RNA–Protein interactions for RNA: ENST00000470347.1

SYPL1-205, Transcript of synaptophysin like 1, humanhuman

TSL 3 BASIC

Gene SYPL1, Length 1,193 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-205ENST00000470347 RIMBP2O15034 1052 aa14.14□□□□□ -0.15
SYPL1-205ENST00000470347 NLRP6P59044 892 aa14.13□□□□□ -0.15
SYPL1-205ENST00000470347 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
SYPL1-205ENST00000470347 ZSWIM6Q9HCJ5 1215 aa14.1□□□□□ -0.15
SYPL1-205ENST00000470347 STK24Q9Y6E0 443 aa14.1□□□□□ -0.15
SYPL1-205ENST00000470347 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
SYPL1-205ENST00000470347 ERBB3P21860 1342 aa14.08□□□□□ -0.16
SYPL1-205ENST00000470347 MFRPQ9BY79 579 aa14.06□□□□□ -0.16
SYPL1-205ENST00000470347 STK25O00506 426 aa14.05□□□□□ -0.16
SYPL1-205ENST00000470347 PKD2Q13563 968 aa14.04□□□□□ -0.16
SYPL1-205ENST00000470347 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
SYPL1-205ENST00000470347 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
SYPL1-205ENST00000470347 RGL2O15211 777 aa13.99□□□□□ -0.17
SYPL1-205ENST00000470347 KIF3CO14782 793 aa13.94□□□□□ -0.18
SYPL1-205ENST00000470347 ZNF687Q8N1G0 1237 aa13.94□□□□□ -0.18
SYPL1-205ENST00000470347 ARSIQ5FYB1 569 aa13.93□□□□□ -0.18
SYPL1-205ENST00000470347 C2orf72A6NCS6 295 aa13.89□□□□□ -0.19
SYPL1-205ENST00000470347 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
SYPL1-205ENST00000470347 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
SYPL1-205ENST00000470347 PPP1R37O75864 691 aa13.8□□□□□ -0.2
SYPL1-205ENST00000470347 SLC34A2O95436 690 aa13.8□□□□□ -0.2
SYPL1-205ENST00000470347 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
SYPL1-205ENST00000470347 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
SYPL1-205ENST00000470347 NUDT7P0C024 238 aa13.75□□□□□ -0.21
SYPL1-205ENST00000470347 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
SYPL1-205ENST00000470347 PCDHGA4Q9Y5G9 962 aa13.74□□□□□ -0.21
SYPL1-205ENST00000470347 PTGER2P43116 358 aa13.72□□□□□ -0.21
SYPL1-205ENST00000470347 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
SYPL1-205ENST00000470347 LHX6Q9UPM6 363 aa13.7□□□□□ -0.22
SYPL1-205ENST00000470347 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
SYPL1-205ENST00000470347 LSM11P83369 360 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYPL1-205ENST00000470347 PBX2P40425 430 aa13.66□□□□□ -0.22
SYPL1-205ENST00000470347 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
SYPL1-205ENST00000470347 FOXK1P85037 733 aa13.63□□□□□ -0.23
SYPL1-205ENST00000470347 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
SYPL1-205ENST00000470347 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
SYPL1-205ENST00000470347 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
SYPL1-205ENST00000470347 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
SYPL1-205ENST00000470347 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
SYPL1-205ENST00000470347 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
SYPL1-205ENST00000470347 PLPP6Q8IY26 295 aa13.58□□□□□ -0.24
SYPL1-205ENST00000470347 PSDA5PKW4 1024 aaPredicted RBP13.57□□□□□ -0.24
SYPL1-205ENST00000470347 DSG2Q14126 1118 aa13.55□□□□□ -0.24
SYPL1-205ENST00000470347 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
SYPL1-205ENST00000470347 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
SYPL1-205ENST00000470347 RYDENQ9NUL5 291 aaKnown RBP13.48□□□□□ -0.25
SYPL1-205ENST00000470347 TBC1D12O60347 775 aa13.47□□□□□ -0.25
SYPL1-205ENST00000470347 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
SYPL1-205ENST00000470347 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
SYPL1-205ENST00000470347 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
SYPL1-205ENST00000470347 TK2O00142 265 aa13.42□□□□□ -0.26
SYPL1-205ENST00000470347 PSEN2P49810 448 aa13.41□□□□□ -0.26
SYPL1-205ENST00000470347 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
SYPL1-205ENST00000470347 OXER1Q8TDS5 423 aa13.41□□□□□ -0.26
SYPL1-205ENST00000470347 HRO43593 1189 aa13.39□□□□□ -0.27
SYPL1-205ENST00000470347 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
SYPL1-205ENST00000470347 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
SYPL1-205ENST00000470347 NCKAP5LQ9HCH0 1330 aa13.35□□□□□ -0.27
SYPL1-205ENST00000470347 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.27
SYPL1-205ENST00000470347 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
SYPL1-205ENST00000470347 ABCC9O60706 1549 aa13.33□□□□□ -0.28
SYPL1-205ENST00000470347 CCDC180Q9P1Z9 1646 aa13.32□□□□□ -0.28
SYPL1-205ENST00000470347 PDE4AP27815 886 aa13.32□□□□□ -0.28
SYPL1-205ENST00000470347 KCNK17Q96T54 332 aa13.3□□□□□ -0.28
SYPL1-205ENST00000470347 ZNF454Q8N9F8 522 aa13.28□□□□□ -0.28
SYPL1-205ENST00000470347 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
SYPL1-205ENST00000470347 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
SYPL1-205ENST00000470347 PLA2G2EQ9NZK7 142 aa13.27□□□□□ -0.29
SYPL1-205ENST00000470347 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
SYPL1-205ENST00000470347 FOSBP53539 338 aa13.25□□□□□ -0.29
SYPL1-205ENST00000470347 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
SYPL1-205ENST00000470347 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
SYPL1-205ENST00000470347 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
SYPL1-205ENST00000470347 DDX27Q96GQ7 796 aaKnown RBP13.22□□□□□ -0.29
SYPL1-205ENST00000470347 STAC3Q96MF2 364 aa13.22□□□□□ -0.29
SYPL1-205ENST00000470347 MFSD10Q14728 455 aa13.21□□□□□ -0.29
SYPL1-205ENST00000470347 KCTD12Q96CX2 325 aaKnown RBP13.21□□□□□ -0.29
SYPL1-205ENST00000470347 EVI5O60447 810 aa13.2□□□□□ -0.3
SYPL1-205ENST00000470347 JPH4Q96JJ6 628 aa13.2□□□□□ -0.3
SYPL1-205ENST00000470347 PTPREP23469 700 aa13.18□□□□□ -0.3
SYPL1-205ENST00000470347 BHMG1C9JSJ3 638 aaPredicted RBP13.16□□□□□ -0.3
SYPL1-205ENST00000470347 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
SYPL1-205ENST00000470347 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
SYPL1-205ENST00000470347 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
SYPL1-205ENST00000470347 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
SYPL1-205ENST00000470347 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
SYPL1-205ENST00000470347 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
SYPL1-205ENST00000470347 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
SYPL1-205ENST00000470347 PTPN5P54829 565 aa13.07□□□□□ -0.32
SYPL1-205ENST00000470347 THSD4Q6ZMP0 1018 aa13.06□□□□□ -0.32
SYPL1-205ENST00000470347 PCDHGA10Q9Y5H3 936 aa13.06□□□□□ -0.32
SYPL1-205ENST00000470347 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
SYPL1-205ENST00000470347 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
SYPL1-205ENST00000470347 WNT2BQ93097 391 aa13.02□□□□□ -0.33
SYPL1-205ENST00000470347 NBPF3Q9H094 633 aa13.02□□□□□ -0.33
SYPL1-205ENST00000470347 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
SYPL1-205ENST00000470347 PHF14O94880 888 aa13□□□□□ -0.33
SYPL1-205ENST00000470347 CAMK2BQ13554 666 aa13□□□□□ -0.33
SYPL1-205ENST00000470347 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
SYPL1-205ENST00000470347 IFFO2Q5TF58 517 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms