RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 PHF8Q9UPP1 1060 aa7.91□□□□□ -1.14
LRCH3-213ENST00000471667 SCRIBQ14160 1630 aa7.91□□□□□ -1.14
LRCH3-213ENST00000471667 HOXB3P14651 431 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-213ENST00000471667 BCL11BQ9C0K0 894 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-213ENST00000471667 ECM2O94769 699 aaPredicted RBP7.88□□□□□ -1.15
LRCH3-213ENST00000471667 FAM205CA6NFA0 338 aa7.87□□□□□ -1.15
LRCH3-213ENST00000471667 TMEM92Q6UXU6 159 aa7.87□□□□□ -1.15
LRCH3-213ENST00000471667 STK24Q9Y6E0 443 aa7.87□□□□□ -1.15
LRCH3-213ENST00000471667 POTEB3A0JP26 581 aa7.86□□□□□ -1.15
LRCH3-213ENST00000471667 NLRP6P59044 892 aa7.86□□□□□ -1.15
LRCH3-213ENST00000471667 DOK7Q18PE1 504 aa7.86□□□□□ -1.15
LRCH3-213ENST00000471667 POTEBQ6S5H4 581 aa7.86□□□□□ -1.15
LRCH3-213ENST00000471667 ZNF710Q8N1W2 664 aa7.86□□□□□ -1.15
LRCH3-213ENST00000471667 HS3ST6Q96QI5 342 aa7.86□□□□□ -1.15
LRCH3-213ENST00000471667 STK25O00506 426 aa7.85□□□□□ -1.15
LRCH3-213ENST00000471667 PKD2Q13563 968 aa7.85□□□□□ -1.15
LRCH3-213ENST00000471667 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
LRCH3-213ENST00000471667 FBXO22Q8NEZ5 403 aa7.84□□□□□ -1.15
LRCH3-213ENST00000471667 RGL2O15211 777 aa7.83□□□□□ -1.16
LRCH3-213ENST00000471667 SPNS2Q8IVW8 549 aa7.83□□□□□ -1.16
LRCH3-213ENST00000471667 RIMBP2O15034 1052 aa7.82□□□□□ -1.16
LRCH3-213ENST00000471667 THOC2Q8NI27 1593 aaKnown RBP7.82□□□□□ -1.16
LRCH3-213ENST00000471667 MFRPQ9BY79 579 aa7.82□□□□□ -1.16
LRCH3-213ENST00000471667 BAZ1AQ9NRL2 1556 aaPredicted RBP7.81□□□□□ -1.16
LRCH3-213ENST00000471667 MMRN1Q13201 1228 aa7.8□□□□□ -1.16
LRCH3-213ENST00000471667 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
LRCH3-213ENST00000471667 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
LRCH3-213ENST00000471667 ERBB3P21860 1342 aa7.78□□□□□ -1.16
LRCH3-213ENST00000471667 ZSWIM6Q9HCJ5 1215 aa7.78□□□□□ -1.16
LRCH3-213ENST00000471667 SMARCA2P51531 1590 aa7.77□□□□□ -1.17
LRCH3-213ENST00000471667 CYB5RLQ6IPT4 315 aa7.77□□□□□ -1.17
LRCH3-213ENST00000471667 RIMBP3CA6NJZ7 1639 aa7.77□□□□□ -1.17
LRCH3-213ENST00000471667 RIMBP3BA6NNM3 1639 aa7.77□□□□□ -1.17
LRCH3-213ENST00000471667 RIMBP3Q9UFD9 1639 aa7.77□□□□□ -1.17
LRCH3-213ENST00000471667 NESP48681 1621 aa7.76□□□□□ -1.17
LRCH3-213ENST00000471667 PDS5BQ9NTI5 1447 aa7.76□□□□□ -1.17
LRCH3-213ENST00000471667 VARS2Q5ST30 1063 aaKnown RBP7.74□□□□□ -1.17
LRCH3-213ENST00000471667 GPR153Q6NV75 609 aa7.74□□□□□ -1.17
LRCH3-213ENST00000471667 NCAPD3P42695 1498 aa7.74□□□□□ -1.17
LRCH3-213ENST00000471667 ARSIQ5FYB1 569 aa7.72□□□□□ -1.17
LRCH3-213ENST00000471667 ARHGEF11O15085 1522 aa7.72□□□□□ -1.17
LRCH3-213ENST00000471667 C2orf72A6NCS6 295 aa7.71□□□□□ -1.18
LRCH3-213ENST00000471667 KIF3CO14782 793 aa7.71□□□□□ -1.18
LRCH3-213ENST00000471667 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
LRCH3-213ENST00000471667 PPP1R37O75864 691 aa7.69□□□□□ -1.18
LRCH3-213ENST00000471667 KHSRPQ92945 711 aaKnown RBP eCLIP7.69□□□□□ -1.183e-9■■□□□ 12.1
LRCH3-213ENST00000471667 DCAF1Q9Y4B6 1507 aa7.68□□□□□ -1.18
LRCH3-213ENST00000471667 ZNF687Q8N1G0 1237 aa7.68□□□□□ -1.18
LRCH3-213ENST00000471667 HS6ST3Q8IZP7 471 aa7.67□□□□□ -1.18
LRCH3-213ENST00000471667 TMC2Q8TDI7 906 aa7.67□□□□□ -1.18
LRCH3-213ENST00000471667 MRC2Q9UBG0 1479 aa7.66□□□□□ -1.18
LRCH3-213ENST00000471667 ZNF316A6NFI3 1004 aaPredicted RBP7.65□□□□□ -1.18
LRCH3-213ENST00000471667 SLC34A2O95436 690 aa7.63□□□□□ -1.19
LRCH3-213ENST00000471667 NUDT7P0C024 238 aa7.63□□□□□ -1.19
LRCH3-213ENST00000471667 CHGAP10645 457 aaKnown RBP7.63□□□□□ -1.19
LRCH3-213ENST00000471667 HMGXB3Q12766 1538 aa7.62□□□□□ -1.19
LRCH3-213ENST00000471667 PCDHGA4Q9Y5G9 962 aa7.62□□□□□ -1.19
LRCH3-213ENST00000471667 KIF21AQ7Z4S6 1674 aa7.62□□□□□ -1.19
LRCH3-213ENST00000471667 WDR62O43379 1518 aa7.62□□□□□ -1.19
LRCH3-213ENST00000471667 ATAD2BQ9ULI0 1458 aa7.61□□□□□ -1.19
LRCH3-213ENST00000471667 RNF166Q96A37 237 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-213ENST00000471667 LHX6Q9UPM6 363 aa7.59□□□□□ -1.19
LRCH3-213ENST00000471667 ANKRD13DQ6ZTN6 518 aa7.58□□□□□ -1.2
LRCH3-213ENST00000471667 MYT1LQ9UL68 1186 aa7.58□□□□□ -1.2
LRCH3-213ENST00000471667 ZCCHC6Q5VYS8 1495 aaKnown RBP7.57□□□□□ -1.2
LRCH3-213ENST00000471667 LMTK3Q96Q04 1460 aa7.57□□□□□ -1.2
LRCH3-213ENST00000471667 ARAP1Q96P48 1450 aa7.56□□□□□ -1.2
LRCH3-213ENST00000471667 FOXK1P85037 733 aa7.56□□□□□ -1.2
LRCH3-213ENST00000471667 NKX1-1Q15270 411 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-213ENST00000471667 GPHNQ9NQX3 736 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-213ENST00000471667 BAZ1BQ9UIG0 1483 aaKnown RBP7.55□□□□□ -1.2
LRCH3-213ENST00000471667 PTGER2P43116 358 aa7.55□□□□□ -1.2
LRCH3-213ENST00000471667 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
LRCH3-213ENST00000471667 PLPP6Q8IY26 295 aa7.55□□□□□ -1.2
LRCH3-213ENST00000471667 FBXO41Q8TF61 875 aa7.55□□□□□ -1.2
LRCH3-213ENST00000471667 PBX2P40425 430 aa7.54□□□□□ -1.2
LRCH3-213ENST00000471667 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
LRCH3-213ENST00000471667 SOCS7O14512 581 aa7.53□□□□□ -1.2
LRCH3-213ENST00000471667 DSG2Q14126 1118 aa7.53□□□□□ -1.2
LRCH3-213ENST00000471667 POTEEQ6S8J3 1075 aa7.53□□□□□ -1.2
LRCH3-213ENST00000471667 RYDENQ9NUL5 291 aaKnown RBP7.53□□□□□ -1.2
LRCH3-213ENST00000471667 RSF1Q96T23 1441 aaPredicted RBP7.52□□□□□ -1.2
LRCH3-213ENST00000471667 KDM4FA0A1W2PPD8 638 aa7.52□□□□□ -1.21
LRCH3-213ENST00000471667 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
LRCH3-213ENST00000471667 CEP164Q9UPV0 1460 aa7.51□□□□□ -1.21
LRCH3-213ENST00000471667 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
LRCH3-213ENST00000471667 PSDA5PKW4 1024 aaPredicted RBP7.51□□□□□ -1.21
LRCH3-213ENST00000471667 TBC1D12O60347 775 aa7.48□□□□□ -1.21
LRCH3-213ENST00000471667 ERCC6L2Q5T890 1561 aa7.48□□□□□ -1.21
LRCH3-213ENST00000471667 CRISPLD2Q9H0B8 497 aa7.48□□□□□ -1.21
LRCH3-213ENST00000471667 ARHGAP33O14559 1287 aa7.47□□□□□ -1.21
LRCH3-213ENST00000471667 GTPBP6O43824 516 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-213ENST00000471667 PPP4R3BQ5MIZ7 849 aa7.45□□□□□ -1.22
LRCH3-213ENST00000471667 OXER1Q8TDS5 423 aa7.45□□□□□ -1.22
LRCH3-213ENST00000471667 UPF1Q92900 1129 aaKnown RBP eCLIP7.45□□□□□ -1.22
LRCH3-213ENST00000471667 PPP1R15BQ5SWA1 713 aa7.44□□□□□ -1.22
LRCH3-213ENST00000471667 ADGRD1Q6QNK2 874 aa7.44□□□□□ -1.22
LRCH3-213ENST00000471667 PSEN2P49810 448 aa7.43□□□□□ -1.22
LRCH3-213ENST00000471667 DMRTA1Q5VZB9 504 aa7.43□□□□□ -1.22
LRCH3-213ENST00000471667 NCKAP5LQ9HCH0 1330 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms