RNA–Protein interactions for RNA: ENST00000471868.1

SUPT20H-209, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-209ENST00000471868 STK25O00506 426 aa9.04□□□□□ -0.96
SUPT20H-209ENST00000471868 STK24Q9Y6E0 443 aa9.03□□□□□ -0.96
SUPT20H-209ENST00000471868 HOXB3P14651 431 aaPredicted RBP9.02□□□□□ -0.97
SUPT20H-209ENST00000471868 HOXB1P14653 301 aaPredicted RBP9.02□□□□□ -0.97
SUPT20H-209ENST00000471868 SOX12O15370 315 aa9.01□□□□□ -0.97
SUPT20H-209ENST00000471868 RNF166Q96A37 237 aaPredicted RBP8.99□□□□□ -0.97
SUPT20H-209ENST00000471868 ZNF710Q8N1W2 664 aa8.97□□□□□ -0.97
SUPT20H-209ENST00000471868 G3V3G9 751 aa8.96□□□□□ -0.98
SUPT20H-209ENST00000471868 DOK7Q18PE1 504 aa8.96□□□□□ -0.98
SUPT20H-209ENST00000471868 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
SUPT20H-209ENST00000471868 BOLA1Q9Y3E2 137 aa8.96□□□□□ -0.98
SUPT20H-209ENST00000471868 ERBB3P21860 1342 aa8.96□□□□□ -0.98
SUPT20H-209ENST00000471868 NLRP6P59044 892 aa8.95□□□□□ -0.98
SUPT20H-209ENST00000471868 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
SUPT20H-209ENST00000471868 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
SUPT20H-209ENST00000471868 DPY19L2Q6NUT2 758 aa8.94□□□□□ -0.98
SUPT20H-209ENST00000471868 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
SUPT20H-209ENST00000471868 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
SUPT20H-209ENST00000471868 CHGAP10645 457 aaKnown RBP8.92□□□□□ -0.98
SUPT20H-209ENST00000471868 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
SUPT20H-209ENST00000471868 RIMBP2O15034 1052 aa8.91□□□□□ -0.98
SUPT20H-209ENST00000471868 PTGER2P43116 358 aa8.91□□□□□ -0.98
SUPT20H-209ENST00000471868 MS4A4AQ96JQ5 239 aa8.91□□□□□ -0.98
SUPT20H-209ENST00000471868 MFRPQ9BY79 579 aa8.91□□□□□ -0.98
SUPT20H-209ENST00000471868 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
SUPT20H-209ENST00000471868 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
SUPT20H-209ENST00000471868 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
SUPT20H-209ENST00000471868 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
SUPT20H-209ENST00000471868 MICALL2Q8IY33 904 aa8.86□□□□□ -0.99
SUPT20H-209ENST00000471868 DNAJC5Q9H3Z4 198 aa8.86□□□□□ -0.99
SUPT20H-209ENST00000471868 RSF1Q96T23 1441 aaPredicted RBP8.84□□□□□ -0.99
SUPT20H-209ENST00000471868 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
SUPT20H-209ENST00000471868 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
SUPT20H-209ENST00000471868 BAZ1AQ9NRL2 1556 aaPredicted RBP8.82□□□□□ -1
SUPT20H-209ENST00000471868 GPR153Q6NV75 609 aa8.79□□□□□ -1
SUPT20H-209ENST00000471868 NKX1-1Q15270 411 aaPredicted RBP8.78□□□□□ -1
SUPT20H-209ENST00000471868 PPP1R37O75864 691 aa8.74□□□□□ -1.01
SUPT20H-209ENST00000471868 TMEM92Q6UXU6 159 aa8.74□□□□□ -1.01
SUPT20H-209ENST00000471868 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
SUPT20H-209ENST00000471868 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
SUPT20H-209ENST00000471868 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
SUPT20H-209ENST00000471868 UNC13AQ9UPW8 1703 aa8.7□□□□□ -1.02
SUPT20H-209ENST00000471868 MROH2BQ7Z745 1585 aa8.69□□□□□ -1.02
SUPT20H-209ENST00000471868 BICRAQ9NZM4 1560 aa8.69□□□□□ -1.02
SUPT20H-209ENST00000471868 TMC2Q8TDI7 906 aa8.69□□□□□ -1.02
SUPT20H-209ENST00000471868 ZNF316A6NFI3 1004 aaPredicted RBP8.68□□□□□ -1.02
SUPT20H-209ENST00000471868 KIF3CO14782 793 aa8.68□□□□□ -1.02
SUPT20H-209ENST00000471868 GTPBP6O43824 516 aaPredicted RBP8.68□□□□□ -1.02
SUPT20H-209ENST00000471868 BBXQ8WY36 941 aaPredicted RBP8.68□□□□□ -1.02
SUPT20H-209ENST00000471868 SMARCA4P51532 1647 aa8.67□□□□□ -1.02
SUPT20H-209ENST00000471868 ARSIQ5FYB1 569 aa8.67□□□□□ -1.02
SUPT20H-209ENST00000471868 PEG3Q9GZU2 1588 aa8.67□□□□□ -1.02
SUPT20H-209ENST00000471868 C2orf72A6NCS6 295 aa8.66□□□□□ -1.02
SUPT20H-209ENST00000471868 PBX2P40425 430 aa8.65□□□□□ -1.02
SUPT20H-209ENST00000471868 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
SUPT20H-209ENST00000471868 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
SUPT20H-209ENST00000471868 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
SUPT20H-209ENST00000471868 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
SUPT20H-209ENST00000471868 SMARCA2P51531 1590 aa8.61□□□□□ -1.03
SUPT20H-209ENST00000471868 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
SUPT20H-209ENST00000471868 WIZO95785 1651 aa8.59□□□□□ -1.03
SUPT20H-209ENST00000471868 FOXK1P85037 733 aa8.58□□□□□ -1.04
SUPT20H-209ENST00000471868 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.04
SUPT20H-209ENST00000471868 CRISPLD2Q9H0B8 497 aa8.57□□□□□ -1.04
SUPT20H-209ENST00000471868 SLC34A2O95436 690 aa8.56□□□□□ -1.04
SUPT20H-209ENST00000471868 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
SUPT20H-209ENST00000471868 PDE4AP27815 886 aa8.55□□□□□ -1.04
SUPT20H-209ENST00000471868 ATAD2BQ9ULI0 1458 aa8.54□□□□□ -1.04
SUPT20H-209ENST00000471868 DSG2Q14126 1118 aa8.54□□□□□ -1.04
SUPT20H-209ENST00000471868 PLPP6Q8IY26 295 aa8.54□□□□□ -1.04
SUPT20H-209ENST00000471868 NCKAP5LQ9HCH0 1330 aa8.54□□□□□ -1.04
SUPT20H-209ENST00000471868 NCAPD3P42695 1498 aa8.53□□□□□ -1.04
SUPT20H-209ENST00000471868 POTEEQ6S8J3 1075 aa8.53□□□□□ -1.04
SUPT20H-209ENST00000471868 PPP1R15BQ5SWA1 713 aa8.52□□□□□ -1.05
SUPT20H-209ENST00000471868 HMGXB3Q12766 1538 aa8.51□□□□□ -1.05
SUPT20H-209ENST00000471868 PCDHGA4Q9Y5G9 962 aa8.51□□□□□ -1.05
SUPT20H-209ENST00000471868 CCDC88BA6NC98 1476 aa8.51□□□□□ -1.05
SUPT20H-209ENST00000471868 NUDT7P0C024 238 aa8.5□□□□□ -1.05
SUPT20H-209ENST00000471868 PAXIP1Q6ZW49 1069 aaPredicted RBP8.5□□□□□ -1.05
SUPT20H-209ENST00000471868 DDX27Q96GQ7 796 aaKnown RBP8.5□□□□□ -1.05
SUPT20H-209ENST00000471868 CFAP44Q96MT7 982 aa8.5□□□□□ -1.05
SUPT20H-209ENST00000471868 BAZ1BQ9UIG0 1483 aaKnown RBP8.5□□□□□ -1.05
SUPT20H-209ENST00000471868 MFSD10Q14728 455 aa8.49□□□□□ -1.05
SUPT20H-209ENST00000471868 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
SUPT20H-209ENST00000471868 PTCD2Q8WV60 388 aaKnown RBP8.49□□□□□ -1.05
SUPT20H-209ENST00000471868 LHX6Q9UPM6 363 aa8.49□□□□□ -1.05
SUPT20H-209ENST00000471868 AXIN2Q9Y2T1 843 aa8.49□□□□□ -1.05
SUPT20H-209ENST00000471868 CADPS2Q86UW7 1296 aa8.48□□□□□ -1.05
SUPT20H-209ENST00000471868 LARP6Q9BRS8 491 aaKnown RBP8.48□□□□□ -1.05
SUPT20H-209ENST00000471868 PSDA5PKW4 1024 aaPredicted RBP8.47□□□□□ -1.05
SUPT20H-209ENST00000471868 TK2O00142 265 aa8.47□□□□□ -1.05
SUPT20H-209ENST00000471868 ARHGAP33O14559 1287 aa8.47□□□□□ -1.05
SUPT20H-209ENST00000471868 RGS20O76081 388 aa8.47□□□□□ -1.05
SUPT20H-209ENST00000471868 EIF4G1Q04637 1599 aaKnown RBP8.47□□□□□ -1.05
SUPT20H-209ENST00000471868 TBC1D12O60347 775 aa8.46□□□□□ -1.06
SUPT20H-209ENST00000471868 EEA1Q15075 1411 aa8.45□□□□□ -1.06
SUPT20H-209ENST00000471868 HRO43593 1189 aa8.43□□□□□ -1.06
SUPT20H-209ENST00000471868 OXER1Q8TDS5 423 aa8.43□□□□□ -1.06
SUPT20H-209ENST00000471868 UPF1Q92900 1129 aaKnown RBP eCLIP8.42□□□□□ -1.06
SUPT20H-209ENST00000471868 IFFO2Q5TF58 517 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms