RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 NCKAP5LQ9HCH0 1330 aa8.76□□□□□ -1.01
PRPF3-204ENST00000470824 SEC24BO95487 1268 aa8.75□□□□□ -1.01
PRPF3-204ENST00000470824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.011e-10■■■□□ 14.7
PRPF3-204ENST00000470824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.74□□□□□ -1.01
PRPF3-204ENST00000470824 CRISPLD2Q9H0B8 497 aa8.74□□□□□ -1.01
PRPF3-204ENST00000470824 POTEFA5A3E0 1075 aa8.73□□□□□ -1.01
PRPF3-204ENST00000470824 MFSD10Q14728 455 aa8.73□□□□□ -1.01
PRPF3-204ENST00000470824 LMOD2Q6P5Q4 547 aa8.73□□□□□ -1.01
PRPF3-204ENST00000470824 ILDR1Q86SU0 546 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-204ENST00000470824 FAM163AQ96GL9 167 aaPredicted RBP8.72□□□□□ -1.01
PRPF3-204ENST00000470824 DDX27Q96GQ7 796 aaKnown RBP8.72□□□□□ -1.01
PRPF3-204ENST00000470824 TRIM35Q9UPQ4 493 aa8.72□□□□□ -1.01
PRPF3-204ENST00000470824 COLQQ9Y215 455 aaPredicted RBP8.7□□□□□ -1.02
PRPF3-204ENST00000470824 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-204ENST00000470824 SEMA3EO15041 775 aa8.67□□□□□ -1.02
PRPF3-204ENST00000470824 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-204ENST00000470824 CAMK2BQ13554 666 aa8.66□□□□□ -1.02
PRPF3-204ENST00000470824 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
PRPF3-204ENST00000470824 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
PRPF3-204ENST00000470824 SMYD5Q6GMV2 418 aa8.65□□□□□ -1.02
PRPF3-204ENST00000470824 IER5LQ5T953 404 aa8.64□□□□□ -1.03
PRPF3-204ENST00000470824 DPY19L2Q6NUT2 758 aa8.64□□□□□ -1.03
PRPF3-204ENST00000470824 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
PRPF3-204ENST00000470824 OCEL1Q9H607 264 aa8.62□□□□□ -1.03
PRPF3-204ENST00000470824 PLCG2P16885 1265 aa8.61□□□□□ -1.03
PRPF3-204ENST00000470824 MICALL2Q8IY33 904 aa8.61□□□□□ -1.03
PRPF3-204ENST00000470824 PCDH10Q9P2E7 1040 aa8.61□□□□□ -1.03
PRPF3-204ENST00000470824 G3V3G9 751 aa8.6□□□□□ -1.03
PRPF3-204ENST00000470824 IRX5P78411 483 aaPredicted RBP8.6□□□□□ -1.03
PRPF3-204ENST00000470824 PDCD7Q8N8D1 485 aaKnown RBP8.6□□□□□ -1.03
PRPF3-204ENST00000470824 TMC2Q8TDI7 906 aa8.6□□□□□ -1.03
PRPF3-204ENST00000470824 ZC3H15Q8WU90 426 aaKnown RBP8.59□□□□□ -1.03
PRPF3-204ENST00000470824 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
PRPF3-204ENST00000470824 DSG2Q14126 1118 aa8.57□□□□□ -1.04
PRPF3-204ENST00000470824 BOLA1Q9Y3E2 137 aa8.57□□□□□ -1.04
PRPF3-204ENST00000470824 FOXK1P85037 733 aa8.56□□□□□ -1.04
PRPF3-204ENST00000470824 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
PRPF3-204ENST00000470824 L3MBTL3Q96JM7 780 aaPredicted RBP8.55□□□□□ -1.04
PRPF3-204ENST00000470824 SPDYE16A6NNV3 312 aaPredicted RBP8.54□□□□□ -1.04
PRPF3-204ENST00000470824 EMILIN3Q9NT22 766 aa8.54□□□□□ -1.04
PRPF3-204ENST00000470824 DPYSL4O14531 572 aa8.53□□□□□ -1.04
PRPF3-204ENST00000470824 C2orf72A6NCS6 295 aa8.52□□□□□ -1.05
PRPF3-204ENST00000470824 PLPP6Q8IY26 295 aa8.52□□□□□ -1.05
PRPF3-204ENST00000470824 TMEM132AQ24JP5 1023 aa8.51□□□□□ -1.05
PRPF3-204ENST00000470824 KIF3CO14782 793 aa8.5□□□□□ -1.05
PRPF3-204ENST00000470824 ZMYND10O75800 440 aa8.5□□□□□ -1.05
PRPF3-204ENST00000470824 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
PRPF3-204ENST00000470824 PDIA6Q15084 440 aa8.5□□□□□ -1.05
PRPF3-204ENST00000470824 ST18O60284 1047 aa8.49□□□□□ -1.05
PRPF3-204ENST00000470824 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
PRPF3-204ENST00000470824 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
PRPF3-204ENST00000470824 RBM26Q5T8P6 1007 aaKnown RBP8.48□□□□□ -1.05
PRPF3-204ENST00000470824 MAP3K9P80192 1104 aa8.47□□□□□ -1.05
PRPF3-204ENST00000470824 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
PRPF3-204ENST00000470824 BRPF1P55201 1214 aaPredicted RBP8.46□□□□□ -1.06
PRPF3-204ENST00000470824 GPIHBP1Q8IV16 184 aa8.46□□□□□ -1.06
PRPF3-204ENST00000470824 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
PRPF3-204ENST00000470824 NEUROD2Q15784 382 aa8.44□□□□□ -1.06
PRPF3-204ENST00000470824 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
PRPF3-204ENST00000470824 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
PRPF3-204ENST00000470824 TMEM92Q6UXU6 159 aa8.42□□□□□ -1.06
PRPF3-204ENST00000470824 C3orf67Q6ZVT6 689 aa8.42□□□□□ -1.06
PRPF3-204ENST00000470824 OXER1Q8TDS5 423 aa8.41□□□□□ -1.06
PRPF3-204ENST00000470824 UPF1Q92900 1129 aaKnown RBP eCLIP8.41□□□□□ -1.06
PRPF3-204ENST00000470824 AK7Q96M32 723 aa8.41□□□□□ -1.06
PRPF3-204ENST00000470824 GRXCR2A6NFK2 248 aa8.4□□□□□ -1.06
PRPF3-204ENST00000470824 TBC1D12O60347 775 aa8.4□□□□□ -1.06
PRPF3-204ENST00000470824 SNPHO15079 494 aa8.39□□□□□ -1.07
PRPF3-204ENST00000470824 MARVELD3Q96A59 401 aa8.39□□□□□ -1.07
PRPF3-204ENST00000470824 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
PRPF3-204ENST00000470824 PTGER2P43116 358 aa8.36□□□□□ -1.07
PRPF3-204ENST00000470824 NUTM2FA1L443 756 aa8.35□□□□□ -1.07
PRPF3-204ENST00000470824 ZNF316A6NFI3 1004 aaPredicted RBP8.35□□□□□ -1.07
PRPF3-204ENST00000470824 EVI5O60447 810 aa8.34□□□□□ -1.07
PRPF3-204ENST00000470824 OSBPP22059 807 aa8.34□□□□□ -1.07
PRPF3-204ENST00000470824 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.07
PRPF3-204ENST00000470824 DDX12PQ92771 950 aa8.33□□□□□ -1.08
PRPF3-204ENST00000470824 GPR37O15354 613 aa8.32□□□□□ -1.08
PRPF3-204ENST00000470824 DAXXQ9UER7 740 aaPredicted RBP8.32□□□□□ -1.08
PRPF3-204ENST00000470824 TRIM66O15016 1216 aa8.31□□□□□ -1.08
PRPF3-204ENST00000470824 SLC34A2O95436 690 aa8.31□□□□□ -1.08
PRPF3-204ENST00000470824 EMP3P54852 163 aa8.31□□□□□ -1.08
PRPF3-204ENST00000470824 MINK1Q8N4C8 1332 aaPredicted RBP8.3□□□□□ -1.08
PRPF3-204ENST00000470824 FCHSD2O94868 740 aa8.3□□□□□ -1.08
PRPF3-204ENST00000470824 GNPATO15228 680 aa8.29□□□□□ -1.08
PRPF3-204ENST00000470824 PDE4DQ08499 809 aa8.29□□□□□ -1.08
PRPF3-204ENST00000470824 HIC1Q14526 733 aa8.29□□□□□ -1.08
PRPF3-204ENST00000470824 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
PRPF3-204ENST00000470824 TIMELESSQ9UNS1 1208 aa8.29□□□□□ -1.08
PRPF3-204ENST00000470824 MAP2K5Q13163 448 aa8.28□□□□□ -1.08
PRPF3-204ENST00000470824 IRF6O14896 467 aa8.27□□□□□ -1.09
PRPF3-204ENST00000470824 MMRN1Q13201 1228 aa8.27□□□□□ -1.09
PRPF3-204ENST00000470824 SPNS2Q8IVW8 549 aa8.27□□□□□ -1.09
PRPF3-204ENST00000470824 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
PRPF3-204ENST00000470824 EPAS1Q99814 870 aa8.26□□□□□ -1.09
PRPF3-204ENST00000470824 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
PRPF3-204ENST00000470824 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
PRPF3-204ENST00000470824 PHF14O94880 888 aa8.24□□□□□ -1.09
PRPF3-204ENST00000470824 CCDC102AQ96A19 550 aa8.24□□□□□ -1.09
PRPF3-204ENST00000470824 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms