENST00000471909 CROCC2H7BZ55 1655 aa24.75■■□□□ 1.55
RRP1-202ENST00000471909 FOXD1Q16676 465 aa24.74■■□□□ 1.55
RRP1-202ENST00000471909 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
RRP1-202ENST00000471909 ADGBQ8N7X0 1667 aa24.73■■□□□ 1.55
RRP1-202ENST00000471909 ANKRD30AQ9BXX3 1397 aa24.71■■□□□ 1.55
RRP1-202ENST00000471909 ABCC2Q92887 1545 aa24.7■■□□□ 1.54
RRP1-202ENST00000471909 ANKRD30BQ9BXX2 1392 aa24.69■■□□□ 1.54
RRP1-202ENST00000471909 HIRIP3Q9BW71 556 aaPredicted RBP24.69■■□□□ 1.54
RRP1-202ENST00000471909 SLC4A1APQ9BWU0 796 aaKnown RBP24.68■■□□□ 1.54
RRP1-202ENST00000471909 SHANK2Q9UPX8 1470 aa24.67■■□□□ 1.54
RRP1-202ENST00000471909 C9orf84Q5VXU9 1444 aa24.66■■□□□ 1.54
RRP1-202ENST00000471909 PZPP20742 1482 aa24.65■■□□□ 1.54
RRP1-202ENST00000471909 HNRNPMP52272 730 aaKnown RBP eCLIP24.64■■□□□ 1.543e-10■■■■□ 19.6
RRP1-202ENST00000471909 MBD5Q9P267 1494 aa24.63■■□□□ 1.53
RRP1-202ENST00000471909 ANKRD50Q9ULJ7 1429 aa24.63■■□□□ 1.53
RRP1-202ENST00000471909 DDX10Q13206 875 aaKnown RBP24.63■■□□□ 1.53
RRP1-202ENST00000471909 PREX2Q70Z35 1606 aa24.62■■□□□ 1.53
RRP1-202ENST00000471909 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
RRP1-202ENST00000471909 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
RRP1-202ENST00000471909 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
RRP1-202ENST00000471909 ARHGEF5Q12774 1597 aa24.61■■□□□ 1.53
RRP1-202ENST00000471909 L3MBTL2Q969R5 705 aa24.61■■□□□ 1.53
RRP1-202ENST00000471909 RPRD2Q5VT52 1461 aaKnown RBP24.6■■□□□ 1.53
RRP1-202ENST00000471909 SAMD9LQ8IVG5 1584 aa24.6■■□□□ 1.53
RRP1-202ENST00000471909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.59■■□□□ 1.533e-8■□□□□ 10.1
RRP1-202ENST00000471909 TTC37Q6PGP7 1564 aa24.59■■□□□ 1.53
RRP1-202ENST00000471909 UHRF1BP1LA0JNW5 1464 aa24.56■■□□□ 1.52
RRP1-202ENST00000471909 SUPT16HQ9Y5B9 1047 aaKnown RBP24.56■■□□□ 1.52
RRP1-202ENST00000471909 CCDC141Q6ZP82 1450 aa24.54■■□□□ 1.52
RRP1-202ENST00000471909 KIF15Q9NS87 1388 aa24.53■■□□□ 1.52
RRP1-202ENST00000471909 RSPH4AQ5TD94 716 aa24.53■■□□□ 1.52
RRP1-202ENST00000471909 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
RRP1-202ENST00000471909 ARHGAP5Q13017 1502 aa24.52■■□□□ 1.52
RRP1-202ENST00000471909 KIAA1107Q9UPP5 1409 aa24.52■■□□□ 1.52
RRP1-202ENST00000471909 TEX14Q8IWB6 1497 aa24.52■■□□□ 1.52
RRP1-202ENST00000471909 ZCCHC11Q5TAX3 1644 aaKnown RBP24.52■■□□□ 1.52
RRP1-202ENST00000471909 PKD2Q13563 968 aa24.51■■□□□ 1.51
RRP1-202ENST00000471909 SYCP2Q9BX26 1530 aa24.49■■□□□ 1.51
RRP1-202ENST00000471909 NUP155O75694 1391 aa24.49■■□□□ 1.51
RRP1-202ENST00000471909 MYO5CQ9NQX4 1742 aa24.45■■□□□ 1.51
RRP1-202ENST00000471909 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.5
RRP1-202ENST00000471909 NBPF8Q3BBV2 869 aa24.45■■□□□ 1.5
RRP1-202ENST00000471909 KDM5DQ9BY66 1539 aa24.44■■□□□ 1.5
RRP1-202ENST00000471909 PLCH2O75038 1416 aa24.42■■□□□ 1.5
RRP1-202ENST00000471909 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
RRP1-202ENST00000471909 PLEKHH2Q8IVE3 1493 aa24.41■■□□□ 1.5
RRP1-202ENST00000471909 MAST1Q9Y2H9 1570 aa24.4■■□□□ 1.5
RRP1-202ENST00000471909 ARHGEF12Q9NZN5 1544 aa24.39■■□□□ 1.49
RRP1-202ENST00000471909 EFCAB2Q5VUJ9 269 aa24.36■■□□□ 1.49
RRP1-202ENST00000471909 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
RRP1-202ENST00000471909 ANP32CO43423 234 aa24.33■■□□□ 1.49
RRP1-202ENST00000471909 FAM135AQ9P2D6 1515 aa24.31■■□□□ 1.48
RRP1-202ENST00000471909 PLXNC1O60486 1568 aa24.31■■□□□ 1.48
RRP1-202ENST00000471909 ABCC1P33527 1531 aa24.29■■□□□ 1.48
RRP1-202ENST00000471909 WDR7Q9Y4E6 1490 aa24.29■■□□□ 1.48
RRP1-202ENST00000471909 TSHZ2Q9NRE2 1034 aa24.28■■□□□ 1.48
RRP1-202ENST00000471909 SPATA31E1Q6ZUB1 1445 aa24.28■■□□□ 1.48
RRP1-202ENST00000471909 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
RRP1-202ENST00000471909 CCER2I3L3R5 266 aa24.27■■□□□ 1.48
RRP1-202ENST00000471909 C11orf95C9JLR9 678 aaPredicted RBP24.26■■□□□ 1.47
RRP1-202ENST00000471909 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
RRP1-202ENST00000471909 UNC13BO14795 1591 aa24.26■■□□□ 1.47
RRP1-202ENST00000471909 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
RRP1-202ENST00000471909 DUOX2Q9NRD8 1548 aa24.24■■□□□ 1.47
RRP1-202ENST00000471909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.474e-6■■■□□ 18.9
RRP1-202ENST00000471909 ZNF326Q5BKZ1 582 aaKnown RBP24.22■■□□□ 1.47
RRP1-202ENST00000471909 CCDC7Q96M83 1385 aa24.21■■□□□ 1.47
RRP1-202ENST00000471909 UHRF1BP1Q6BDS2 1440 aa24.2■■□□□ 1.47
RRP1-202ENST00000471909 ERBINQ96RT1 1412 aa24.2■■□□□ 1.47
RRP1-202ENST00000471909 AFAP1Q8N556 730 aa24.18■■□□□ 1.46
RRP1-202ENST00000471909 ASXL2Q76L83 1435 aa24.17■■□□□ 1.46
RRP1-202ENST00000471909 IQGAP3Q86VI3 1631 aa24.16■■□□□ 1.46
RRP1-202ENST00000471909 SPAG9O60271 1321 aaKnown RBP24.16■■□□□ 1.46
RRP1-202ENST00000471909 ABCA9Q8IUA7 1624 aa24.16■■□□□ 1.46
RRP1-202ENST00000471909 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
RRP1-202ENST00000471909 PLA2R1Q13018 1463 aa24.15■■□□□ 1.46
RRP1-202ENST00000471909 CNTLNQ9NXG0 1405 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms